RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	GAS2L2	Q8NHY3	880 aa		32.37	■■■□□ 2.77
CNOT7-204	ENST00000518885	TAF1L	Q8IZX4	1826 aa		32.37	■■■□□ 2.77
CNOT7-204	ENST00000518885	C4B	P0C0L5	1744 aa		32.37	■■■□□ 2.77
CNOT7-204	ENST00000518885	MTHFSD	Q2M296	383 aa	Known RBP	32.35	■■■□□ 2.77
CNOT7-204	ENST00000518885	NFATC2IP	Q8NCF5	419 aa		32.35	■■■□□ 2.77
CNOT7-204	ENST00000518885	ARX	Q96QS3	562 aa		32.35	■■■□□ 2.77
CNOT7-204	ENST00000518885	RBM42	Q9BTD8	480 aa	Known RBP	32.35	■■■□□ 2.77
CNOT7-204	ENST00000518885	TUBGCP6	Q96RT7	1819 aa		32.35	■■■□□ 2.77
CNOT7-204	ENST00000518885	SGIP1	Q9BQI5	828 aa		32.33	■■■□□ 2.77
CNOT7-204	ENST00000518885	COL23A1	Q86Y22	540 aa	Predicted RBP	32.32	■■■□□ 2.76
CNOT7-204	ENST00000518885	SCN11A	Q9UI33	1791 aa		32.32	■■■□□ 2.76
CNOT7-204	ENST00000518885	ZNF831	Q5JPB2	1677 aa		32.31	■■■□□ 2.76
CNOT7-204	ENST00000518885	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.31	■■■□□ 2.76
CNOT7-204	ENST00000518885	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.31	■■■□□ 2.76
CNOT7-204	ENST00000518885	SLC52A2	Q9HAB3	445 aa		32.31	■■■□□ 2.76
CNOT7-204	ENST00000518885	RNMT	O43148	476 aa	Known RBP	32.3	■■■□□ 2.76
CNOT7-204	ENST00000518885	SSFA2	P28290	1259 aa		32.3	■■■□□ 2.76
CNOT7-204	ENST00000518885	LINC00116	Q8NCU8	138 aa		32.3	■■■□□ 2.76
CNOT7-204	ENST00000518885	ITPK1	Q13572	414 aa		32.28	■■■□□ 2.76
CNOT7-204	ENST00000518885	MAP3K5	Q99683	1374 aa		32.28	■■■□□ 2.76
CNOT7-204	ENST00000518885	GNAT3	A8MTJ3	354 aa		32.27	■■■□□ 2.76
CNOT7-204	ENST00000518885	FCHSD2	O94868	740 aa		32.27	■■■□□ 2.76
CNOT7-204	ENST00000518885	PRKAR2B	P31323	418 aa		32.27	■■■□□ 2.76
CNOT7-204	ENST00000518885	RALBP1	Q15311	655 aa		32.27	■■■□□ 2.76
CNOT7-204	ENST00000518885	MRC1	P22897	1456 aa		32.27	■■■□□ 2.76
CNOT7-204	ENST00000518885	GNPAT	O15228	680 aa		32.26	■■■□□ 2.75
CNOT7-204	ENST00000518885	NEFM	P07197	916 aa		32.26	■■■□□ 2.75
CNOT7-204	ENST00000518885	FHDC1	Q9C0D6	1143 aa	Predicted RBP	32.26	■■■□□ 2.75
CNOT7-204	ENST00000518885	RSPH6A	Q9H0K4	717 aa		32.26	■■■□□ 2.75
CNOT7-204	ENST00000518885	LGR6	Q9HBX8	967 aa		32.26	■■■□□ 2.75
CNOT7-204	ENST00000518885	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.25	■■■□□ 2.75
CNOT7-204	ENST00000518885	PTCD1	O75127	700 aa	Known RBP	32.25	■■■□□ 2.75
CNOT7-204	ENST00000518885	PHF14	O94880	888 aa		32.25	■■■□□ 2.75
CNOT7-204	ENST00000518885	DDX10	Q13206	875 aa	Known RBP	32.25	■■■□□ 2.75
CNOT7-204	ENST00000518885	RC3H1	Q5TC82	1133 aa	Known RBP	32.24	■■■□□ 2.75
CNOT7-204	ENST00000518885	COL24A1	Q17RW2	1714 aa		32.23	■■■□□ 2.75
CNOT7-204	ENST00000518885	RTCB	Q9Y3I0	505 aa	Known RBP	32.23	■■■□□ 2.75
CNOT7-204	ENST00000518885	ADAMTS7	Q9UKP4	1686 aa		32.22	■■■□□ 2.75
CNOT7-204	ENST00000518885	TEF	Q10587	303 aa		32.22	■■■□□ 2.75
CNOT7-204	ENST00000518885	SYT17	Q9BSW7	474 aa		32.22	■■■□□ 2.75
CNOT7-204	ENST00000518885	CNTNAP4	Q9C0A0	1308 aa		32.22	■■■□□ 2.75
CNOT7-204	ENST00000518885	UBR3	Q6ZT12	1888 aa		32.21	■■■□□ 2.75
CNOT7-204	ENST00000518885	ADRA2B	P18089	450 aa		32.2	■■■□□ 2.75
CNOT7-204	ENST00000518885	PNN	Q9H307	717 aa	Known RBP	32.2	■■■□□ 2.75
CNOT7-204	ENST00000518885	SLC4A9	Q96Q91	983 aa		32.19	■■■□□ 2.74
CNOT7-204	ENST00000518885	TRAPPC3L	Q5T215	181 aa		32.18	■■■□□ 2.74
CNOT7-204	ENST00000518885	TTC5	Q8N0Z6	440 aa		32.18	■■■□□ 2.74
CNOT7-204	ENST00000518885	RTF1	Q92541	710 aa	Known RBP	32.17	■■■□□ 2.74
CNOT7-204	ENST00000518885	MSL1	Q68DK7	614 aa		32.16	■■■□□ 2.74
CNOT7-204	ENST00000518885	KLHL34	Q8N239	644 aa		32.16	■■■□□ 2.74
CNOT7-204	ENST00000518885	PHACTR3	Q96KR7	559 aa		32.16	■■■□□ 2.74
CNOT7-204	ENST00000518885	CIC	Q96RK0	1608 aa	Predicted RBP	32.15	■■■□□ 2.74
CNOT7-204	ENST00000518885	COL5A3	P25940	1745 aa	Predicted RBP	32.15	■■■□□ 2.74
CNOT7-204	ENST00000518885	VIRMA	Q69YN4	1812 aa	Known RBP	32.14	■■■□□ 2.74
CNOT7-204	ENST00000518885	RPS6KA4	O75676	772 aa		32.14	■■■□□ 2.74
CNOT7-204	ENST00000518885	VSIG10	Q8N0Z9	540 aa		32.13	■■■□□ 2.73
CNOT7-204	ENST00000518885	AMIGO3	Q86WK7	504 aa		32.12	■■■□□ 2.73
CNOT7-204	ENST00000518885	IL17RE	Q8NFR9	667 aa		32.12	■■■□□ 2.73
CNOT7-204	ENST00000518885	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.11	■■■□□ 2.73
CNOT7-204	ENST00000518885	RFC4	P35249	363 aa		32.11	■■■□□ 2.73
CNOT7-204	ENST00000518885	CRKL	P46109	303 aa	Known RBP	32.11	■■■□□ 2.73
CNOT7-204	ENST00000518885	SLC39A6	Q13433	755 aa		32.11	■■■□□ 2.73
CNOT7-204	ENST00000518885	HTATSF1	O43719	755 aa	Known RBP	32.1	■■■□□ 2.73
CNOT7-204	ENST00000518885	CEMIP	Q8WUJ3	1361 aa		32.09	■■■□□ 2.73
CNOT7-204	ENST00000518885	NLGN1	Q8N2Q7	840 aa		32.08	■■■□□ 2.73
CNOT7-204	ENST00000518885	TJP1	Q07157	1748 aa		32.07	■■■□□ 2.72
CNOT7-204	ENST00000518885	KCP	Q6ZWJ8	1503 aa		32.06	■■■□□ 2.72
CNOT7-204	ENST00000518885	MAPK8IP3	Q9UPT6	1336 aa		32.06	■■■□□ 2.72
CNOT7-204	ENST00000518885	ZNF790	Q6PG37	636 aa		32.06	■■■□□ 2.72
CNOT7-204	ENST00000518885	SMIM5	Q71RC9	77 aa		32.06	■■■□□ 2.72
CNOT7-204	ENST00000518885	ARHGEF1	Q92888	912 aa	Known RBP	32.06	■■■□□ 2.72
CNOT7-204	ENST00000518885	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.06	■■■□□ 2.72
CNOT7-204	ENST00000518885	CCDC87	Q9NVE4	849 aa		32.06	■■■□□ 2.72
CNOT7-204	ENST00000518885	DNAJC10	Q8IXB1	793 aa		32.05	■■■□□ 2.72
CNOT7-204	ENST00000518885	CD2AP	Q9Y5K6	639 aa		32.05	■■■□□ 2.72
CNOT7-204	ENST00000518885	BTBD11	A6QL63	1104 aa		32.04	■■■□□ 2.72
CNOT7-204	ENST00000518885	STARD3NL	O95772	234 aa		32.04	■■■□□ 2.72
CNOT7-204	ENST00000518885	UBR2	Q8IWV8	1755 aa		32.02	■■■□□ 2.72
CNOT7-204	ENST00000518885	CYP19A1	P11511	503 aa	Predicted RBP	32.02	■■■□□ 2.72
CNOT7-204	ENST00000518885	FMNL2	Q96PY5	1086 aa		32.02	■■■□□ 2.72
CNOT7-204	ENST00000518885	SIPA1L3	O60292	1781 aa	Predicted RBP	32	■■■□□ 2.71
CNOT7-204	ENST00000518885	INTS5	Q6P9B9	1019 aa	Known RBP	32	■■■□□ 2.71
CNOT7-204	ENST00000518885	GPR162	Q16538	588 aa		31.99	■■■□□ 2.71
CNOT7-204	ENST00000518885	MCM10	Q7L590	875 aa		31.99	■■■□□ 2.71
CNOT7-204	ENST00000518885	HEG1	Q9ULI3	1381 aa		31.98	■■■□□ 2.71
CNOT7-204	ENST00000518885	MMP10	P09238	476 aa		31.97	■■■□□ 2.71
CNOT7-204	ENST00000518885	ZNF496	Q96IT1	587 aa	Predicted RBP	31.97	■■■□□ 2.71
CNOT7-204	ENST00000518885	PLEKHF1	Q96S99	279 aa		31.97	■■■□□ 2.71
CNOT7-204	ENST00000518885	MYH14	Q7Z406	1995 aa	Known RBP	31.97	■■■□□ 2.71
CNOT7-204	ENST00000518885	ZPR1	O75312	459 aa		31.96	■■■□□ 2.71
CNOT7-204	ENST00000518885	GYS1	P13807	737 aa		31.96	■■■□□ 2.71
CNOT7-204	ENST00000518885	NFE2L2	Q16236	605 aa		31.96	■■■□□ 2.71
CNOT7-204	ENST00000518885	NLGN2	Q8NFZ4	835 aa		31.95	■■■□□ 2.71
CNOT7-204	ENST00000518885	SOS1	Q07889	1333 aa	Predicted RBP	31.95	■■■□□ 2.7
CNOT7-204	ENST00000518885	USP42	Q9H9J4	1324 aa	Known RBP	31.95	■■■□□ 2.7
CNOT7-204	ENST00000518885	WDR43	Q15061	677 aa	Known RBP eCLIP	31.94	■■■□□ 2.7
CNOT7-204	ENST00000518885	PRKRIP1	Q9H875	184 aa	Predicted RBP	31.94	■■■□□ 2.7
CNOT7-204	ENST00000518885	PARP3	Q9Y6F1	533 aa		31.94	■■■□□ 2.7
CNOT7-204	ENST00000518885	C4A	P0C0L4	1744 aa		31.93	■■■□□ 2.7
CNOT7-204	ENST00000518885	YY1	P25490	414 aa		31.93	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms