RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 GSE1Q14687 1217 aa10.41□□□□□ -0.74
CTNNA1-216ENST00000519489 PRPF38BQ5VTL8 546 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-216ENST00000519489 RNF181Q9P0P0 153 aa10.41□□□□□ -0.74
CTNNA1-216ENST00000519489 TRAK1Q9UPV9 953 aa10.41□□□□□ -0.74
CTNNA1-216ENST00000519489 SLIT3O75094 1523 aa10.4□□□□□ -0.74
CTNNA1-216ENST00000519489 POTEJP0CG39 1038 aa10.4□□□□□ -0.74
CTNNA1-216ENST00000519489 DPEP1P16444 411 aa10.4□□□□□ -0.74
CTNNA1-216ENST00000519489 KCNA3P22001 575 aa10.4□□□□□ -0.74
CTNNA1-216ENST00000519489 ARHGEF25Q86VW2 580 aa10.4□□□□□ -0.74
CTNNA1-216ENST00000519489 CFAP44Q96MT7 982 aa10.4□□□□□ -0.74
CTNNA1-216ENST00000519489 EIF3AQ14152 1382 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-216ENST00000519489 PLEKHG3A1L390 1219 aa10.39□□□□□ -0.75
CTNNA1-216ENST00000519489 FCHSD2O94868 740 aa10.39□□□□□ -0.75
CTNNA1-216ENST00000519489 PYGBP11216 843 aa10.39□□□□□ -0.75
CTNNA1-216ENST00000519489 POTEFA5A3E0 1075 aa10.38□□□□□ -0.75
CTNNA1-216ENST00000519489 CSB-PGBD3P0DP91 1061 aa10.38□□□□□ -0.75
CTNNA1-216ENST00000519489 VEGFAP15692 232 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-216ENST00000519489 IER5LQ5T953 404 aa10.38□□□□□ -0.75
CTNNA1-216ENST00000519489 MCOLN1Q9GZU1 580 aa10.38□□□□□ -0.75
CTNNA1-216ENST00000519489 TRIM35Q9UPQ4 493 aa10.38□□□□□ -0.75
CTNNA1-216ENST00000519489 CPSF1Q10570 1443 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-216ENST00000519489 PKD1L3Q7Z443 1732 aa10.38□□□□□ -0.75
CTNNA1-216ENST00000519489 CCDC7Q96M83 1385 aa10.38□□□□□ -0.75
CTNNA1-216ENST00000519489 TNRC6CQ9HCJ0 1690 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-216ENST00000519489 ADGRB1O14514 1584 aa10.37□□□□□ -0.75
CTNNA1-216ENST00000519489 MAMSTRQ6ZN01 415 aa10.37□□□□□ -0.75
CTNNA1-216ENST00000519489 USP54Q70EL1 1684 aa10.37□□□□□ -0.75
CTNNA1-216ENST00000519489 LY75O60449 1722 aa10.36□□□□□ -0.75
CTNNA1-216ENST00000519489 NLRP6P59044 892 aa10.36□□□□□ -0.75
CTNNA1-216ENST00000519489 A0A0C4DFX4 3053 aa10.36□□□□□ -0.75
CTNNA1-216ENST00000519489 TOGARAM1Q9Y4F4 1720 aa10.36□□□□□ -0.75
CTNNA1-216ENST00000519489 N4BP2Q86UW6 1770 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-216ENST00000519489 ITGAEP38570 1179 aa10.35□□□□□ -0.75
CTNNA1-216ENST00000519489 TGFB2P61812 414 aa10.35□□□□□ -0.75
CTNNA1-216ENST00000519489 IFNLR1Q8IU57 520 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-216ENST00000519489 SYTL4Q96C24 671 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-216ENST00000519489 DCAF5Q96JK2 942 aa10.35□□□□□ -0.75
CTNNA1-216ENST00000519489 TMEM106CQ9BVX2 250 aa10.35□□□□□ -0.75
CTNNA1-216ENST00000519489 CDK19Q9BWU1 502 aa10.35□□□□□ -0.75
CTNNA1-216ENST00000519489 PASKQ96RG2 1323 aa10.34□□□□□ -0.75
CTNNA1-216ENST00000519489 GLTPD2A6NH11 291 aa10.34□□□□□ -0.75
CTNNA1-216ENST00000519489 DLL1O00548 723 aa10.34□□□□□ -0.75
CTNNA1-216ENST00000519489 PHF14O94880 888 aa10.34□□□□□ -0.75
CTNNA1-216ENST00000519489 IL2RBP14784 551 aa10.34□□□□□ -0.75
CTNNA1-216ENST00000519489 RASSF7Q02833 373 aa10.34□□□□□ -0.75
CTNNA1-216ENST00000519489 DDX54Q8TDD1 881 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-216ENST00000519489 TSKSQ9UJT2 592 aa10.34□□□□□ -0.75
CTNNA1-216ENST00000519489 ANKRD36BQ8N2N9 1353 aa10.34□□□□□ -0.75
CTNNA1-216ENST00000519489 PIK3C2AO00443 1686 aa10.34□□□□□ -0.75
CTNNA1-216ENST00000519489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-216ENST00000519489 MMP10P09238 476 aa10.33□□□□□ -0.76
CTNNA1-216ENST00000519489 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-216ENST00000519489 SOX10P56693 466 aa10.33□□□□□ -0.76
CTNNA1-216ENST00000519489 FLAD1Q8NFF5 587 aa10.33□□□□□ -0.76
CTNNA1-216ENST00000519489 CUL9Q8IWT3 2517 aa10.32□□□□□ -0.76
CTNNA1-216ENST00000519489 HABP4Q5JVS0 413 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-216ENST00000519489 SPOCK2Q92563 424 aa10.32□□□□□ -0.76
CTNNA1-216ENST00000519489 VIRMAQ69YN4 1812 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-216ENST00000519489 KDM6AO15550 1401 aaPredicted RBP10.32□□□□□ -0.76
CTNNA1-216ENST00000519489 SZT2Q5T011 3432 aa10.32□□□□□ -0.76
CTNNA1-216ENST00000519489 RGPD5Q99666 1765 aa10.31□□□□□ -0.76
CTNNA1-216ENST00000519489 SOX12O15370 315 aa10.31□□□□□ -0.76
CTNNA1-216ENST00000519489 SEC24BO95487 1268 aa10.31□□□□□ -0.76
CTNNA1-216ENST00000519489 ZNF467Q7Z7K2 595 aaPredicted RBP10.31□□□□□ -0.76
CTNNA1-216ENST00000519489 SCUBE2Q9NQ36 999 aa10.31□□□□□ -0.76
CTNNA1-216ENST00000519489 COLQQ9Y215 455 aaPredicted RBP10.31□□□□□ -0.76
CTNNA1-216ENST00000519489 NLRP2Q9NX02 1062 aa10.3□□□□□ -0.76
CTNNA1-216ENST00000519489 KIF13BQ9NQT8 1826 aa10.3□□□□□ -0.76
CTNNA1-216ENST00000519489 PCDHB8Q9UN66 801 aa10.29□□□□□ -0.76
CTNNA1-216ENST00000519489 RASSF10A6NK89 507 aa10.28□□□□□ -0.76
CTNNA1-216ENST00000519489 ITGBL1O95965 494 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-216ENST00000519489 WDR33Q9C0J8 1336 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-216ENST00000519489 ITSN1Q15811 1721 aa10.27□□□□□ -0.76
CTNNA1-216ENST00000519489 KAT6BQ8WYB5 2073 aa10.27□□□□□ -0.76
CTNNA1-216ENST00000519489 FXR1P51114 621 aaKnown RBP eCLIP10.27□□□□□ -0.77
CTNNA1-216ENST00000519489 MAP2K1Q02750 393 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-216ENST00000519489 C5P01031 1676 aa10.27□□□□□ -0.77
CTNNA1-216ENST00000519489 BRCA1P38398 1863 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-216ENST00000519489 NFAT5O94916 1531 aa10.27□□□□□ -0.77
CTNNA1-216ENST00000519489 USP47Q96K76 1375 aa10.26□□□□□ -0.77
CTNNA1-216ENST00000519489 NSD3Q9BZ95 1437 aa10.26□□□□□ -0.77
CTNNA1-216ENST00000519489 TMEM88BA6NKF7 163 aa10.26□□□□□ -0.77
CTNNA1-216ENST00000519489 SBF1O95248 1867 aa10.25□□□□□ -0.77
CTNNA1-216ENST00000519489 DOT1LQ8TEK3 1739 aa10.25□□□□□ -0.77
CTNNA1-216ENST00000519489 CHRNA5P30532 468 aa10.25□□□□□ -0.77
CTNNA1-216ENST00000519489 DGKZQ13574 1117 aa10.25□□□□□ -0.77
CTNNA1-216ENST00000519489 DALRD3Q5D0E6 543 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-216ENST00000519489 LINC00116Q8NCU8 138 aa10.25□□□□□ -0.77
CTNNA1-216ENST00000519489 AK7Q96M32 723 aa10.25□□□□□ -0.77
CTNNA1-216ENST00000519489 PIM2Q9P1W9 311 aa10.25□□□□□ -0.77
CTNNA1-216ENST00000519489 ZC3H4Q9UPT8 1303 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-216ENST00000519489 C4BP0C0L5 1744 aa10.24□□□□□ -0.77
CTNNA1-216ENST00000519489 IRX5P78411 483 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-216ENST00000519489 DEFB115Q30KQ5 88 aa10.24□□□□□ -0.77
CTNNA1-216ENST00000519489 PALLDQ8WX93 1383 aa10.24□□□□□ -0.77
CTNNA1-216ENST00000519489 LTBP1Q14766 1721 aa10.24□□□□□ -0.77
CTNNA1-216ENST00000519489 UBR3Q6ZT12 1888 aa10.23□□□□□ -0.77
CTNNA1-216ENST00000519489 LOC105371045A0A1W2PR82 267 aa10.23□□□□□ -0.77
CTNNA1-216ENST00000519489 PLCG2P16885 1265 aa10.23□□□□□ -0.77
CTNNA1-216ENST00000519489 SSFA2P28290 1259 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms