RNA–Protein interactions for RNA: ENST00000518574.1

SMIM19-207, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-207ENST00000518574 ATP6V1AP38606 617 aa25.54■■□□□ 1.68
SMIM19-207ENST00000518574 ZNF530Q6P9A1 599 aaPredicted RBP25.54■■□□□ 1.68
SMIM19-207ENST00000518574 AMIGO3Q86WK7 504 aa25.54■■□□□ 1.68
SMIM19-207ENST00000518574 AEBP1Q8IUX7 1158 aa25.54■■□□□ 1.68
SMIM19-207ENST00000518574 KDRP35968 1356 aa25.54■■□□□ 1.68
SMIM19-207ENST00000518574 ITPK1Q13572 414 aa25.53■■□□□ 1.68
SMIM19-207ENST00000518574 KDM6AO15550 1401 aaPredicted RBP25.53■■□□□ 1.68
SMIM19-207ENST00000518574 PHF14O94880 888 aa25.52■■□□□ 1.68
SMIM19-207ENST00000518574 IL13P35225 146 aa25.52■■□□□ 1.68
SMIM19-207ENST00000518574 SULT6B1Q6IMI4 303 aa25.51■■□□□ 1.67
SMIM19-207ENST00000518574 ZNF784Q8NCA9 323 aaPredicted RBP25.51■■□□□ 1.67
SMIM19-207ENST00000518574 C1orf141Q5JVX7 400 aa25.5■■□□□ 1.67
SMIM19-207ENST00000518574 PELP1Q8IZL8 1130 aaKnown RBP25.5■■□□□ 1.67
SMIM19-207ENST00000518574 CD2APQ9Y5K6 639 aa25.5■■□□□ 1.67
SMIM19-207ENST00000518574 COL5A3P25940 1745 aaPredicted RBP25.49■■□□□ 1.67
SMIM19-207ENST00000518574 SCN11AQ9UI33 1791 aa25.49■■□□□ 1.67
SMIM19-207ENST00000518574 GNPATO15228 680 aa25.48■■□□□ 1.67
SMIM19-207ENST00000518574 PER1O15534 1290 aaPredicted RBP25.48■■□□□ 1.67
SMIM19-207ENST00000518574 MTHFSP49914 203 aa25.48■■□□□ 1.67
SMIM19-207ENST00000518574 CABP4P57796 275 aa25.48■■□□□ 1.67
SMIM19-207ENST00000518574 SMIM5Q71RC9 77 aa25.47■■□□□ 1.67
SMIM19-207ENST00000518574 SLC4A9Q96Q91 983 aa25.45■■□□□ 1.66
SMIM19-207ENST00000518574 RBM42Q9BTD8 480 aaKnown RBP25.45■■□□□ 1.66
SMIM19-207ENST00000518574 GRIN3BO60391 1043 aa25.44■■□□□ 1.66
SMIM19-207ENST00000518574 VIRMAQ69YN4 1812 aaKnown RBP25.43■■□□□ 1.66
SMIM19-207ENST00000518574 YBX3P16989 372 aaKnown RBP eCLIP25.43■■□□□ 1.66
SMIM19-207ENST00000518574 RC3H1Q5TC82 1133 aaKnown RBP25.43■■□□□ 1.66
SMIM19-207ENST00000518574 MYH14Q7Z406 1995 aaKnown RBP25.42■■□□□ 1.66
SMIM19-207ENST00000518574 RTCBQ9Y3I0 505 aaKnown RBP25.42■■□□□ 1.66
SMIM19-207ENST00000518574 NPC1L1Q9UHC9 1359 aa25.42■■□□□ 1.66
SMIM19-207ENST00000518574 CNTNAP4Q9C0A0 1308 aa25.41■■□□□ 1.66
SMIM19-207ENST00000518574 CC2D1BQ5T0F9 858 aaKnown RBP25.41■■□□□ 1.66
SMIM19-207ENST00000518574 NFATC2IPQ8NCF5 419 aa25.41■■□□□ 1.66
SMIM19-207ENST00000518574 CICQ96RK0 1608 aaPredicted RBP25.41■■□□□ 1.66
SMIM19-207ENST00000518574 AKAP4Q5JQC9 854 aa25.4■■□□□ 1.66
SMIM19-207ENST00000518574 TRAPPC3LQ5T215 181 aa25.4■■□□□ 1.66
SMIM19-207ENST00000518574 ADRA2BP18089 450 aa25.39■■□□□ 1.66
SMIM19-207ENST00000518574 DIAPH1O60610 1272 aaKnown RBP25.38■■□□□ 1.65
SMIM19-207ENST00000518574 KIF13BQ9NQT8 1826 aa25.37■■□□□ 1.65
SMIM19-207ENST00000518574 C4AP0C0L4 1744 aa25.37■■□□□ 1.65
SMIM19-207ENST00000518574 TJP1Q07157 1748 aa25.37■■□□□ 1.65
SMIM19-207ENST00000518574 PTCD1O75127 700 aaKnown RBP25.36■■□□□ 1.65
SMIM19-207ENST00000518574 RPS6KA4O75676 772 aa25.36■■□□□ 1.65
SMIM19-207ENST00000518574 HMOX1P09601 288 aa25.36■■□□□ 1.65
SMIM19-207ENST00000518574 MRC1P22897 1456 aa25.35■■□□□ 1.65
SMIM19-207ENST00000518574 NLGN1Q8N2Q7 840 aa25.35■■□□□ 1.65
SMIM19-207ENST00000518574 ADAMTS7Q9UKP4 1686 aa25.34■■□□□ 1.65
SMIM19-207ENST00000518574 MMP10P09238 476 aa25.34■■□□□ 1.65
SMIM19-207ENST00000518574 ARHGEF1Q92888 912 aaKnown RBP25.34■■□□□ 1.65
SMIM19-207ENST00000518574 SLC52A2Q9HAB3 445 aa25.33■■□□□ 1.65
SMIM19-207ENST00000518574 COL3A1P02461 1466 aaPredicted RBP25.33■■□□□ 1.65
SMIM19-207ENST00000518574 RFC4P35249 363 aa25.32■■□□□ 1.64
SMIM19-207ENST00000518574 LGR6Q9HBX8 967 aa25.31■■□□□ 1.64
SMIM19-207ENST00000518574 RNMTO43148 476 aaKnown RBP25.3■■□□□ 1.64
SMIM19-207ENST00000518574 CRKLP46109 303 aaKnown RBP25.3■■□□□ 1.64
SMIM19-207ENST00000518574 GYS1P13807 737 aa25.29■■□□□ 1.64
SMIM19-207ENST00000518574 MTHFSDQ2M296 383 aaKnown RBP25.29■■□□□ 1.64
SMIM19-207ENST00000518574 KIAA1551Q9HCM1 1747 aa25.29■■□□□ 1.64
SMIM19-207ENST00000518574 CNGB1Q14028 1251 aaPredicted RBP25.26■■□□□ 1.63
SMIM19-207ENST00000518574 C10orf71Q711Q0 1435 aa25.26■■□□□ 1.63
SMIM19-207ENST00000518574 N4BP2Q86UW6 1770 aaPredicted RBP25.26■■□□□ 1.63
SMIM19-207ENST00000518574 PXDNLA1KZ92 1463 aa25.25■■□□□ 1.63
SMIM19-207ENST00000518574 UBR2Q8IWV8 1755 aa25.25■■□□□ 1.63
SMIM19-207ENST00000518574 KCPQ6ZWJ8 1503 aa25.24■■□□□ 1.63
SMIM19-207ENST00000518574 U2SURPO15042 1029 aaKnown RBP25.24■■□□□ 1.63
SMIM19-207ENST00000518574 C1QTNF8P60827 252 aa25.24■■□□□ 1.63
SMIM19-207ENST00000518574 TGFB2P61812 414 aa25.24■■□□□ 1.63
SMIM19-207ENST00000518574 INTS5Q6P9B9 1019 aaKnown RBP25.24■■□□□ 1.63
SMIM19-207ENST00000518574 CCDC87Q9NVE4 849 aa25.24■■□□□ 1.63
SMIM19-207ENST00000518574 USP42Q9H9J4 1324 aaKnown RBP25.23■■□□□ 1.63
SMIM19-207ENST00000518574 GIGYF1O75420 1035 aaPredicted RBP25.23■■□□□ 1.63
SMIM19-207ENST00000518574 DNAJC10Q8IXB1 793 aa25.23■■□□□ 1.63
SMIM19-207ENST00000518574 WWC3Q9ULE0 1092 aa25.23■■□□□ 1.63
SMIM19-207ENST00000518574 PARP3Q9Y6F1 533 aa25.23■■□□□ 1.63
SMIM19-207ENST00000518574 SLC39A6Q13433 755 aa25.22■■□□□ 1.63
SMIM19-207ENST00000518574 BRCA1P38398 1863 aaKnown RBP25.21■■□□□ 1.63
SMIM19-207ENST00000518574 GAS2L2Q8NHY3 880 aa25.21■■□□□ 1.63
SMIM19-207ENST00000518574 ATP10DQ9P241 1426 aa25.2■■□□□ 1.63
SMIM19-207ENST00000518574 ADCY9O60503 1353 aa25.2■■□□□ 1.63
SMIM19-207ENST00000518574 VSIG10Q8N0Z9 540 aa25.2■■□□□ 1.62
SMIM19-207ENST00000518574 CFAP53Q96M91 514 aa25.2■■□□□ 1.62
SMIM19-207ENST00000518574 SRP68Q9UHB9 627 aaKnown RBP25.2■■□□□ 1.62
SMIM19-207ENST00000518574 SIPA1L3O60292 1781 aaPredicted RBP25.2■■□□□ 1.62
SMIM19-207ENST00000518574 CYP19A1P11511 503 aaPredicted RBP25.19■■□□□ 1.62
SMIM19-207ENST00000518574 SOS1Q07889 1333 aaPredicted RBP25.18■■□□□ 1.62
SMIM19-207ENST00000518574 GNAT3A8MTJ3 354 aa25.18■■□□□ 1.62
SMIM19-207ENST00000518574 FKBP8Q14318 412 aa25.18■■□□□ 1.62
SMIM19-207ENST00000518574 A0A0G2JLW4 131 aa25.17■■□□□ 1.62
SMIM19-207ENST00000518574 ZPR1O75312 459 aa25.16■■□□□ 1.62
SMIM19-207ENST00000518574 TEFQ10587 303 aa25.15■■□□□ 1.62
SMIM19-207ENST00000518574 TTC5Q8N0Z6 440 aa25.15■■□□□ 1.62
SMIM19-207ENST00000518574 ARFGEF1Q9Y6D6 1849 aa25.14■■□□□ 1.62
SMIM19-207ENST00000518574 DPEP1P16444 411 aa25.14■■□□□ 1.62
SMIM19-207ENST00000518574 DDR1Q08345 913 aa25.14■■□□□ 1.62
SMIM19-207ENST00000518574 IL17REQ8NFR9 667 aa25.14■■□□□ 1.62
SMIM19-207ENST00000518574 BCS1LQ9Y276 419 aa25.14■■□□□ 1.62
SMIM19-207ENST00000518574 COL15A1P39059 1388 aa25.14■■□□□ 1.61
SMIM19-207ENST00000518574 NUDCQ9Y266 331 aa25.13■■□□□ 1.61
SMIM19-207ENST00000518574 ZBTB1Q9Y2K1 713 aa25.13■■□□□ 1.61
SMIM19-207ENST00000518574 PPP2R1AP30153 589 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms