RNA–Protein interactions for RNA: ENST00000518691.1

ARFGAP1-208, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 1,162 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-208ENST00000518691 ITPK1Q13572 414 aa26.22■■□□□ 1.79
ARFGAP1-208ENST00000518691 LINC00116Q8NCU8 138 aa26.22■■□□□ 1.79
ARFGAP1-208ENST00000518691 AK7Q96M32 723 aa26.21■■□□□ 1.79
ARFGAP1-208ENST00000518691 ATP6V1AP38606 617 aa26.19■■□□□ 1.78
ARFGAP1-208ENST00000518691 CC2D1BQ5T0F9 858 aaKnown RBP26.19■■□□□ 1.78
ARFGAP1-208ENST00000518691 SSFA2P28290 1259 aa26.18■■□□□ 1.78
ARFGAP1-208ENST00000518691 SLC4A9Q96Q91 983 aa26.18■■□□□ 1.78
ARFGAP1-208ENST00000518691 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.17■■□□□ 1.78
ARFGAP1-208ENST00000518691 C1orf141Q5JVX7 400 aa26.17■■□□□ 1.78
ARFGAP1-208ENST00000518691 MSL1Q68DK7 614 aa26.17■■□□□ 1.78
ARFGAP1-208ENST00000518691 SCN11AQ9UI33 1791 aa26.16■■□□□ 1.78
ARFGAP1-208ENST00000518691 CABP4P57796 275 aa26.15■■□□□ 1.78
ARFGAP1-208ENST00000518691 CHD4Q14839 1912 aa26.15■■□□□ 1.78
ARFGAP1-208ENST00000518691 SMIM5Q71RC9 77 aa26.14■■□□□ 1.78
ARFGAP1-208ENST00000518691 NLGN2Q8NFZ4 835 aa26.14■■□□□ 1.78
ARFGAP1-208ENST00000518691 COL5A3P25940 1745 aaPredicted RBP26.14■■□□□ 1.77
ARFGAP1-208ENST00000518691 COL3A1P02461 1466 aaPredicted RBP26.13■■□□□ 1.77
ARFGAP1-208ENST00000518691 DIAPH1O60610 1272 aaKnown RBP26.13■■□□□ 1.77
ARFGAP1-208ENST00000518691 PHF14O94880 888 aa26.12■■□□□ 1.77
ARFGAP1-208ENST00000518691 AKAP4Q5JQC9 854 aa26.12■■□□□ 1.77
ARFGAP1-208ENST00000518691 KLHL34Q8N239 644 aa26.12■■□□□ 1.77
ARFGAP1-208ENST00000518691 NFATC2IPQ8NCF5 419 aa26.12■■□□□ 1.77
ARFGAP1-208ENST00000518691 GOLGB1Q14789 3259 aaKnown RBP26.12■■□□□ 1.77
ARFGAP1-208ENST00000518691 GNPATO15228 680 aa26.11■■□□□ 1.77
ARFGAP1-208ENST00000518691 RC3H1Q5TC82 1133 aaKnown RBP26.11■■□□□ 1.77
ARFGAP1-208ENST00000518691 HMOX1P09601 288 aa26.1■■□□□ 1.77
ARFGAP1-208ENST00000518691 RBM42Q9BTD8 480 aaKnown RBP26.1■■□□□ 1.77
ARFGAP1-208ENST00000518691 CD2APQ9Y5K6 639 aa26.1■■□□□ 1.77
ARFGAP1-208ENST00000518691 CICQ96RK0 1608 aaPredicted RBP26.1■■□□□ 1.77
ARFGAP1-208ENST00000518691 ADAMTS7Q9UKP4 1686 aa26.09■■□□□ 1.77
ARFGAP1-208ENST00000518691 CNTNAP4Q9C0A0 1308 aa26.09■■□□□ 1.77
ARFGAP1-208ENST00000518691 MYH14Q7Z406 1995 aaKnown RBP26.08■■□□□ 1.77
ARFGAP1-208ENST00000518691 GPR162Q16538 588 aa26.08■■□□□ 1.77
ARFGAP1-208ENST00000518691 MRC1P22897 1456 aa26.07■■□□□ 1.76
ARFGAP1-208ENST00000518691 VIRMAQ69YN4 1812 aaKnown RBP26.07■■□□□ 1.76
ARFGAP1-208ENST00000518691 MTHFSDQ2M296 383 aaKnown RBP26.05■■□□□ 1.76
ARFGAP1-208ENST00000518691 SLC52A2Q9HAB3 445 aa26.05■■□□□ 1.76
ARFGAP1-208ENST00000518691 LGR6Q9HBX8 967 aa26.05■■□□□ 1.76
ARFGAP1-208ENST00000518691 RTCBQ9Y3I0 505 aaKnown RBP26.05■■□□□ 1.76
ARFGAP1-208ENST00000518691 RNMTO43148 476 aaKnown RBP26.04■■□□□ 1.76
ARFGAP1-208ENST00000518691 ADRA2BP18089 450 aa26.04■■□□□ 1.76
ARFGAP1-208ENST00000518691 TJP1Q07157 1748 aa26.04■■□□□ 1.76
ARFGAP1-208ENST00000518691 PTCD1O75127 700 aaKnown RBP26.03■■□□□ 1.76
ARFGAP1-208ENST00000518691 RPS6KA4O75676 772 aa26.03■■□□□ 1.76
ARFGAP1-208ENST00000518691 TRAPPC3LQ5T215 181 aa26.03■■□□□ 1.76
ARFGAP1-208ENST00000518691 YBX3P16989 372 aaKnown RBP eCLIP26.01■■□□□ 1.75
ARFGAP1-208ENST00000518691 ARHGEF1Q92888 912 aaKnown RBP26.01■■□□□ 1.75
ARFGAP1-208ENST00000518691 ZNF784Q8NCA9 323 aaPredicted RBP26■■□□□ 1.75
ARFGAP1-208ENST00000518691 CNGB1Q14028 1251 aaPredicted RBP25.99■■□□□ 1.75
ARFGAP1-208ENST00000518691 C4AP0C0L4 1744 aa25.98■■□□□ 1.75
ARFGAP1-208ENST00000518691 GRIN3BO60391 1043 aa25.98■■□□□ 1.75
ARFGAP1-208ENST00000518691 CRKLP46109 303 aaKnown RBP25.98■■□□□ 1.75
ARFGAP1-208ENST00000518691 NLGN1Q8N2Q7 840 aa25.98■■□□□ 1.75
ARFGAP1-208ENST00000518691 U2SURPO15042 1029 aaKnown RBP25.97■■□□□ 1.75
ARFGAP1-208ENST00000518691 PELP1Q8IZL8 1130 aaKnown RBP25.97■■□□□ 1.75
ARFGAP1-208ENST00000518691 KIF13BQ9NQT8 1826 aa25.96■■□□□ 1.75
ARFGAP1-208ENST00000518691 MMP10P09238 476 aa25.96■■□□□ 1.75
ARFGAP1-208ENST00000518691 GYS1P13807 737 aa25.96■■□□□ 1.75
ARFGAP1-208ENST00000518691 KCPQ6ZWJ8 1503 aa25.96■■□□□ 1.75
ARFGAP1-208ENST00000518691 INTS5Q6P9B9 1019 aaKnown RBP25.95■■□□□ 1.74
ARFGAP1-208ENST00000518691 PPP2R1AP30153 589 aa25.94■■□□□ 1.74
ARFGAP1-208ENST00000518691 RFC4P35249 363 aa25.94■■□□□ 1.74
ARFGAP1-208ENST00000518691 UBR2Q8IWV8 1755 aa25.94■■□□□ 1.74
ARFGAP1-208ENST00000518691 SLC39A6Q13433 755 aa25.93■■□□□ 1.74
ARFGAP1-208ENST00000518691 GAS2L2Q8NHY3 880 aa25.93■■□□□ 1.74
ARFGAP1-208ENST00000518691 CFAP53Q96M91 514 aa25.93■■□□□ 1.74
ARFGAP1-208ENST00000518691 DNAJC10Q8IXB1 793 aa25.92■■□□□ 1.74
ARFGAP1-208ENST00000518691 VSIG10Q8N0Z9 540 aa25.91■■□□□ 1.74
ARFGAP1-208ENST00000518691 IL17REQ8NFR9 667 aa25.91■■□□□ 1.74
ARFGAP1-208ENST00000518691 RSPH6AQ9H0K4 717 aa25.91■■□□□ 1.74
ARFGAP1-208ENST00000518691 KIAA1551Q9HCM1 1747 aa25.91■■□□□ 1.74
ARFGAP1-208ENST00000518691 SIPA1L3O60292 1781 aaPredicted RBP25.9■■□□□ 1.74
ARFGAP1-208ENST00000518691 GNAT3A8MTJ3 354 aa25.9■■□□□ 1.74
ARFGAP1-208ENST00000518691 CYP19A1P11511 503 aaPredicted RBP25.9■■□□□ 1.74
ARFGAP1-208ENST00000518691 PHACTR3Q96KR7 559 aa25.89■■□□□ 1.74
ARFGAP1-208ENST00000518691 CCDC87Q9NVE4 849 aa25.89■■□□□ 1.74
ARFGAP1-208ENST00000518691 USP42Q9H9J4 1324 aaKnown RBP25.88■■□□□ 1.73
ARFGAP1-208ENST00000518691 NUDCQ9Y266 331 aa25.88■■□□□ 1.73
ARFGAP1-208ENST00000518691 C10orf71Q711Q0 1435 aa25.88■■□□□ 1.73
ARFGAP1-208ENST00000518691 CEMIPQ8WUJ3 1361 aa25.87■■□□□ 1.73
ARFGAP1-208ENST00000518691 PRKAR2BP31323 418 aa25.87■■□□□ 1.73
ARFGAP1-208ENST00000518691 SOS1Q07889 1333 aaPredicted RBP25.87■■□□□ 1.73
ARFGAP1-208ENST00000518691 PXDNLA1KZ92 1463 aa25.86■■□□□ 1.73
ARFGAP1-208ENST00000518691 SRP68Q9UHB9 627 aaKnown RBP25.86■■□□□ 1.73
ARFGAP1-208ENST00000518691 TGFB2P61812 414 aa25.85■■□□□ 1.73
ARFGAP1-208ENST00000518691 FKBP8Q14318 412 aa25.84■■□□□ 1.73
ARFGAP1-208ENST00000518691 FCHSD2O94868 740 aa25.83■■□□□ 1.73
ARFGAP1-208ENST00000518691 TEFQ10587 303 aa25.83■■□□□ 1.73
ARFGAP1-208ENST00000518691 PARP3Q9Y6F1 533 aa25.83■■□□□ 1.73
ARFGAP1-208ENST00000518691 ZNF790Q6PG37 636 aa25.82■■□□□ 1.72
ARFGAP1-208ENST00000518691 N4BP2Q86UW6 1770 aaPredicted RBP25.82■■□□□ 1.72
ARFGAP1-208ENST00000518691 U2AF1L5P0DN76 240 aaPredicted RBP25.81■■□□□ 1.72
ARFGAP1-208ENST00000518691 TM4SF1P30408 202 aa25.81■■□□□ 1.72
ARFGAP1-208ENST00000518691 U2AF1Q01081 240 aaKnown RBP eCLIP25.81■■□□□ 1.728e-11■■□□□ 11.7
ARFGAP1-208ENST00000518691 TTC5Q8N0Z6 440 aa25.81■■□□□ 1.72
ARFGAP1-208ENST00000518691 ZBTB1Q9Y2K1 713 aa25.81■■□□□ 1.72
ARFGAP1-208ENST00000518691 DDR1Q08345 913 aa25.8■■□□□ 1.72
ARFGAP1-208ENST00000518691 ZNF496Q96IT1 587 aaPredicted RBP25.8■■□□□ 1.72
ARFGAP1-208ENST00000518691 BRCA1P38398 1863 aaKnown RBP25.79■■□□□ 1.72
ARFGAP1-208ENST00000518691 NARFQ9UHQ1 456 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms