RNA–Protein interactions for RNA: ENST00000519126.1

TMPRSS4-206, Transcript of transmembrane serine protease 4, humanhuman

TSL 1 (best)

Gene TMPRSS4, Length 847 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-206ENST00000519126 USHBP1Q8N6Y0 703 aa16.2■□□□□ 0.18
TMPRSS4-206ENST00000519126 NBPF4Q96M43 638 aa16.2■□□□□ 0.18
TMPRSS4-206ENST00000519126 TERF2IPQ9NYB0 399 aa16.2■□□□□ 0.18
TMPRSS4-206ENST00000519126 FCHSD2O94868 740 aa16.19■□□□□ 0.18
TMPRSS4-206ENST00000519126 TATP17735 454 aaPredicted RBP16.19■□□□□ 0.18
TMPRSS4-206ENST00000519126 SP7Q8TDD2 431 aaPredicted RBP16.19■□□□□ 0.18
TMPRSS4-206ENST00000519126 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
TMPRSS4-206ENST00000519126 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
TMPRSS4-206ENST00000519126 PCDH11XQ9BZA7 1347 aa16.19■□□□□ 0.18
TMPRSS4-206ENST00000519126 PCDH11YQ9BZA8 1340 aa16.19■□□□□ 0.18
TMPRSS4-206ENST00000519126 A0A1W2PP64 1363 aa16.18■□□□□ 0.18
TMPRSS4-206ENST00000519126 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
TMPRSS4-206ENST00000519126 HSPA1AP0DMV8 641 aaKnown RBP16.18■□□□□ 0.18
TMPRSS4-206ENST00000519126 HSPA1BP0DMV9 641 aaKnown RBP16.18■□□□□ 0.18
TMPRSS4-206ENST00000519126 KCPQ6ZWJ8 1503 aa16.18■□□□□ 0.18
TMPRSS4-206ENST00000519126 BRCA1P38398 1863 aaKnown RBP16.18■□□□□ 0.18
TMPRSS4-206ENST00000519126 MAP2P11137 1827 aaKnown RBP16.17■□□□□ 0.18
TMPRSS4-206ENST00000519126 PKD1L3Q7Z443 1732 aa16.17■□□□□ 0.18
TMPRSS4-206ENST00000519126 LINC00116Q8NCU8 138 aa16.17■□□□□ 0.18
TMPRSS4-206ENST00000519126 COG3Q96JB2 828 aa16.17■□□□□ 0.18
TMPRSS4-206ENST00000519126 RRAGCQ9HB90 399 aa16.17■□□□□ 0.18
TMPRSS4-206ENST00000519126 GNPATO15228 680 aa16.16■□□□□ 0.18
TMPRSS4-206ENST00000519126 DPEP1P16444 411 aa16.16■□□□□ 0.18
TMPRSS4-206ENST00000519126 ARFGEF1Q9Y6D6 1849 aa16.16■□□□□ 0.18
TMPRSS4-206ENST00000519126 LOC102724428A0A0B4J2F2 783 aa16.15■□□□□ 0.18
TMPRSS4-206ENST00000519126 SLC34A2O95436 690 aa16.15■□□□□ 0.18
TMPRSS4-206ENST00000519126 SIK1P57059 783 aa16.15■□□□□ 0.18
TMPRSS4-206ENST00000519126 SMC1BQ8NDV3 1235 aa16.15■□□□□ 0.18
TMPRSS4-206ENST00000519126 PIGBQ92521 554 aa16.15■□□□□ 0.18
TMPRSS4-206ENST00000519126 TNRC6CQ9HCJ0 1690 aaKnown RBP16.14■□□□□ 0.18
TMPRSS4-206ENST00000519126 C10orf71Q711Q0 1435 aa16.14■□□□□ 0.17
TMPRSS4-206ENST00000519126 CYP27B1O15528 508 aa16.14■□□□□ 0.17
TMPRSS4-206ENST00000519126 SLC24A1O60721 1099 aa16.14■□□□□ 0.17
TMPRSS4-206ENST00000519126 CLSPNQ9HAW4 1339 aa16.14■□□□□ 0.17
TMPRSS4-206ENST00000519126 NLGN1Q8N2Q7 840 aa16.13■□□□□ 0.17
TMPRSS4-206ENST00000519126 CCDC87Q9NVE4 849 aa16.13■□□□□ 0.17
TMPRSS4-206ENST00000519126 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
TMPRSS4-206ENST00000519126 SMG6Q86US8 1419 aaKnown RBP16.12■□□□□ 0.17
TMPRSS4-206ENST00000519126 TMF1P82094 1093 aa16.12■□□□□ 0.17
TMPRSS4-206ENST00000519126 ITPK1Q13572 414 aa16.12■□□□□ 0.17
TMPRSS4-206ENST00000519126 RRS1Q15050 365 aaKnown RBP16.12■□□□□ 0.17
TMPRSS4-206ENST00000519126 RNF181Q9P0P0 153 aa16.12■□□□□ 0.17
TMPRSS4-206ENST00000519126 TIMELESSQ9UNS1 1208 aa16.12■□□□□ 0.17
TMPRSS4-206ENST00000519126 SBF1O95248 1867 aa16.12■□□□□ 0.17
TMPRSS4-206ENST00000519126 ST20-MTHFSA0A0A6YYL1 179 aa16.11■□□□□ 0.17
TMPRSS4-206ENST00000519126 ATP6V1AP38606 617 aa16.11■□□□□ 0.17
TMPRSS4-206ENST00000519126 PUS7Q96PZ0 661 aaKnown RBP16.11■□□□□ 0.17
TMPRSS4-206ENST00000519126 C4AP0C0L4 1744 aa16.11■□□□□ 0.17
TMPRSS4-206ENST00000519126 KCNA3P22001 575 aa16.1■□□□□ 0.17
TMPRSS4-206ENST00000519126 TRAPPC3LQ5T215 181 aa16.1■□□□□ 0.17
TMPRSS4-206ENST00000519126 PIM2Q9P1W9 311 aa16.09■□□□□ 0.17
TMPRSS4-206ENST00000519126 PARP3Q9Y6F1 533 aa16.09■□□□□ 0.17
TMPRSS4-206ENST00000519126 DCAF5Q96JK2 942 aa16.08■□□□□ 0.16
TMPRSS4-206ENST00000519126 TESK2Q96S53 571 aa16.08■□□□□ 0.16
TMPRSS4-206ENST00000519126 ASAP1Q9ULH1 1129 aa16.08■□□□□ 0.16
TMPRSS4-206ENST00000519126 RTCBQ9Y3I0 505 aaKnown RBP16.08■□□□□ 0.16
TMPRSS4-206ENST00000519126 NKX1-1Q15270 411 aaPredicted RBP16.07■□□□□ 0.16
TMPRSS4-206ENST00000519126 DALRD3Q5D0E6 543 aaKnown RBP16.07■□□□□ 0.16
TMPRSS4-206ENST00000519126 TMOD3Q9NYL9 352 aa16.07■□□□□ 0.16
TMPRSS4-206ENST00000519126 PCNTO95613 3336 aa16.07■□□□□ 0.16
TMPRSS4-206ENST00000519126 HSP90AB2PQ58FF8 381 aa16.06■□□□□ 0.16
TMPRSS4-206ENST00000519126 ARHGEF1Q92888 912 aaKnown RBP16.06■□□□□ 0.16
TMPRSS4-206ENST00000519126 INSRP06213 1382 aa16.05■□□□□ 0.16
TMPRSS4-206ENST00000519126 GYS1P13807 737 aa16.05■□□□□ 0.16
TMPRSS4-206ENST00000519126 CCER1Q8TC90 406 aaPredicted RBP16.05■□□□□ 0.16
TMPRSS4-206ENST00000519126 VEGFAP15692 232 aaPredicted RBP16.04■□□□□ 0.16
TMPRSS4-206ENST00000519126 RFC4P35249 363 aa16.04■□□□□ 0.16
TMPRSS4-206ENST00000519126 SPG7Q9UQ90 795 aa16.04■□□□□ 0.16
TMPRSS4-206ENST00000519126 ATG3Q9NT62 314 aa16.03■□□□□ 0.16
TMPRSS4-206ENST00000519126 CDCA8Q53HL2 280 aa16.02■□□□□ 0.16
TMPRSS4-206ENST00000519126 GGNBP2Q9H3C7 697 aa16.02■□□□□ 0.16
TMPRSS4-206ENST00000519126 ZC3H4Q9UPT8 1303 aaKnown RBP16.01■□□□□ 0.15
TMPRSS4-206ENST00000519126 GLTPD2A6NH11 291 aa16.01■□□□□ 0.15
TMPRSS4-206ENST00000519126 RC3H1Q5TC82 1133 aaKnown RBP16.01■□□□□ 0.15
TMPRSS4-206ENST00000519126 CCDC88AQ3V6T2 1871 aa16.01■□□□□ 0.15
TMPRSS4-206ENST00000519126 FLT4P35916 1363 aa16■□□□□ 0.15
TMPRSS4-206ENST00000519126 FYB1O15117 783 aa16■□□□□ 0.15
TMPRSS4-206ENST00000519126 RPS6KA4O75676 772 aa16■□□□□ 0.15
TMPRSS4-206ENST00000519126 CHRNA5P30532 468 aa16■□□□□ 0.15
TMPRSS4-206ENST00000519126 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
TMPRSS4-206ENST00000519126 RASSF7Q02833 373 aa15.99■□□□□ 0.15
TMPRSS4-206ENST00000519126 SLC4A9Q96Q91 983 aa15.99■□□□□ 0.15
TMPRSS4-206ENST00000519126 KDRP35968 1356 aa15.99■□□□□ 0.15
TMPRSS4-206ENST00000519126 ZNF831Q5JPB2 1677 aa15.99■□□□□ 0.15
TMPRSS4-206ENST00000519126 MYH14Q7Z406 1995 aaKnown RBP15.98■□□□□ 0.15
TMPRSS4-206ENST00000519126 MKRN1Q9UHC7 482 aaKnown RBP15.98■□□□□ 0.15
TMPRSS4-206ENST00000519126 KIF24Q5T7B8 1368 aa15.98■□□□□ 0.15
TMPRSS4-206ENST00000519126 CNTNAP4Q9C0A0 1308 aa15.97■□□□□ 0.15
TMPRSS4-206ENST00000519126 FOXN1O15353 648 aa15.97■□□□□ 0.15
TMPRSS4-206ENST00000519126 LMNB1P20700 586 aa15.97■□□□□ 0.15
TMPRSS4-206ENST00000519126 IFNL2Q8IZJ0 200 aa15.97■□□□□ 0.15
TMPRSS4-206ENST00000519126 PRDM10Q9NQV6 1147 aa15.97■□□□□ 0.15
TMPRSS4-206ENST00000519126 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.97■□□□□ 0.15
TMPRSS4-206ENST00000519126 KDM6AO15550 1401 aaPredicted RBP15.96■□□□□ 0.15
TMPRSS4-206ENST00000519126 PHKG2P15735 406 aa15.96■□□□□ 0.15
TMPRSS4-206ENST00000519126 DDR1Q08345 913 aa15.96■□□□□ 0.15
TMPRSS4-206ENST00000519126 PCDH10Q9P2E7 1040 aa15.96■□□□□ 0.15
TMPRSS4-206ENST00000519126 NCAPD2Q15021 1401 aa15.95■□□□□ 0.14
TMPRSS4-206ENST00000519126 TIAM2Q8IVF5 1701 aa15.95■□□□□ 0.14
TMPRSS4-206ENST00000519126 FKBP8Q14318 412 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms