RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 C1orf141Q5JVX7 400 aa14.82□□□□□ -0.04
PVT1-208ENST00000519481 ZNF530Q6P9A1 599 aaPredicted RBP14.82□□□□□ -0.04
PVT1-208ENST00000519481 GNPATO15228 680 aa14.81□□□□□ -0.04
PVT1-208ENST00000519481 LINC00116Q8NCU8 138 aa14.81□□□□□ -0.04
PVT1-208ENST00000519481 ATG3Q9NT62 314 aa14.81□□□□□ -0.04
PVT1-208ENST00000519481 CABP4P57796 275 aa14.8□□□□□ -0.04
PVT1-208ENST00000519481 RBM42Q9BTD8 480 aaKnown RBP14.8□□□□□ -0.04
PVT1-208ENST00000519481 MTHFSP49914 203 aa14.79□□□□□ -0.04
PVT1-208ENST00000519481 ITPK1Q13572 414 aa14.79□□□□□ -0.04
PVT1-208ENST00000519481 SULT6B1Q6IMI4 303 aa14.78□□□□□ -0.04
PVT1-208ENST00000519481 RTCBQ9Y3I0 505 aaKnown RBP14.78□□□□□ -0.04
PVT1-208ENST00000519481 TRAPPC3LQ5T215 181 aa14.77□□□□□ -0.05
PVT1-208ENST00000519481 SMIM5Q71RC9 77 aa14.77□□□□□ -0.05
PVT1-208ENST00000519481 AMIGO3Q86WK7 504 aa14.77□□□□□ -0.05
PVT1-208ENST00000519481 UBR3Q6ZT12 1888 aa14.76□□□□□ -0.05
PVT1-208ENST00000519481 KIF7Q2M1P5 1343 aa14.76□□□□□ -0.05
PVT1-208ENST00000519481 YBX3P16989 372 aaKnown RBP eCLIP14.76□□□□□ -0.05
PVT1-208ENST00000519481 AEBP1Q8IUX7 1158 aa14.76□□□□□ -0.05
PVT1-208ENST00000519481 UTRNP46939 3433 aa14.76□□□□□ -0.05
PVT1-208ENST00000519481 IL13P35225 146 aa14.75□□□□□ -0.05
PVT1-208ENST00000519481 AMER1Q5JTC6 1135 aaPredicted RBP14.75□□□□□ -0.05
PVT1-208ENST00000519481 RC3H1Q5TC82 1133 aaKnown RBP14.75□□□□□ -0.05
PVT1-208ENST00000519481 KDRP35968 1356 aa14.74□□□□□ -0.05
PVT1-208ENST00000519481 NLGN1Q8N2Q7 840 aa14.74□□□□□ -0.05
PVT1-208ENST00000519481 KDM6AO15550 1401 aaPredicted RBP14.74□□□□□ -0.05
PVT1-208ENST00000519481 CNTNAP4Q9C0A0 1308 aa14.73□□□□□ -0.05
PVT1-208ENST00000519481 PTCD1O75127 700 aaKnown RBP14.73□□□□□ -0.05
PVT1-208ENST00000519481 GIGYF1O75420 1035 aaPredicted RBP14.73□□□□□ -0.05
PVT1-208ENST00000519481 MMP10P09238 476 aa14.73□□□□□ -0.05
PVT1-208ENST00000519481 RFC4P35249 363 aa14.73□□□□□ -0.05
PVT1-208ENST00000519481 NFATC2IPQ8NCF5 419 aa14.73□□□□□ -0.05
PVT1-208ENST00000519481 RPS6KA4O75676 772 aa14.72□□□□□ -0.05
PVT1-208ENST00000519481 C1QTNF8P60827 252 aa14.72□□□□□ -0.05
PVT1-208ENST00000519481 AKAP4Q5JQC9 854 aa14.72□□□□□ -0.05
PVT1-208ENST00000519481 SLC4A9Q96Q91 983 aa14.72□□□□□ -0.05
PVT1-208ENST00000519481 ARHGEF1Q92888 912 aaKnown RBP14.71□□□□□ -0.05
PVT1-208ENST00000519481 DIAPH1O60610 1272 aaKnown RBP14.7□□□□□ -0.06
PVT1-208ENST00000519481 CC2D1BQ5T0F9 858 aaKnown RBP14.7□□□□□ -0.06
PVT1-208ENST00000519481 CCDC87Q9NVE4 849 aa14.7□□□□□ -0.06
PVT1-208ENST00000519481 PARP3Q9Y6F1 533 aa14.7□□□□□ -0.06
PVT1-208ENST00000519481 ZNF831Q5JPB2 1677 aa14.7□□□□□ -0.06
PVT1-208ENST00000519481 SENP3-EIF4A1A0A087X0R7 540 aa14.69□□□□□ -0.06
PVT1-208ENST00000519481 HMOX1P09601 288 aa14.69□□□□□ -0.06
PVT1-208ENST00000519481 GOLGB1Q14789 3259 aaKnown RBP14.68□□□□□ -0.06
PVT1-208ENST00000519481 PER1O15534 1290 aaPredicted RBP14.68□□□□□ -0.06
PVT1-208ENST00000519481 CRKLP46109 303 aaKnown RBP14.68□□□□□ -0.06
PVT1-208ENST00000519481 TGFB2P61812 414 aa14.68□□□□□ -0.06
PVT1-208ENST00000519481 SLC52A2Q9HAB3 445 aa14.68□□□□□ -0.06
PVT1-208ENST00000519481 WWC3Q9ULE0 1092 aa14.68□□□□□ -0.06
PVT1-208ENST00000519481 GYS1P13807 737 aa14.67□□□□□ -0.06
PVT1-208ENST00000519481 RNMTO43148 476 aaKnown RBP14.66□□□□□ -0.06
PVT1-208ENST00000519481 CNGB1Q14028 1251 aaPredicted RBP14.66□□□□□ -0.06
PVT1-208ENST00000519481 GPBP1L1Q9HC44 474 aaPredicted RBP14.66□□□□□ -0.06
PVT1-208ENST00000519481 ATP10DQ9P241 1426 aa14.66□□□□□ -0.06
PVT1-208ENST00000519481 NPC1L1Q9UHC9 1359 aa14.65□□□□□ -0.06
PVT1-208ENST00000519481 LGR6Q9HBX8 967 aa14.65□□□□□ -0.06
PVT1-208ENST00000519481 COL5A3P25940 1745 aaPredicted RBP14.65□□□□□ -0.06
PVT1-208ENST00000519481 CICQ96RK0 1608 aaPredicted RBP14.64□□□□□ -0.07
PVT1-208ENST00000519481 U2SURPO15042 1029 aaKnown RBP14.64□□□□□ -0.07
PVT1-208ENST00000519481 ZPR1O75312 459 aa14.64□□□□□ -0.07
PVT1-208ENST00000519481 MTHFSDQ2M296 383 aaKnown RBP14.64□□□□□ -0.07
PVT1-208ENST00000519481 BCS1LQ9Y276 419 aa14.64□□□□□ -0.07
PVT1-208ENST00000519481 SCN11AQ9UI33 1791 aa14.64□□□□□ -0.07
PVT1-208ENST00000519481 A0A0G2JLW4 131 aa14.63□□□□□ -0.07
PVT1-208ENST00000519481 PPP4R3CPQ6ZMV5 832 aa14.63□□□□□ -0.07
PVT1-208ENST00000519481 DNAJC10Q8IXB1 793 aa14.63□□□□□ -0.07
PVT1-208ENST00000519481 C10orf71Q711Q0 1435 aa14.63□□□□□ -0.07
PVT1-208ENST00000519481 USP42Q9H9J4 1324 aaKnown RBP14.63□□□□□ -0.07
PVT1-208ENST00000519481 PXDNLA1KZ92 1463 aa14.63□□□□□ -0.07
PVT1-208ENST00000519481 MYH14Q7Z406 1995 aaKnown RBP14.62□□□□□ -0.07
PVT1-208ENST00000519481 SLC39A6Q13433 755 aa14.62□□□□□ -0.07
PVT1-208ENST00000519481 TTC5Q8N0Z6 440 aa14.62□□□□□ -0.07
PVT1-208ENST00000519481 GAS2L2Q8NHY3 880 aa14.62□□□□□ -0.07
PVT1-208ENST00000519481 ZNF526Q8TF50 670 aaPredicted RBP14.62□□□□□ -0.07
PVT1-208ENST00000519481 CFAP53Q96M91 514 aa14.62□□□□□ -0.07
PVT1-208ENST00000519481 SRP68Q9UHB9 627 aaKnown RBP14.62□□□□□ -0.07
PVT1-208ENST00000519481 FCHSD2O94868 740 aa14.61□□□□□ -0.07
PVT1-208ENST00000519481 DPEP1P16444 411 aa14.61□□□□□ -0.07
PVT1-208ENST00000519481 FKBP8Q14318 412 aa14.61□□□□□ -0.07
PVT1-208ENST00000519481 INTS5Q6P9B9 1019 aaKnown RBP14.61□□□□□ -0.07
PVT1-208ENST00000519481 C4AP0C0L4 1744 aa14.61□□□□□ -0.07
PVT1-208ENST00000519481 ADCY9O60503 1353 aa14.6□□□□□ -0.07
PVT1-208ENST00000519481 CYP19A1P11511 503 aaPredicted RBP14.6□□□□□ -0.07
PVT1-208ENST00000519481 TEFQ10587 303 aa14.6□□□□□ -0.07
PVT1-208ENST00000519481 ARHGAP27Q6ZUM4 889 aa14.6□□□□□ -0.07
PVT1-208ENST00000519481 VSIG10Q8N0Z9 540 aa14.6□□□□□ -0.07
PVT1-208ENST00000519481 MRC1P22897 1456 aa14.6□□□□□ -0.07
PVT1-208ENST00000519481 TJP1Q07157 1748 aa14.59□□□□□ -0.07
PVT1-208ENST00000519481 GNAT3A8MTJ3 354 aa14.59□□□□□ -0.07
PVT1-208ENST00000519481 STARD3NLO95772 234 aa14.59□□□□□ -0.07
PVT1-208ENST00000519481 PIM2Q9P1W9 311 aa14.59□□□□□ -0.07
PVT1-208ENST00000519481 NUDCQ9Y266 331 aa14.59□□□□□ -0.07
PVT1-208ENST00000519481 SOS1Q07889 1333 aaPredicted RBP14.59□□□□□ -0.07
PVT1-208ENST00000519481 KIF13BQ9NQT8 1826 aa14.59□□□□□ -0.07
PVT1-208ENST00000519481 USPL1Q5W0Q7 1092 aa14.58□□□□□ -0.08
PVT1-208ENST00000519481 DDR1Q08345 913 aa14.57□□□□□ -0.08
PVT1-208ENST00000519481 DALRD3Q5D0E6 543 aaKnown RBP14.57□□□□□ -0.08
PVT1-208ENST00000519481 TEX13AQ9BXU3 409 aaPredicted RBP14.57□□□□□ -0.08
PVT1-208ENST00000519481 NARFQ9UHQ1 456 aa14.57□□□□□ -0.08
PVT1-208ENST00000519481 ZBTB1Q9Y2K1 713 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms