RNA–Protein interactions for RNA: ENST00000518447.1

SCUBE2-203, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 462 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-203ENST00000518447 SLC12A5Q9H2X9 1139 aa8.57□□□□□ -1.04
SCUBE2-203ENST00000518447 MEGF6O75095 1541 aa8.57□□□□□ -1.04
SCUBE2-203ENST00000518447 USP31Q70CQ4 1352 aa8.56□□□□□ -1.04
SCUBE2-203ENST00000518447 EDC4Q6P2E9 1401 aaKnown RBP8.55□□□□□ -1.04
SCUBE2-203ENST00000518447 TAF1LQ8IZX4 1826 aa8.55□□□□□ -1.04
SCUBE2-203ENST00000518447 ZNF784Q8NCA9 323 aaPredicted RBP8.55□□□□□ -1.04
SCUBE2-203ENST00000518447 SYT17Q9BSW7 474 aa8.55□□□□□ -1.04
SCUBE2-203ENST00000518447 NSD2O96028 1365 aa8.55□□□□□ -1.04
SCUBE2-203ENST00000518447 IL2RBP14784 551 aa8.54□□□□□ -1.04
SCUBE2-203ENST00000518447 USHBP1Q8N6Y0 703 aa8.54□□□□□ -1.04
SCUBE2-203ENST00000518447 DDX54Q8TDD1 881 aaKnown RBP8.54□□□□□ -1.04
SCUBE2-203ENST00000518447 CDCA7Q9BWT1 371 aaPredicted RBP8.54□□□□□ -1.04
SCUBE2-203ENST00000518447 CARD11Q9BXL7 1154 aa8.54□□□□□ -1.04
SCUBE2-203ENST00000518447 MTFR1LQ9H019 292 aa8.54□□□□□ -1.04
SCUBE2-203ENST00000518447 ITGB4P16144 1822 aa8.54□□□□□ -1.04
SCUBE2-203ENST00000518447 PDCD7Q8N8D1 485 aaKnown RBP8.53□□□□□ -1.04
SCUBE2-203ENST00000518447 NLGN2Q8NFZ4 835 aa8.53□□□□□ -1.04
SCUBE2-203ENST00000518447 SYTL4Q96C24 671 aaPredicted RBP8.53□□□□□ -1.04
SCUBE2-203ENST00000518447 PNPLA7Q6ZV29 1317 aa8.53□□□□□ -1.04
SCUBE2-203ENST00000518447 C11orf95C9JLR9 678 aaPredicted RBP8.52□□□□□ -1.05
SCUBE2-203ENST00000518447 ARXQ96QS3 562 aa8.52□□□□□ -1.05
SCUBE2-203ENST00000518447 MAP3K19Q56UN5 1328 aa8.52□□□□□ -1.05
SCUBE2-203ENST00000518447 RRS1Q15050 365 aaKnown RBP8.51□□□□□ -1.05
SCUBE2-203ENST00000518447 MSL1Q68DK7 614 aa8.51□□□□□ -1.05
SCUBE2-203ENST00000518447 SMIM5Q71RC9 77 aa8.51□□□□□ -1.05
SCUBE2-203ENST00000518447 HDGFL2Q7Z4V5 671 aaPredicted RBP8.51□□□□□ -1.05
SCUBE2-203ENST00000518447 MIER1Q8N108 512 aa8.51□□□□□ -1.05
SCUBE2-203ENST00000518447 L3MBTL3Q96JM7 780 aaPredicted RBP8.51□□□□□ -1.05
SCUBE2-203ENST00000518447 PKD1L3Q7Z443 1732 aa8.51□□□□□ -1.05
SCUBE2-203ENST00000518447 HOXB1P14653 301 aaPredicted RBP8.5□□□□□ -1.05
SCUBE2-203ENST00000518447 PRIM1P49642 420 aaKnown RBP8.5□□□□□ -1.05
SCUBE2-203ENST00000518447 WWC3Q9ULE0 1092 aa8.5□□□□□ -1.05
SCUBE2-203ENST00000518447 ANKRD26Q9UPS8 1709 aa8.5□□□□□ -1.05
SCUBE2-203ENST00000518447 ANKRD36BQ8N2N9 1353 aa8.49□□□□□ -1.05
SCUBE2-203ENST00000518447 TONSLQ96HA7 1378 aa8.49□□□□□ -1.05
SCUBE2-203ENST00000518447 UBR3Q6ZT12 1888 aa8.49□□□□□ -1.05
SCUBE2-203ENST00000518447 C4BP0C0L5 1744 aa8.49□□□□□ -1.05
SCUBE2-203ENST00000518447 SENP3-EIF4A1A0A087X0R7 540 aa8.49□□□□□ -1.05
SCUBE2-203ENST00000518447 HOXC9P31274 260 aa8.49□□□□□ -1.05
SCUBE2-203ENST00000518447 TESK2Q96S53 571 aa8.49□□□□□ -1.05
SCUBE2-203ENST00000518447 ST20-MTHFSA0A0A6YYL1 179 aa8.48□□□□□ -1.05
SCUBE2-203ENST00000518447 HOXB3P14651 431 aaPredicted RBP8.48□□□□□ -1.05
SCUBE2-203ENST00000518447 YBX3P16989 372 aaKnown RBP eCLIP8.48□□□□□ -1.05
SCUBE2-203ENST00000518447 GPR162Q16538 588 aa8.48□□□□□ -1.05
SCUBE2-203ENST00000518447 AMIGO3Q86WK7 504 aa8.48□□□□□ -1.05
SCUBE2-203ENST00000518447 IP6K1Q92551 441 aa8.48□□□□□ -1.05
SCUBE2-203ENST00000518447 GGNBP2Q9H3C7 697 aa8.48□□□□□ -1.05
SCUBE2-203ENST00000518447 TFCP2L1Q9NZI6 479 aa8.48□□□□□ -1.05
SCUBE2-203ENST00000518447 MAP3K5Q99683 1374 aa8.48□□□□□ -1.05
SCUBE2-203ENST00000518447 MAP2P11137 1827 aaKnown RBP8.47□□□□□ -1.05
SCUBE2-203ENST00000518447 NBPF6Q5VWK0 638 aa8.47□□□□□ -1.05
SCUBE2-203ENST00000518447 NBPF4Q96M43 638 aa8.47□□□□□ -1.05
SCUBE2-203ENST00000518447 TERF2IPQ9NYB0 399 aa8.47□□□□□ -1.05
SCUBE2-203ENST00000518447 KIAA1551Q9HCM1 1747 aa8.46□□□□□ -1.05
SCUBE2-203ENST00000518447 AMPHP49418 695 aa8.46□□□□□ -1.06
SCUBE2-203ENST00000518447 COL23A1Q86Y22 540 aaPredicted RBP8.46□□□□□ -1.06
SCUBE2-203ENST00000518447 COG3Q96JB2 828 aa8.46□□□□□ -1.06
SCUBE2-203ENST00000518447 CCNL1Q9UK58 526 aaPredicted RBP8.46□□□□□ -1.06
SCUBE2-203ENST00000518447 N4BP2Q86UW6 1770 aaPredicted RBP8.45□□□□□ -1.06
SCUBE2-203ENST00000518447 NUBP1P53384 320 aa8.45□□□□□ -1.06
SCUBE2-203ENST00000518447 C1QTNF8P60827 252 aa8.45□□□□□ -1.06
SCUBE2-203ENST00000518447 HSP90AB2PQ58FF8 381 aa8.45□□□□□ -1.06
SCUBE2-203ENST00000518447 VARS2Q5ST30 1063 aaKnown RBP8.45□□□□□ -1.06
SCUBE2-203ENST00000518447 ZNF710Q8N1W2 664 aa8.45□□□□□ -1.06
SCUBE2-203ENST00000518447 ZCRB1Q8TBF4 217 aaKnown RBP8.45□□□□□ -1.06
SCUBE2-203ENST00000518447 USP47Q96K76 1375 aa8.45□□□□□ -1.06
SCUBE2-203ENST00000518447 C4AP0C0L4 1744 aa8.44□□□□□ -1.06
SCUBE2-203ENST00000518447 SLC27A3Q5K4L6 730 aa8.44□□□□□ -1.06
SCUBE2-203ENST00000518447 ZNF526Q8TF50 670 aaPredicted RBP8.44□□□□□ -1.06
SCUBE2-203ENST00000518447 PLA2G2EQ9NZK7 142 aa8.44□□□□□ -1.06
SCUBE2-203ENST00000518447 RTL1A6NKG5 1358 aa8.44□□□□□ -1.06
SCUBE2-203ENST00000518447 PALLDQ8WX93 1383 aa8.44□□□□□ -1.06
SCUBE2-203ENST00000518447 FYB1O15117 783 aa8.43□□□□□ -1.06
SCUBE2-203ENST00000518447 PHF14O94880 888 aa8.43□□□□□ -1.06
SCUBE2-203ENST00000518447 POLD1P28340 1107 aa8.43□□□□□ -1.06
SCUBE2-203ENST00000518447 EMILIN1Q9Y6C2 1016 aa8.43□□□□□ -1.06
SCUBE2-203ENST00000518447 SMG6Q86US8 1419 aaKnown RBP8.43□□□□□ -1.06
SCUBE2-203ENST00000518447 NSD3Q9BZ95 1437 aa8.43□□□□□ -1.06
SCUBE2-203ENST00000518447 ATP10DQ9P241 1426 aa8.43□□□□□ -1.06
SCUBE2-203ENST00000518447 COL5A3P25940 1745 aaPredicted RBP8.43□□□□□ -1.06
SCUBE2-203ENST00000518447 CYP27B1O15528 508 aa8.42□□□□□ -1.06
SCUBE2-203ENST00000518447 GIGYF1O75420 1035 aaPredicted RBP8.42□□□□□ -1.06
SCUBE2-203ENST00000518447 MPRIPQ6WCQ1 1025 aa8.42□□□□□ -1.06
SCUBE2-203ENST00000518447 CICQ96RK0 1608 aaPredicted RBP8.41□□□□□ -1.06
SCUBE2-203ENST00000518447 INSRP06213 1382 aa8.41□□□□□ -1.06
SCUBE2-203ENST00000518447 CARD14Q9BXL6 1004 aa8.41□□□□□ -1.06
SCUBE2-203ENST00000518447 VIRMAQ69YN4 1812 aaKnown RBP8.4□□□□□ -1.06
SCUBE2-203ENST00000518447 KIF13BQ9NQT8 1826 aa8.4□□□□□ -1.06
SCUBE2-203ENST00000518447 FLT4P35916 1363 aa8.4□□□□□ -1.06
SCUBE2-203ENST00000518447 PCDH11XQ9BZA7 1347 aa8.4□□□□□ -1.06
SCUBE2-203ENST00000518447 PCDH11YQ9BZA8 1340 aa8.4□□□□□ -1.06
SCUBE2-203ENST00000518447 PPM1GO15355 546 aaPredicted RBP8.4□□□□□ -1.06
SCUBE2-203ENST00000518447 TATP17735 454 aaPredicted RBP8.4□□□□□ -1.06
SCUBE2-203ENST00000518447 SLC16A10Q8TF71 515 aa8.4□□□□□ -1.06
SCUBE2-203ENST00000518447 RAPGEF4Q8WZA2 1011 aa8.4□□□□□ -1.06
SCUBE2-203ENST00000518447 FAM212AQ96EL1 285 aa8.4□□□□□ -1.06
SCUBE2-203ENST00000518447 BRCA1P38398 1863 aaKnown RBP8.4□□□□□ -1.07
SCUBE2-203ENST00000518447 NCAPD2Q15021 1401 aa8.39□□□□□ -1.07
SCUBE2-203ENST00000518447 ZNF687Q8N1G0 1237 aa8.39□□□□□ -1.07
SCUBE2-203ENST00000518447 LINC00116Q8NCU8 138 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms