RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 NPC1L1Q9UHC9 1359 aa18.93■□□□□ 0.62
BRD9-217ENST00000519112 HSP90AB1P08238 724 aaKnown RBP18.92■□□□□ 0.62
BRD9-217ENST00000519112 POLD1P28340 1107 aa18.92■□□□□ 0.62
BRD9-217ENST00000519112 CNGB1Q14028 1251 aaPredicted RBP18.92■□□□□ 0.62
BRD9-217ENST00000519112 ATP6V1AP38606 617 aa18.91■□□□□ 0.62
BRD9-217ENST00000519112 MSL1Q68DK7 614 aa18.91■□□□□ 0.62
BRD9-217ENST00000519112 ZNF831Q5JPB2 1677 aa18.91■□□□□ 0.62
BRD9-217ENST00000519112 COL3A1P02461 1466 aaPredicted RBP18.9■□□□□ 0.62
BRD9-217ENST00000519112 DCAF8L1A6NGE4 600 aa18.9■□□□□ 0.62
BRD9-217ENST00000519112 HMOX1P09601 288 aa18.9■□□□□ 0.62
BRD9-217ENST00000519112 AK7Q96M32 723 aa18.9■□□□□ 0.62
BRD9-217ENST00000519112 COL5A3P25940 1745 aaPredicted RBP18.9■□□□□ 0.62
BRD9-217ENST00000519112 FLAD1Q8NFF5 587 aa18.89■□□□□ 0.61
BRD9-217ENST00000519112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.88■□□□□ 0.61
BRD9-217ENST00000519112 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
BRD9-217ENST00000519112 PHF14O94880 888 aa18.88■□□□□ 0.61
BRD9-217ENST00000519112 YY1P25490 414 aa18.88■□□□□ 0.61
BRD9-217ENST00000519112 HMGB2P26583 209 aaKnown RBP18.88■□□□□ 0.61
BRD9-217ENST00000519112 C1orf141Q5JVX7 400 aa18.88■□□□□ 0.61
BRD9-217ENST00000519112 KLHL34Q8N239 644 aa18.88■□□□□ 0.61
BRD9-217ENST00000519112 NLGN2Q8NFZ4 835 aa18.88■□□□□ 0.61
BRD9-217ENST00000519112 MYH14Q7Z406 1995 aaKnown RBP18.88■□□□□ 0.61
BRD9-217ENST00000519112 CABP4P57796 275 aa18.87■□□□□ 0.61
BRD9-217ENST00000519112 NFATC2IPQ8NCF5 419 aa18.87■□□□□ 0.61
BRD9-217ENST00000519112 CHD4Q14839 1912 aa18.86■□□□□ 0.61
BRD9-217ENST00000519112 RBM42Q9BTD8 480 aaKnown RBP18.86■□□□□ 0.61
BRD9-217ENST00000519112 SSFA2P28290 1259 aa18.85■□□□□ 0.61
BRD9-217ENST00000519112 AKAP4Q5JQC9 854 aa18.85■□□□□ 0.61
BRD9-217ENST00000519112 LGR6Q9HBX8 967 aa18.85■□□□□ 0.61
BRD9-217ENST00000519112 GNPATO15228 680 aa18.84■□□□□ 0.61
BRD9-217ENST00000519112 MTHFSDQ2M296 383 aaKnown RBP18.84■□□□□ 0.61
BRD9-217ENST00000519112 ADAMTS7Q9UKP4 1686 aa18.84■□□□□ 0.61
BRD9-217ENST00000519112 TJP1Q07157 1748 aa18.83■□□□□ 0.61
BRD9-217ENST00000519112 PTCD1O75127 700 aaKnown RBP18.81■□□□□ 0.6
BRD9-217ENST00000519112 MRC1P22897 1456 aa18.81■□□□□ 0.6
BRD9-217ENST00000519112 CICQ96RK0 1608 aaPredicted RBP18.81■□□□□ 0.6
BRD9-217ENST00000519112 RNMTO43148 476 aaKnown RBP18.8■□□□□ 0.6
BRD9-217ENST00000519112 SLC52A2Q9HAB3 445 aa18.8■□□□□ 0.6
BRD9-217ENST00000519112 C4AP0C0L4 1744 aa18.8■□□□□ 0.6
BRD9-217ENST00000519112 CNTNAP4Q9C0A0 1308 aa18.79■□□□□ 0.6
BRD9-217ENST00000519112 U2SURPO15042 1029 aaKnown RBP18.79■□□□□ 0.6
BRD9-217ENST00000519112 GPR162Q16538 588 aa18.79■□□□□ 0.6
BRD9-217ENST00000519112 RC3H1Q5TC82 1133 aaKnown RBP18.79■□□□□ 0.6
BRD9-217ENST00000519112 RTCBQ9Y3I0 505 aaKnown RBP18.78■□□□□ 0.6
BRD9-217ENST00000519112 YBX3P16989 372 aaKnown RBP eCLIP18.77■□□□□ 0.64e-6■□□□□ 8.3
BRD9-217ENST00000519112 PPP2R1AP30153 589 aa18.77■□□□□ 0.6
BRD9-217ENST00000519112 TRAPPC3LQ5T215 181 aa18.77■□□□□ 0.6
BRD9-217ENST00000519112 ARHGEF1Q92888 912 aaKnown RBP18.77■□□□□ 0.6
BRD9-217ENST00000519112 CD2APQ9Y5K6 639 aa18.77■□□□□ 0.6
BRD9-217ENST00000519112 RPS6KA4O75676 772 aa18.76■□□□□ 0.59
BRD9-217ENST00000519112 SLC39A6Q13433 755 aa18.76■□□□□ 0.59
BRD9-217ENST00000519112 PELP1Q8IZL8 1130 aaKnown RBP18.76■□□□□ 0.59
BRD9-217ENST00000519112 KCPQ6ZWJ8 1503 aa18.75■□□□□ 0.59
BRD9-217ENST00000519112 SIPA1L3O60292 1781 aaPredicted RBP18.75■□□□□ 0.59
BRD9-217ENST00000519112 UBR2Q8IWV8 1755 aa18.75■□□□□ 0.59
BRD9-217ENST00000519112 CRKLP46109 303 aaKnown RBP18.74■□□□□ 0.59
BRD9-217ENST00000519112 PHACTR3Q96KR7 559 aa18.74■□□□□ 0.59
BRD9-217ENST00000519112 KIF13BQ9NQT8 1826 aa18.74■□□□□ 0.59
BRD9-217ENST00000519112 ADRA2BP18089 450 aa18.73■□□□□ 0.59
BRD9-217ENST00000519112 INTS5Q6P9B9 1019 aaKnown RBP18.73■□□□□ 0.59
BRD9-217ENST00000519112 DNAJC10Q8IXB1 793 aa18.73■□□□□ 0.59
BRD9-217ENST00000519112 IL17REQ8NFR9 667 aa18.73■□□□□ 0.59
BRD9-217ENST00000519112 RSPH6AQ9H0K4 717 aa18.73■□□□□ 0.59
BRD9-217ENST00000519112 KIAA1551Q9HCM1 1747 aa18.72■□□□□ 0.59
BRD9-217ENST00000519112 MMP10P09238 476 aa18.72■□□□□ 0.59
BRD9-217ENST00000519112 GYS1P13807 737 aa18.72■□□□□ 0.59
BRD9-217ENST00000519112 ZNF784Q8NCA9 323 aaPredicted RBP18.72■□□□□ 0.59
BRD9-217ENST00000519112 PRKAR2BP31323 418 aa18.71■□□□□ 0.59
BRD9-217ENST00000519112 RFC4P35249 363 aa18.71■□□□□ 0.59
BRD9-217ENST00000519112 CFAP53Q96M91 514 aa18.71■□□□□ 0.59
BRD9-217ENST00000519112 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
BRD9-217ENST00000519112 NLGN1Q8N2Q7 840 aa18.7■□□□□ 0.58
BRD9-217ENST00000519112 GAS2L2Q8NHY3 880 aa18.7■□□□□ 0.58
BRD9-217ENST00000519112 N4BP2Q86UW6 1770 aaPredicted RBP18.69■□□□□ 0.58
BRD9-217ENST00000519112 CYP19A1P11511 503 aaPredicted RBP18.69■□□□□ 0.58
BRD9-217ENST00000519112 SRP68Q9UHB9 627 aaKnown RBP18.69■□□□□ 0.58
BRD9-217ENST00000519112 WWC3Q9ULE0 1092 aa18.68■□□□□ 0.58
BRD9-217ENST00000519112 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
BRD9-217ENST00000519112 CCDC87Q9NVE4 849 aa18.67■□□□□ 0.58
BRD9-217ENST00000519112 CEMIPQ8WUJ3 1361 aa18.67■□□□□ 0.58
BRD9-217ENST00000519112 GRIN3BO60391 1043 aa18.66■□□□□ 0.58
BRD9-217ENST00000519112 U2AF1L5P0DN76 240 aaPredicted RBP18.66■□□□□ 0.58
BRD9-217ENST00000519112 U2AF1Q01081 240 aaKnown RBP eCLIP18.66■□□□□ 0.58
BRD9-217ENST00000519112 FKBP8Q14318 412 aa18.66■□□□□ 0.58
BRD9-217ENST00000519112 NUDCQ9Y266 331 aa18.66■□□□□ 0.58
BRD9-217ENST00000519112 SOS1Q07889 1333 aaPredicted RBP18.66■□□□□ 0.58
BRD9-217ENST00000519112 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
BRD9-217ENST00000519112 VSIG10Q8N0Z9 540 aa18.65■□□□□ 0.58
BRD9-217ENST00000519112 ZBTB1Q9Y2K1 713 aa18.65■□□□□ 0.58
BRD9-217ENST00000519112 C10orf71Q711Q0 1435 aa18.65■□□□□ 0.58
BRD9-217ENST00000519112 TEFQ10587 303 aa18.64■□□□□ 0.57
BRD9-217ENST00000519112 ZNF790Q6PG37 636 aa18.64■□□□□ 0.57
BRD9-217ENST00000519112 ZNF496Q96IT1 587 aaPredicted RBP18.64■□□□□ 0.57
BRD9-217ENST00000519112 BRCA1P38398 1863 aaKnown RBP18.64■□□□□ 0.57
BRD9-217ENST00000519112 KCNQ3O43525 872 aa18.63■□□□□ 0.57
BRD9-217ENST00000519112 FCHSD2O94868 740 aa18.63■□□□□ 0.57
BRD9-217ENST00000519112 DDR1Q08345 913 aa18.63■□□□□ 0.57
BRD9-217ENST00000519112 DLG5Q8TDM6 1919 aa18.62■□□□□ 0.57
BRD9-217ENST00000519112 USPL1Q5W0Q7 1092 aa18.62■□□□□ 0.57
BRD9-217ENST00000519112 TTC5Q8N0Z6 440 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms