RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 LMOD2Q6P5Q4 547 aa11.32□□□□□ -0.6
CDKL3-203ENST00000519312 CDCA7LQ96GN5 454 aa11.32□□□□□ -0.6
CDKL3-203ENST00000519312 ZFRQ96KR1 1074 aaKnown RBP11.32□□□□□ -0.6
CDKL3-203ENST00000519312 RREB1Q92766 1687 aa11.32□□□□□ -0.6
CDKL3-203ENST00000519312 SPATA31A1Q5TZJ5 1347 aa11.32□□□□□ -0.6
CDKL3-203ENST00000519312 WASLO00401 505 aaPredicted RBP11.31□□□□□ -0.6
CDKL3-203ENST00000519312 BCAMP50895 628 aa11.31□□□□□ -0.6
CDKL3-203ENST00000519312 PRSS12P56730 875 aa11.31□□□□□ -0.6
CDKL3-203ENST00000519312 SAFB2Q14151 953 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDKL3-203ENST00000519312 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
CDKL3-203ENST00000519312 TOPAZ1Q8N9V7 1692 aa11.3□□□□□ -0.6
CDKL3-203ENST00000519312 ARHGEF28Q8N1W1 1705 aaKnown RBP11.3□□□□□ -0.6
CDKL3-203ENST00000519312 A0A0G2JS52 829 aa11.3□□□□□ -0.6
CDKL3-203ENST00000519312 MYT1Q01538 1121 aa11.3□□□□□ -0.6
CDKL3-203ENST00000519312 PACS2Q86VP3 889 aa11.3□□□□□ -0.6
CDKL3-203ENST00000519312 POLR3AO14802 1390 aaPredicted RBP11.29□□□□□ -0.6
CDKL3-203ENST00000519312 FAM196AQ6ZSG2 479 aa11.29□□□□□ -0.6
CDKL3-203ENST00000519312 CAMKK2Q96RR4 588 aa11.29□□□□□ -0.6
CDKL3-203ENST00000519312 PRDM11Q9NQV5 511 aa11.29□□□□□ -0.6
CDKL3-203ENST00000519312 LMO7Q8WWI1 1683 aa11.29□□□□□ -0.6
CDKL3-203ENST00000519312 KIAA0232Q92628 1395 aa11.28□□□□□ -0.6
CDKL3-203ENST00000519312 NRKQ7Z2Y5 1582 aa11.28□□□□□ -0.6
CDKL3-203ENST00000519312 R3HDM1Q15032 1099 aaKnown RBP11.28□□□□□ -0.6
CDKL3-203ENST00000519312 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
CDKL3-203ENST00000519312 TRAK1Q9UPV9 953 aa11.28□□□□□ -0.6
CDKL3-203ENST00000519312 CPDO75976 1380 aa11.28□□□□□ -0.6
CDKL3-203ENST00000519312 SSH2Q76I76 1423 aa11.27□□□□□ -0.6
CDKL3-203ENST00000519312 NUP188Q5SRE5 1749 aa11.27□□□□□ -0.61
CDKL3-203ENST00000519312 SOWAHBA6NEL2 793 aa11.27□□□□□ -0.61
CDKL3-203ENST00000519312 C3orf80F5H4A9 247 aa11.27□□□□□ -0.61
CDKL3-203ENST00000519312 SMAPO00193 183 aa11.27□□□□□ -0.61
CDKL3-203ENST00000519312 NGDNQ8NEJ9 315 aaKnown RBP11.27□□□□□ -0.61
CDKL3-203ENST00000519312 HIRIP3Q9BW71 556 aaPredicted RBP11.27□□□□□ -0.61
CDKL3-203ENST00000519312 MINK1Q8N4C8 1332 aaPredicted RBP11.27□□□□□ -0.61
CDKL3-203ENST00000519312 RGPD3A6NKT7 1758 aaPredicted RBP11.26□□□□□ -0.61
CDKL3-203ENST00000519312 RGPD4Q7Z3J3 1758 aa11.26□□□□□ -0.61
CDKL3-203ENST00000519312 EZH2Q15910 746 aaKnown RBP11.26□□□□□ -0.61
CDKL3-203ENST00000519312 FAM182BQ5T319 152 aa11.25□□□□□ -0.61
CDKL3-203ENST00000519312 NPDC1Q9NQX5 325 aaPredicted RBP11.25□□□□□ -0.61
CDKL3-203ENST00000519312 PARP4Q9UKK3 1724 aaKnown RBP11.25□□□□□ -0.61
CDKL3-203ENST00000519312 USP19O94966 1318 aa11.25□□□□□ -0.61
CDKL3-203ENST00000519312 RAB3GAP2Q9H2M9 1393 aa11.25□□□□□ -0.61
CDKL3-203ENST00000519312 CAMTA1Q9Y6Y1 1673 aa11.24□□□□□ -0.61
CDKL3-203ENST00000519312 KIAA1210Q9ULL0 1709 aa11.24□□□□□ -0.61
CDKL3-203ENST00000519312 C11orf95C9JLR9 678 aaPredicted RBP11.24□□□□□ -0.61
CDKL3-203ENST00000519312 NUDT16Q96DE0 195 aaKnown RBP11.24□□□□□ -0.61
CDKL3-203ENST00000519312 THRAP3Q9Y2W1 955 aaKnown RBP11.24□□□□□ -0.61
CDKL3-203ENST00000519312 BRD4O60885 1362 aaPredicted RBP11.24□□□□□ -0.61
CDKL3-203ENST00000519312 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
CDKL3-203ENST00000519312 SEMA3EO15041 775 aa11.23□□□□□ -0.61
CDKL3-203ENST00000519312 TRIM37O94972 964 aa11.23□□□□□ -0.61
CDKL3-203ENST00000519312 PEAK1Q9H792 1746 aa11.23□□□□□ -0.61
CDKL3-203ENST00000519312 APBA3O96018 575 aa11.22□□□□□ -0.61
CDKL3-203ENST00000519312 CHRNA2Q15822 529 aa11.22□□□□□ -0.61
CDKL3-203ENST00000519312 TATDN2Q93075 761 aa11.22□□□□□ -0.61
CDKL3-203ENST00000519312 LRCH3Q96II8 777 aa11.22□□□□□ -0.61
CDKL3-203ENST00000519312 WBP1LQ9NX94 342 aa11.22□□□□□ -0.61
CDKL3-203ENST00000519312 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.22□□□□□ -0.61
CDKL3-203ENST00000519312 PNMA3Q9UL41 463 aa11.22□□□□□ -0.61
CDKL3-203ENST00000519312 NINLQ9Y2I6 1382 aa11.22□□□□□ -0.61
CDKL3-203ENST00000519312 COL5A2P05997 1499 aaPredicted RBP11.21□□□□□ -0.61
CDKL3-203ENST00000519312 ACEP12821 1306 aa11.21□□□□□ -0.61
CDKL3-203ENST00000519312 NBPF26B4DH59 902 aa11.21□□□□□ -0.61
CDKL3-203ENST00000519312 PADI6Q6TGC4 694 aa11.21□□□□□ -0.61
CDKL3-203ENST00000519312 TCP11L2Q8N4U5 519 aa11.21□□□□□ -0.61
CDKL3-203ENST00000519312 DCAF11Q8TEB1 546 aa11.21□□□□□ -0.61
CDKL3-203ENST00000519312 BCL9O00512 1426 aa11.2□□□□□ -0.62
CDKL3-203ENST00000519312 PDE3BQ13370 1112 aa11.2□□□□□ -0.62
CDKL3-203ENST00000519312 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
CDKL3-203ENST00000519312 NUDT18Q6ZVK8 323 aa11.2□□□□□ -0.62
CDKL3-203ENST00000519312 STRN4Q9NRL3 753 aa11.2□□□□□ -0.62
CDKL3-203ENST00000519312 RBM27Q9P2N5 1060 aaKnown RBP11.2□□□□□ -0.62
CDKL3-203ENST00000519312 SLIT3O75094 1523 aa11.19□□□□□ -0.62
CDKL3-203ENST00000519312 OVOS2A0A0G2JMS6 1433 aa11.19□□□□□ -0.62
CDKL3-203ENST00000519312 OVOS2A0A0J9YW53 1432 aa11.19□□□□□ -0.62
CDKL3-203ENST00000519312 CRB1P82279 1406 aa11.19□□□□□ -0.62
CDKL3-203ENST00000519312 OVOS2Q6IE36 1432 aa11.19□□□□□ -0.62
CDKL3-203ENST00000519312 ZC3H6P61129 1189 aaKnown RBP11.19□□□□□ -0.62
CDKL3-203ENST00000519312 NBPF14Q5TI25 921 aa11.19□□□□□ -0.62
CDKL3-203ENST00000519312 TTC13Q8NBP0 860 aa11.19□□□□□ -0.62
CDKL3-203ENST00000519312 CDK19Q9BWU1 502 aa11.19□□□□□ -0.62
CDKL3-203ENST00000519312 HPS5Q9UPZ3 1129 aa11.19□□□□□ -0.62
CDKL3-203ENST00000519312 LRRC37A3O60309 1634 aa11.19□□□□□ -0.62
CDKL3-203ENST00000519312 LARP1Q6PKG0 1096 aaKnown RBP11.18□□□□□ -0.62
CDKL3-203ENST00000519312 SAMD7Q7Z3H4 446 aa11.18□□□□□ -0.62
CDKL3-203ENST00000519312 KDM2AQ9Y2K7 1162 aa11.18□□□□□ -0.62
CDKL3-203ENST00000519312 CASZ1Q86V15 1759 aa11.18□□□□□ -0.62
CDKL3-203ENST00000519312 AATKQ6ZMQ8 1374 aa11.17□□□□□ -0.62
CDKL3-203ENST00000519312 PLSCR1O15162 318 aa11.17□□□□□ -0.62
CDKL3-203ENST00000519312 EVA1CP58658 441 aa11.17□□□□□ -0.62
CDKL3-203ENST00000519312 NLRP13Q86W25 1043 aa11.17□□□□□ -0.62
CDKL3-203ENST00000519312 SPON1Q9HCB6 807 aa11.17□□□□□ -0.62
CDKL3-203ENST00000519312 TSR3Q9UJK0 312 aaKnown RBP11.17□□□□□ -0.62
CDKL3-203ENST00000519312 WNK3Q9BYP7 1800 aa11.16□□□□□ -0.62
CDKL3-203ENST00000519312 KCNQ2O43526 872 aa11.16□□□□□ -0.62
CDKL3-203ENST00000519312 GCP02774 474 aa11.16□□□□□ -0.62
CDKL3-203ENST00000519312 ABTB2Q8N961 1025 aa11.16□□□□□ -0.62
CDKL3-203ENST00000519312 USP35Q9P2H5 1018 aa11.16□□□□□ -0.62
CDKL3-203ENST00000519312 USP6P35125 1406 aa11.16□□□□□ -0.62
CDKL3-203ENST00000519312 PPIP5K1Q6PFW1 1433 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms