RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 ARXQ96QS3 562 aa17.14■□□□□ 0.33
MCPH1-202ENST00000519221 MAP3K5Q99683 1374 aa17.14■□□□□ 0.33
MCPH1-202ENST00000519221 CNGB1Q14028 1251 aaPredicted RBP17.13■□□□□ 0.33
MCPH1-202ENST00000519221 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
MCPH1-202ENST00000519221 AK7Q96M32 723 aa17.13■□□□□ 0.33
MCPH1-202ENST00000519221 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
MCPH1-202ENST00000519221 ATP6V1AP38606 617 aa17.12■□□□□ 0.33
MCPH1-202ENST00000519221 ADAMTS7Q9UKP4 1686 aa17.12■□□□□ 0.33
MCPH1-202ENST00000519221 COL5A3P25940 1745 aaPredicted RBP17.11■□□□□ 0.33
MCPH1-202ENST00000519221 U2SURPO15042 1029 aaKnown RBP17.1■□□□□ 0.33
MCPH1-202ENST00000519221 MSH5O43196 834 aa17.1■□□□□ 0.33
MCPH1-202ENST00000519221 SSFA2P28290 1259 aa17.1■□□□□ 0.33
MCPH1-202ENST00000519221 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
MCPH1-202ENST00000519221 LINC00116Q8NCU8 138 aa17.1■□□□□ 0.33
MCPH1-202ENST00000519221 SYT17Q9BSW7 474 aa17.1■□□□□ 0.33
MCPH1-202ENST00000519221 FHDC1Q9C0D6 1143 aaPredicted RBP17.1■□□□□ 0.33
MCPH1-202ENST00000519221 NUDCQ9Y266 331 aa17.1■□□□□ 0.33
MCPH1-202ENST00000519221 MRC1P22897 1456 aa17.1■□□□□ 0.33
MCPH1-202ENST00000519221 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
MCPH1-202ENST00000519221 ITPK1Q13572 414 aa17.09■□□□□ 0.33
MCPH1-202ENST00000519221 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
MCPH1-202ENST00000519221 NFATC2IPQ8NCF5 419 aa17.09■□□□□ 0.33
MCPH1-202ENST00000519221 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.33
MCPH1-202ENST00000519221 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
MCPH1-202ENST00000519221 SLC52A2Q9HAB3 445 aa17.08■□□□□ 0.32
MCPH1-202ENST00000519221 RNMTO43148 476 aaKnown RBP17.07■□□□□ 0.32
MCPH1-202ENST00000519221 RC3H1Q5TC82 1133 aaKnown RBP17.07■□□□□ 0.32
MCPH1-202ENST00000519221 GAS2L2Q8NHY3 880 aa17.07■□□□□ 0.32
MCPH1-202ENST00000519221 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.06■□□□□ 0.32
MCPH1-202ENST00000519221 SLC4A9Q96Q91 983 aa17.06■□□□□ 0.32
MCPH1-202ENST00000519221 CNTNAP4Q9C0A0 1308 aa17.05■□□□□ 0.32
MCPH1-202ENST00000519221 GNPATO15228 680 aa17.05■□□□□ 0.32
MCPH1-202ENST00000519221 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
MCPH1-202ENST00000519221 CHD4Q14839 1912 aa17.04■□□□□ 0.32
MCPH1-202ENST00000519221 AMIGO3Q86WK7 504 aa17.04■□□□□ 0.32
MCPH1-202ENST00000519221 TJP1Q07157 1748 aa17.04■□□□□ 0.32
MCPH1-202ENST00000519221 SIPA1L3O60292 1781 aaPredicted RBP17.03■□□□□ 0.32
MCPH1-202ENST00000519221 GNAT3A8MTJ3 354 aa17.03■□□□□ 0.32
MCPH1-202ENST00000519221 PTCD1O75127 700 aaKnown RBP17.03■□□□□ 0.32
MCPH1-202ENST00000519221 PHF14O94880 888 aa17.03■□□□□ 0.32
MCPH1-202ENST00000519221 ADRA2BP18089 450 aa17.03■□□□□ 0.32
MCPH1-202ENST00000519221 RSPH6AQ9H0K4 717 aa17.03■□□□□ 0.32
MCPH1-202ENST00000519221 RTCBQ9Y3I0 505 aaKnown RBP17.03■□□□□ 0.32
MCPH1-202ENST00000519221 UBR2Q8IWV8 1755 aa17.02■□□□□ 0.32
MCPH1-202ENST00000519221 FCHSD2O94868 740 aa17.02■□□□□ 0.32
MCPH1-202ENST00000519221 PRKAR2BP31323 418 aa17.02■□□□□ 0.32
MCPH1-202ENST00000519221 MSL1Q68DK7 614 aa17.02■□□□□ 0.32
MCPH1-202ENST00000519221 RPS6KA4O75676 772 aa17.01■□□□□ 0.31
MCPH1-202ENST00000519221 U2AF1L5P0DN76 240 aaPredicted RBP17.01■□□□□ 0.31
MCPH1-202ENST00000519221 U2AF1Q01081 240 aaKnown RBP eCLIP17.01■□□□□ 0.31
MCPH1-202ENST00000519221 TRAPPC3LQ5T215 181 aa17■□□□□ 0.31
MCPH1-202ENST00000519221 C4AP0C0L4 1744 aa16.99■□□□□ 0.31
MCPH1-202ENST00000519221 TEFQ10587 303 aa16.99■□□□□ 0.31
MCPH1-202ENST00000519221 RALBP1Q15311 655 aa16.99■□□□□ 0.31
MCPH1-202ENST00000519221 KLHL34Q8N239 644 aa16.99■□□□□ 0.31
MCPH1-202ENST00000519221 PHACTR3Q96KR7 559 aa16.99■□□□□ 0.31
MCPH1-202ENST00000519221 KCPQ6ZWJ8 1503 aa16.99■□□□□ 0.31
MCPH1-202ENST00000519221 CRKLP46109 303 aaKnown RBP16.98■□□□□ 0.31
MCPH1-202ENST00000519221 SMIM5Q71RC9 77 aa16.98■□□□□ 0.31
MCPH1-202ENST00000519221 VSIG10Q8N0Z9 540 aa16.98■□□□□ 0.31
MCPH1-202ENST00000519221 IL17REQ8NFR9 667 aa16.98■□□□□ 0.31
MCPH1-202ENST00000519221 CD2APQ9Y5K6 639 aa16.98■□□□□ 0.31
MCPH1-202ENST00000519221 CEMIPQ8WUJ3 1361 aa16.98■□□□□ 0.31
MCPH1-202ENST00000519221 NLGN1Q8N2Q7 840 aa16.97■□□□□ 0.31
MCPH1-202ENST00000519221 ARHGEF1Q92888 912 aaKnown RBP16.97■□□□□ 0.31
MCPH1-202ENST00000519221 RFC4P35249 363 aa16.96■□□□□ 0.31
MCPH1-202ENST00000519221 SLC39A6Q13433 755 aa16.96■□□□□ 0.31
MCPH1-202ENST00000519221 TTC5Q8N0Z6 440 aa16.96■□□□□ 0.31
MCPH1-202ENST00000519221 DLG5Q8TDM6 1919 aa16.96■□□□□ 0.3
MCPH1-202ENST00000519221 HTATSF1O43719 755 aaKnown RBP16.95■□□□□ 0.3
MCPH1-202ENST00000519221 NEFMP07197 916 aa16.95■□□□□ 0.3
MCPH1-202ENST00000519221 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
MCPH1-202ENST00000519221 DNAJC10Q8IXB1 793 aa16.95■□□□□ 0.3
MCPH1-202ENST00000519221 KIF13BQ9NQT8 1826 aa16.94■□□□□ 0.3
MCPH1-202ENST00000519221 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
MCPH1-202ENST00000519221 YY1P25490 414 aa16.94■□□□□ 0.3
MCPH1-202ENST00000519221 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
MCPH1-202ENST00000519221 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
MCPH1-202ENST00000519221 NLGN2Q8NFZ4 835 aa16.94■□□□□ 0.3
MCPH1-202ENST00000519221 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
MCPH1-202ENST00000519221 CCDC87Q9NVE4 849 aa16.94■□□□□ 0.3
MCPH1-202ENST00000519221 GPR162Q16538 588 aa16.93■□□□□ 0.3
MCPH1-202ENST00000519221 ZNF790Q6PG37 636 aa16.93■□□□□ 0.3
MCPH1-202ENST00000519221 PNNQ9H307 717 aaKnown RBP16.93■□□□□ 0.3
MCPH1-202ENST00000519221 MMP10P09238 476 aa16.92■□□□□ 0.3
MCPH1-202ENST00000519221 GYS1P13807 737 aa16.92■□□□□ 0.3
MCPH1-202ENST00000519221 TEX13AQ9BXU3 409 aaPredicted RBP16.92■□□□□ 0.3
MCPH1-202ENST00000519221 STARD3NLO95772 234 aa16.91■□□□□ 0.3
MCPH1-202ENST00000519221 SOS1Q07889 1333 aaPredicted RBP16.91■□□□□ 0.3
MCPH1-202ENST00000519221 USP42Q9H9J4 1324 aaKnown RBP16.91■□□□□ 0.3
MCPH1-202ENST00000519221 HEG1Q9ULI3 1381 aa16.9■□□□□ 0.3
MCPH1-202ENST00000519221 ZNF496Q96IT1 587 aaPredicted RBP16.9■□□□□ 0.3
MCPH1-202ENST00000519221 FMNL2Q96PY5 1086 aa16.9■□□□□ 0.3
MCPH1-202ENST00000519221 MYBBP1AQ9BQG0 1328 aaKnown RBP16.9■□□□□ 0.3
MCPH1-202ENST00000519221 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
MCPH1-202ENST00000519221 GRIN3BO60391 1043 aa16.89■□□□□ 0.29
MCPH1-202ENST00000519221 PLEKHF1Q96S99 279 aa16.89■□□□□ 0.29
MCPH1-202ENST00000519221 ZBTB1Q9Y2K1 713 aa16.88■□□□□ 0.29
MCPH1-202ENST00000519221 UTRNP46939 3433 aa16.88■□□□□ 0.29
MCPH1-202ENST00000519221 ZPR1O75312 459 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 212.3 ms