RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 FAM208AQ9UK61 1670 aaKnown RBP9.5□□□□□ -0.89
MRPS28-205ENST00000519386 BRWD3Q6RI45 1802 aa9.49□□□□□ -0.89
MRPS28-205ENST00000519386 WNK3Q9BYP7 1800 aa9.49□□□□□ -0.89
MRPS28-205ENST00000519386 THSD7AQ9UPZ6 1657 aa9.49□□□□□ -0.89
MRPS28-205ENST00000519386 A0A0G2JS52 829 aa9.49□□□□□ -0.89
MRPS28-205ENST00000519386 MYT1Q01538 1121 aa9.49□□□□□ -0.89
MRPS28-205ENST00000519386 RUNDC1Q96C34 613 aa9.49□□□□□ -0.89
MRPS28-205ENST00000519386 CARD10Q9BWT7 1032 aa9.49□□□□□ -0.89
MRPS28-205ENST00000519386 ONECUT3O60422 494 aaPredicted RBP9.48□□□□□ -0.89
MRPS28-205ENST00000519386 POTEJP0CG39 1038 aa9.48□□□□□ -0.89
MRPS28-205ENST00000519386 IRX5P78411 483 aaPredicted RBP9.48□□□□□ -0.89
MRPS28-205ENST00000519386 BARGINQ6ZT62 677 aa9.48□□□□□ -0.89
MRPS28-205ENST00000519386 SEPT12Q8IYM1 358 aa9.48□□□□□ -0.89
MRPS28-205ENST00000519386 SEC24BO95487 1268 aa9.47□□□□□ -0.89
MRPS28-205ENST00000519386 GOLGA2Q08379 1002 aa9.47□□□□□ -0.89
MRPS28-205ENST00000519386 EIF4A2Q14240 407 aaKnown RBP9.47□□□□□ -0.89
MRPS28-205ENST00000519386 NBPF6Q5VWK0 638 aa9.47□□□□□ -0.89
MRPS28-205ENST00000519386 USHBP1Q8N6Y0 703 aa9.47□□□□□ -0.89
MRPS28-205ENST00000519386 NBPF4Q96M43 638 aa9.47□□□□□ -0.89
MRPS28-205ENST00000519386 THRAP3Q9Y2W1 955 aaKnown RBP9.47□□□□□ -0.89
MRPS28-205ENST00000519386 DISP2A7MBM2 1401 aa9.47□□□□□ -0.89
MRPS28-205ENST00000519386 PARP4Q9UKK3 1724 aaKnown RBP9.46□□□□□ -0.89
MRPS28-205ENST00000519386 DIAPH1O60610 1272 aaKnown RBP9.46□□□□□ -0.9
MRPS28-205ENST00000519386 TRMT2AQ8IZ69 625 aaKnown RBP9.46□□□□□ -0.9
MRPS28-205ENST00000519386 LRRC37A3O60309 1634 aa9.45□□□□□ -0.9
MRPS28-205ENST00000519386 E9PSI1 815 aa9.45□□□□□ -0.9
MRPS28-205ENST00000519386 RGL2O15211 777 aa9.45□□□□□ -0.9
MRPS28-205ENST00000519386 EYA1Q99502 592 aa9.45□□□□□ -0.9
MRPS28-205ENST00000519386 EP400Q96L91 3159 aa9.44□□□□□ -0.9
MRPS28-205ENST00000519386 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.44□□□□□ -0.9
MRPS28-205ENST00000519386 APAF1O14727 1248 aa9.44□□□□□ -0.9
MRPS28-205ENST00000519386 FCHSD2O94868 740 aa9.44□□□□□ -0.9
MRPS28-205ENST00000519386 IL2RBP14784 551 aa9.44□□□□□ -0.9
MRPS28-205ENST00000519386 IL13P35225 146 aa9.44□□□□□ -0.9
MRPS28-205ENST00000519386 KRT27Q7Z3Y8 459 aa9.44□□□□□ -0.9
MRPS28-205ENST00000519386 WDR63Q8IWG1 891 aa9.44□□□□□ -0.9
MRPS28-205ENST00000519386 OTUD5Q96G74 571 aa9.44□□□□□ -0.9
MRPS28-205ENST00000519386 ZFP91Q96JP5 570 aaPredicted RBP9.44□□□□□ -0.9
MRPS28-205ENST00000519386 RCAN3Q9UKA8 241 aa9.44□□□□□ -0.9
MRPS28-205ENST00000519386 NCAPD2Q15021 1401 aa9.44□□□□□ -0.9
MRPS28-205ENST00000519386 MEGF6O75095 1541 aa9.44□□□□□ -0.9
MRPS28-205ENST00000519386 IL16Q14005 1332 aa9.43□□□□□ -0.9
MRPS28-205ENST00000519386 IGSF1Q8N6C5 1336 aa9.43□□□□□ -0.9
MRPS28-205ENST00000519386 MAPK8IP3Q9UPT6 1336 aa9.43□□□□□ -0.9
MRPS28-205ENST00000519386 U2AF1L5P0DN76 240 aaPredicted RBP9.43□□□□□ -0.9
MRPS28-205ENST00000519386 PLCG2P16885 1265 aa9.43□□□□□ -0.9
MRPS28-205ENST00000519386 U2AF1Q01081 240 aaKnown RBP eCLIP9.43□□□□□ -0.9
MRPS28-205ENST00000519386 SLFN5Q08AF3 891 aa9.43□□□□□ -0.9
MRPS28-205ENST00000519386 MKRN3Q13064 507 aaKnown RBP9.43□□□□□ -0.9
MRPS28-205ENST00000519386 FAM182BQ5T319 152 aa9.43□□□□□ -0.9
MRPS28-205ENST00000519386 DUSP27Q5VZP5 1158 aa9.43□□□□□ -0.9
MRPS28-205ENST00000519386 PLEKHF1Q96S99 279 aa9.43□□□□□ -0.9
MRPS28-205ENST00000519386 CDCA7Q9BWT1 371 aaPredicted RBP9.43□□□□□ -0.9
MRPS28-205ENST00000519386 OCEL1Q9H607 264 aa9.43□□□□□ -0.9
MRPS28-205ENST00000519386 TNS2Q63HR2 1409 aa9.42□□□□□ -0.9
MRPS28-205ENST00000519386 DDB1Q16531 1140 aa9.42□□□□□ -0.9
MRPS28-205ENST00000519386 WWC1Q8IX03 1113 aa9.42□□□□□ -0.9
MRPS28-205ENST00000519386 CCDC146Q8IYE0 955 aa9.42□□□□□ -0.9
MRPS28-205ENST00000519386 RAPGEF4Q8WZA2 1011 aa9.42□□□□□ -0.9
MRPS28-205ENST00000519386 KAT6BQ8WYB5 2073 aa9.42□□□□□ -0.9
MRPS28-205ENST00000519386 OVOS2A0A0G2JMS6 1433 aa9.41□□□□□ -0.9
MRPS28-205ENST00000519386 KDRP35968 1356 aa9.41□□□□□ -0.9
MRPS28-205ENST00000519386 NEFMP07197 916 aa9.41□□□□□ -0.9
MRPS28-205ENST00000519386 CT47B1P0C2W7 299 aaPredicted RBP9.41□□□□□ -0.9
MRPS28-205ENST00000519386 TATP17735 454 aaPredicted RBP9.41□□□□□ -0.9
MRPS28-205ENST00000519386 RRP1P56182 461 aaKnown RBP9.41□□□□□ -0.9
MRPS28-205ENST00000519386 AEBP1Q8IUX7 1158 aa9.41□□□□□ -0.9
MRPS28-205ENST00000519386 PDCD7Q8N8D1 485 aaKnown RBP9.41□□□□□ -0.9
MRPS28-205ENST00000519386 SHANK3Q9BYB0 1731 aa9.41□□□□□ -0.9
MRPS28-205ENST00000519386 VIRMAQ69YN4 1812 aaKnown RBP9.4□□□□□ -0.9
MRPS28-205ENST00000519386 EXOC5O00471 708 aa9.4□□□□□ -0.9
MRPS28-205ENST00000519386 SULT6B1Q6IMI4 303 aa9.4□□□□□ -0.9
MRPS28-205ENST00000519386 MARCH10Q8NA82 808 aaPredicted RBP9.4□□□□□ -0.9
MRPS28-205ENST00000519386 CDCA7LQ96GN5 454 aa9.4□□□□□ -0.9
MRPS28-205ENST00000519386 RSPH6AQ9H0K4 717 aa9.4□□□□□ -0.9
MRPS28-205ENST00000519386 PPP4R2Q9NY27 417 aa9.4□□□□□ -0.9
MRPS28-205ENST00000519386 PKD1L3Q7Z443 1732 aa9.39□□□□□ -0.91
MRPS28-205ENST00000519386 PLEKHG2Q9H7P9 1386 aa9.39□□□□□ -0.91
MRPS28-205ENST00000519386 CACNA1FO60840 1977 aa9.39□□□□□ -0.91
MRPS28-205ENST00000519386 U2SURPO15042 1029 aaKnown RBP9.39□□□□□ -0.91
MRPS28-205ENST00000519386 HMOX1P09601 288 aa9.39□□□□□ -0.91
MRPS28-205ENST00000519386 ZCRB1Q8TBF4 217 aaKnown RBP9.39□□□□□ -0.91
MRPS28-205ENST00000519386 MYH16Q9H6N6 1097 aa9.39□□□□□ -0.91
MRPS28-205ENST00000519386 TAOK2Q9UL54 1235 aa9.39□□□□□ -0.91
MRPS28-205ENST00000519386 SOCS7O14512 581 aa9.38□□□□□ -0.91
MRPS28-205ENST00000519386 TMPOP42166 694 aaKnown RBP9.38□□□□□ -0.91
MRPS28-205ENST00000519386 CALD1Q05682 793 aaKnown RBP9.38□□□□□ -0.91
MRPS28-205ENST00000519386 LMOD3Q0VAK6 560 aa9.38□□□□□ -0.91
MRPS28-205ENST00000519386 MAMSTRQ6ZN01 415 aa9.38□□□□□ -0.91
MRPS28-205ENST00000519386 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.38□□□□□ -0.91
MRPS28-205ENST00000519386 DDX54Q8TDD1 881 aaKnown RBP9.38□□□□□ -0.91
MRPS28-205ENST00000519386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.38□□□□□ -0.91
MRPS28-205ENST00000519386 SBF2Q86WG5 1849 aa9.38□□□□□ -0.91
MRPS28-205ENST00000519386 FAM196AQ6ZSG2 479 aa9.37□□□□□ -0.91
MRPS28-205ENST00000519386 EFCAB3Q8N7B9 438 aa9.37□□□□□ -0.91
MRPS28-205ENST00000519386 UPF1Q92900 1129 aaKnown RBP eCLIP9.37□□□□□ -0.91
MRPS28-205ENST00000519386 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
MRPS28-205ENST00000519386 PCDH11XQ9BZA7 1347 aa9.36□□□□□ -0.91
MRPS28-205ENST00000519386 PCDH11YQ9BZA8 1340 aa9.36□□□□□ -0.91
MRPS28-205ENST00000519386 CYP27B1O15528 508 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms