RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 WASLO00401 505 aaPredicted RBP6.56□□□□□ -1.36
PABPC1-209ENST00000519100 GPC1P35052 558 aa6.56□□□□□ -1.36
PABPC1-209ENST00000519100 CENPCQ03188 943 aa6.56□□□□□ -1.36
PABPC1-209ENST00000519100 KANK4Q5T7N3 995 aaPredicted RBP6.56□□□□□ -1.36
PABPC1-209ENST00000519100 PRICKLE2Q7Z3G6 844 aa6.56□□□□□ -1.36
PABPC1-209ENST00000519100 COL25A1Q9BXS0 654 aaPredicted RBP6.56□□□□□ -1.36
PABPC1-209ENST00000519100 INHAP05111 366 aa6.55□□□□□ -1.36
PABPC1-209ENST00000519100 KCNMA1Q12791 1236 aa6.55□□□□□ -1.36
PABPC1-209ENST00000519100 LYSMD3Q7Z3D4 306 aa6.55□□□□□ -1.36
PABPC1-209ENST00000519100 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.55□□□□□ -1.36
PABPC1-209ENST00000519100 ZNF358Q9NW07 568 aa6.55□□□□□ -1.36
PABPC1-209ENST00000519100 CUEDC1Q9NWM3 386 aaPredicted RBP6.55□□□□□ -1.36
PABPC1-209ENST00000519100 MKRN1Q9UHC7 482 aaKnown RBP6.55□□□□□ -1.36
PABPC1-209ENST00000519100 TIMELESSQ9UNS1 1208 aa6.55□□□□□ -1.36
PABPC1-209ENST00000519100 NOD1Q9Y239 953 aa6.55□□□□□ -1.36
PABPC1-209ENST00000519100 SPATA31C2B4DYI2 1134 aa6.54□□□□□ -1.36
PABPC1-209ENST00000519100 LZTS3O60299 673 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-209ENST00000519100 THBS1P07996 1170 aa6.54□□□□□ -1.36
PABPC1-209ENST00000519100 ITGA6P23229 1130 aa6.54□□□□□ -1.36
PABPC1-209ENST00000519100 EPHA4P54764 986 aa6.54□□□□□ -1.36
PABPC1-209ENST00000519100 POU4F2Q12837 409 aa6.54□□□□□ -1.36
PABPC1-209ENST00000519100 CRTC2Q53ET0 693 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-209ENST00000519100 RNFT1Q5M7Z0 435 aa6.54□□□□□ -1.36
PABPC1-209ENST00000519100 C14orf37Q86TY3 774 aa6.54□□□□□ -1.36
PABPC1-209ENST00000519100 VWA5B2Q8N398 1253 aa6.54□□□□□ -1.36
PABPC1-209ENST00000519100 IQSEC3Q9UPP2 1182 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-209ENST00000519100 LMOD1P29536 600 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-209ENST00000519100 GSK3AP49840 483 aa6.53□□□□□ -1.36
PABPC1-209ENST00000519100 SRPK2P78362 688 aaKnown RBP6.53□□□□□ -1.36
PABPC1-209ENST00000519100 MTFR1Q15390 333 aa6.53□□□□□ -1.36
PABPC1-209ENST00000519100 TLR1Q15399 786 aa6.53□□□□□ -1.36
PABPC1-209ENST00000519100 NBPF10Q6P3W6 841 aaKnown RBP6.53□□□□□ -1.36
PABPC1-209ENST00000519100 OGFOD1Q8N543 542 aa6.53□□□□□ -1.36
PABPC1-209ENST00000519100 NBPF15Q8N660 670 aa6.53□□□□□ -1.36
PABPC1-209ENST00000519100 SIRT1Q96EB6 747 aa6.53□□□□□ -1.36
PABPC1-209ENST00000519100 NLRP3Q96P20 1036 aa6.53□□□□□ -1.36
PABPC1-209ENST00000519100 SERTAD1Q9UHV2 236 aa6.53□□□□□ -1.36
PABPC1-209ENST00000519100 CDC14CA4D256 554 aa6.52□□□□□ -1.37
PABPC1-209ENST00000519100 C4orf17Q53FE4 359 aa6.52□□□□□ -1.37
PABPC1-209ENST00000519100 ESCO1Q5FWF5 840 aa6.52□□□□□ -1.37
PABPC1-209ENST00000519100 SV2AQ7L0J3 742 aa6.52□□□□□ -1.37
PABPC1-209ENST00000519100 SIX5Q8N196 739 aa6.52□□□□□ -1.37
PABPC1-209ENST00000519100 TPCN2Q8NHX9 752 aa6.52□□□□□ -1.37
PABPC1-209ENST00000519100 TRIM52Q96A61 297 aa6.52□□□□□ -1.37
PABPC1-209ENST00000519100 ZNF594Q96JF6 807 aaPredicted RBP6.52□□□□□ -1.37
PABPC1-209ENST00000519100 SLC4A9Q96Q91 983 aa6.52□□□□□ -1.37
PABPC1-209ENST00000519100 ESF1Q9H501 851 aaKnown RBP6.52□□□□□ -1.37
PABPC1-209ENST00000519100 ADAMTS8Q9UP79 889 aa6.52□□□□□ -1.37
PABPC1-209ENST00000519100 SMTNP53814 917 aa6.51□□□□□ -1.37
PABPC1-209ENST00000519100 FOXK2Q01167 660 aa6.51□□□□□ -1.37
PABPC1-209ENST00000519100 PTK7Q13308 1070 aa6.51□□□□□ -1.37
PABPC1-209ENST00000519100 SLC27A3Q5K4L6 730 aa6.51□□□□□ -1.37
PABPC1-209ENST00000519100 ZNF385CQ66K41 422 aaPredicted RBP6.51□□□□□ -1.37
PABPC1-209ENST00000519100 ARXQ96QS3 562 aa6.51□□□□□ -1.37
PABPC1-209ENST00000519100 ZSCAN10Q96SZ4 725 aaPredicted RBP6.51□□□□□ -1.37
PABPC1-209ENST00000519100 DNAAF2Q9NVR5 837 aaKnown RBP6.51□□□□□ -1.37
PABPC1-209ENST00000519100 SFI1A8K8P3 1242 aa6.5□□□□□ -1.37
PABPC1-209ENST00000519100 PHKA2P46019 1235 aa6.5□□□□□ -1.37
PABPC1-209ENST00000519100 CDCA8Q53HL2 280 aa6.5□□□□□ -1.37
PABPC1-209ENST00000519100 CCDC102BQ68D86 513 aa6.5□□□□□ -1.37
PABPC1-209ENST00000519100 PPARGC1BQ86YN6 1023 aaKnown RBP6.5□□□□□ -1.37
PABPC1-209ENST00000519100 KCTD17Q8N5Z5 321 aa6.5□□□□□ -1.37
PABPC1-209ENST00000519100 ZDHHC1Q8WTX9 485 aa6.5□□□□□ -1.37
PABPC1-209ENST00000519100 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-209ENST00000519100 A6NJY4 79 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 USP17L15C9J2P7 530 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 USP17L10C9JJH3 530 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 USP17L13C9JLJ4 530 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 USP17L12C9JPN9 530 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 USP17L11C9JVI0 530 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 USP17L21D6R901 530 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 USP17L18D6R9N7 530 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 USP17L22D6RA61 530 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 USP17L17D6RBQ6 530 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 USP17L19D6RCP7 530 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 USP17L20D6RJB6 530 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 SLURP2P0DP57 97 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 RFX1P22670 979 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 RASSF7Q02833 373 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 PSME1Q06323 249 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 USP17L24Q0WX57 530 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 TBCELQ5QJ74 424 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 SH3PXD2AQ5TCZ1 1133 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 TAS1R3Q7RTX0 852 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 TRIM50Q86XT4 487 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 TNS4Q8IZW8 715 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 LARGE2Q8N3Y3 721 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 TMEM151AQ8N4L1 468 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 SVOPQ8N4V2 548 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 WHAMMQ8TF30 809 aa6.49□□□□□ -1.37
PABPC1-209ENST00000519100 LGR5O75473 907 aa6.48□□□□□ -1.37
PABPC1-209ENST00000519100 GDF11O95390 407 aa6.48□□□□□ -1.37
PABPC1-209ENST00000519100 RASA1P20936 1047 aa6.48□□□□□ -1.37
PABPC1-209ENST00000519100 CCDC82Q8N4S0 544 aa6.48□□□□□ -1.37
PABPC1-209ENST00000519100 TSEN2Q8NCE0 465 aaKnown RBP6.48□□□□□ -1.37
PABPC1-209ENST00000519100 RHBDD1Q8TEB9 315 aa6.48□□□□□ -1.37
PABPC1-209ENST00000519100 KLRG1Q96E93 195 aa6.48□□□□□ -1.37
PABPC1-209ENST00000519100 SCHIP1Q9P0W5 487 aaPredicted RBP6.48□□□□□ -1.37
PABPC1-209ENST00000519100 ZMIZ1Q9ULJ6 1067 aa6.48□□□□□ -1.37
PABPC1-209ENST00000519100 FAM196BA6NMK8 535 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms