RNA–Protein interactions for RNA: ENST00000518847.1

TRAPPC2-206, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-206ENST00000518847 E9PSI1 815 aa15.4■□□□□ 0.06
TRAPPC2-206ENST00000518847 PRIM1P49642 420 aaKnown RBP15.4■□□□□ 0.06
TRAPPC2-206ENST00000518847 MCM10Q7L590 875 aa15.4■□□□□ 0.06
TRAPPC2-206ENST00000518847 NFATC2IPQ8NCF5 419 aa15.4■□□□□ 0.06
TRAPPC2-206ENST00000518847 KDM6AO15550 1401 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC2-206ENST00000518847 NHSQ6T4R5 1651 aa15.39■□□□□ 0.05
TRAPPC2-206ENST00000518847 TEX13AQ9BXU3 409 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC2-206ENST00000518847 LGR6Q9HBX8 967 aa15.39■□□□□ 0.05
TRAPPC2-206ENST00000518847 UPF1Q92900 1129 aaKnown RBP eCLIP15.38■□□□□ 0.05
TRAPPC2-206ENST00000518847 TSPYL4Q9UJ04 414 aa15.38■□□□□ 0.05
TRAPPC2-206ENST00000518847 VIRMAQ69YN4 1812 aaKnown RBP15.38■□□□□ 0.05
TRAPPC2-206ENST00000518847 DOT1LQ8TEK3 1739 aa15.37■□□□□ 0.05
TRAPPC2-206ENST00000518847 PLSCR1O15162 318 aa15.37■□□□□ 0.05
TRAPPC2-206ENST00000518847 VSIG10Q8N0Z9 540 aa15.37■□□□□ 0.05
TRAPPC2-206ENST00000518847 CHL1O00533 1208 aa15.36■□□□□ 0.05
TRAPPC2-206ENST00000518847 BAG6P46379 1132 aa15.36■□□□□ 0.05
TRAPPC2-206ENST00000518847 ZNF790Q6PG37 636 aa15.36■□□□□ 0.05
TRAPPC2-206ENST00000518847 PIGBQ92521 554 aa15.36■□□□□ 0.05
TRAPPC2-206ENST00000518847 ACSBG1Q96GR2 724 aa15.36■□□□□ 0.05
TRAPPC2-206ENST00000518847 FMNL2Q96PY5 1086 aa15.36■□□□□ 0.05
TRAPPC2-206ENST00000518847 ZNF521Q96K83 1311 aa15.36■□□□□ 0.05
TRAPPC2-206ENST00000518847 EP400Q96L91 3159 aa15.36■□□□□ 0.05
TRAPPC2-206ENST00000518847 ITGB4P16144 1822 aa15.36■□□□□ 0.05
TRAPPC2-206ENST00000518847 SBF2Q86WG5 1849 aa15.36■□□□□ 0.05
TRAPPC2-206ENST00000518847 HOXB7P09629 217 aa15.35■□□□□ 0.05
TRAPPC2-206ENST00000518847 CT47B1P0C2W7 299 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC2-206ENST00000518847 DCTN1Q14203 1278 aa15.35■□□□□ 0.05
TRAPPC2-206ENST00000518847 SLC27A3Q5K4L6 730 aa15.35■□□□□ 0.05
TRAPPC2-206ENST00000518847 SALL2Q9Y467 1007 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC2-206ENST00000518847 LAS1LQ9Y4W2 734 aaKnown RBP15.35■□□□□ 0.05
TRAPPC2-206ENST00000518847 TRIM37O94972 964 aa15.34■□□□□ 0.05
TRAPPC2-206ENST00000518847 ZNF428Q96B54 188 aa15.34■□□□□ 0.05
TRAPPC2-206ENST00000518847 APBA3O96018 575 aa15.33■□□□□ 0.04
TRAPPC2-206ENST00000518847 ZNF853P0CG23 659 aa15.33■□□□□ 0.04
TRAPPC2-206ENST00000518847 SIPA1L3O60292 1781 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC2-206ENST00000518847 TOGARAM1Q9Y4F4 1720 aa15.32■□□□□ 0.04
TRAPPC2-206ENST00000518847 RGPD3A6NKT7 1758 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC2-206ENST00000518847 RGPD4Q7Z3J3 1758 aa15.32■□□□□ 0.04
TRAPPC2-206ENST00000518847 FAM182BQ5T319 152 aa15.32■□□□□ 0.04
TRAPPC2-206ENST00000518847 STARD3NLO95772 234 aa15.31■□□□□ 0.04
TRAPPC2-206ENST00000518847 SNRPA1P09661 255 aaKnown RBP15.31■□□□□ 0.04
TRAPPC2-206ENST00000518847 ATG3Q9NT62 314 aa15.31■□□□□ 0.04
TRAPPC2-206ENST00000518847 PALLDQ8WX93 1383 aa15.31■□□□□ 0.04
TRAPPC2-206ENST00000518847 BTAF1O14981 1849 aa15.3■□□□□ 0.04
TRAPPC2-206ENST00000518847 KCNQ2O43526 872 aa15.3■□□□□ 0.04
TRAPPC2-206ENST00000518847 SLFN5Q08AF3 891 aa15.3■□□□□ 0.04
TRAPPC2-206ENST00000518847 ZNF831Q5JPB2 1677 aa15.3■□□□□ 0.04
TRAPPC2-206ENST00000518847 NPM2Q86SE8 214 aaKnown RBP15.3■□□□□ 0.04
TRAPPC2-206ENST00000518847 THUMPD2Q9BTF0 503 aaKnown RBP15.3■□□□□ 0.04
TRAPPC2-206ENST00000518847 LOC102724428A0A0B4J2F2 783 aa15.29■□□□□ 0.04
TRAPPC2-206ENST00000518847 SIK1P57059 783 aa15.29■□□□□ 0.04
TRAPPC2-206ENST00000518847 MBIPQ9NS73 344 aa15.29■□□□□ 0.04
TRAPPC2-206ENST00000518847 ASAP1Q9ULH1 1129 aa15.29■□□□□ 0.04
TRAPPC2-206ENST00000518847 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
TRAPPC2-206ENST00000518847 KDM3BQ7LBC6 1761 aa15.28■□□□□ 0.04
TRAPPC2-206ENST00000518847 PAPPAQ13219 1627 aa15.28■□□□□ 0.04
TRAPPC2-206ENST00000518847 HEG1Q9ULI3 1381 aa15.27■□□□□ 0.04
TRAPPC2-206ENST00000518847 ERBB4Q15303 1308 aa15.27■□□□□ 0.04
TRAPPC2-206ENST00000518847 FANCIQ9NVI1 1328 aa15.27■□□□□ 0.04
TRAPPC2-206ENST00000518847 ATP6V1AP38606 617 aa15.27■□□□□ 0.04
TRAPPC2-206ENST00000518847 EIF4A1P60842 406 aaKnown RBP15.27■□□□□ 0.04
TRAPPC2-206ENST00000518847 YTHDC1Q96MU7 727 aaKnown RBP15.27■□□□□ 0.04
TRAPPC2-206ENST00000518847 CCNL1Q9UK58 526 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC2-206ENST00000518847 PTCD1O75127 700 aaKnown RBP15.26■□□□□ 0.03
TRAPPC2-206ENST00000518847 SLC39A6Q13433 755 aa15.26■□□□□ 0.03
TRAPPC2-206ENST00000518847 TRMT2AQ8IZ69 625 aaKnown RBP15.26■□□□□ 0.03
TRAPPC2-206ENST00000518847 ZNF496Q96IT1 587 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC2-206ENST00000518847 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
TRAPPC2-206ENST00000518847 GIGYF1O75420 1035 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC2-206ENST00000518847 CCDC30Q5VVM6 783 aa15.25■□□□□ 0.03
TRAPPC2-206ENST00000518847 TNS1Q9HBL0 1735 aaKnown RBP15.25■□□□□ 0.03
TRAPPC2-206ENST00000518847 CICQ96RK0 1608 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC2-206ENST00000518847 LY75O60449 1722 aa15.24■□□□□ 0.03
TRAPPC2-206ENST00000518847 TXNRD1Q16881 649 aa15.24■□□□□ 0.03
TRAPPC2-206ENST00000518847 TWISTNBQ3B726 338 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC2-206ENST00000518847 RC3H1Q5TC82 1133 aaKnown RBP15.24■□□□□ 0.03
TRAPPC2-206ENST00000518847 NBPF14Q5TI25 921 aa15.24■□□□□ 0.03
TRAPPC2-206ENST00000518847 STK31Q9BXU1 1019 aa15.24■□□□□ 0.03
TRAPPC2-206ENST00000518847 MIS18AQ9NYP9 233 aa15.24■□□□□ 0.03
TRAPPC2-206ENST00000518847 DUSP27Q5VZP5 1158 aa15.23■□□□□ 0.03
TRAPPC2-206ENST00000518847 FLAD1Q8NFF5 587 aa15.23■□□□□ 0.03
TRAPPC2-206ENST00000518847 KCPQ6ZWJ8 1503 aa15.22■□□□□ 0.03
TRAPPC2-206ENST00000518847 HDGFL1Q5TGJ6 251 aa15.22■□□□□ 0.03
TRAPPC2-206ENST00000518847 TSR2Q969E8 191 aaKnown RBP15.22■□□□□ 0.03
TRAPPC2-206ENST00000518847 DBF4Q9UBU7 674 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC2-206ENST00000518847 CNTNAP4Q9C0A0 1308 aa15.21■□□□□ 0.03
TRAPPC2-206ENST00000518847 A0A087WZG4 1122 aa15.21■□□□□ 0.03
TRAPPC2-206ENST00000518847 ADRA2BP18089 450 aa15.21■□□□□ 0.03
TRAPPC2-206ENST00000518847 CAMKK2Q96RR4 588 aa15.21■□□□□ 0.03
TRAPPC2-206ENST00000518847 CACNA1FO60840 1977 aa15.2■□□□□ 0.02
TRAPPC2-206ENST00000518847 EXOSC9Q06265 439 aaKnown RBP15.2■□□□□ 0.02
TRAPPC2-206ENST00000518847 ALDH1L2Q3SY69 923 aa15.2■□□□□ 0.02
TRAPPC2-206ENST00000518847 AK7Q96M32 723 aa15.2■□□□□ 0.02
TRAPPC2-206ENST00000518847 HYPKQ9NX55 129 aa15.2■□□□□ 0.02
TRAPPC2-206ENST00000518847 C5P01031 1676 aa15.19■□□□□ 0.02
TRAPPC2-206ENST00000518847 SENP3-EIF4A1A0A087X0R7 540 aa15.19■□□□□ 0.02
TRAPPC2-206ENST00000518847 EN1Q05925 392 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC2-206ENST00000518847 CDCA7LQ96GN5 454 aa15.19■□□□□ 0.02
TRAPPC2-206ENST00000518847 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
TRAPPC2-206ENST00000518847 STK32BQ9NY57 414 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms