RNA–Protein interactions for RNA: ENST00000518018.1

TRPS1-207, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-207ENST00000518018 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.67□□□□□ -1.18
TRPS1-207ENST00000518018 SERTAD1Q9UHV2 236 aa7.67□□□□□ -1.18
TRPS1-207ENST00000518018 WASLO00401 505 aaPredicted RBP7.66□□□□□ -1.18
TRPS1-207ENST00000518018 GPC1P35052 558 aa7.66□□□□□ -1.18
TRPS1-207ENST00000518018 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.66□□□□□ -1.18
TRPS1-207ENST00000518018 SLC27A3Q5K4L6 730 aa7.66□□□□□ -1.18
TRPS1-207ENST00000518018 PRICKLE2Q7Z3G6 844 aa7.66□□□□□ -1.18
TRPS1-207ENST00000518018 LARGE2Q8N3Y3 721 aa7.66□□□□□ -1.18
TRPS1-207ENST00000518018 DKK1O94907 266 aa7.65□□□□□ -1.18
TRPS1-207ENST00000518018 SRPK2P78362 688 aaKnown RBP7.65□□□□□ -1.18
TRPS1-207ENST00000518018 PTK7Q13308 1070 aa7.65□□□□□ -1.18
TRPS1-207ENST00000518018 TLR1Q15399 786 aa7.65□□□□□ -1.18
TRPS1-207ENST00000518018 LARP1Q6PKG0 1096 aaKnown RBP7.65□□□□□ -1.18
TRPS1-207ENST00000518018 LYSMD3Q7Z3D4 306 aa7.65□□□□□ -1.18
TRPS1-207ENST00000518018 SIX5Q8N196 739 aa7.65□□□□□ -1.18
TRPS1-207ENST00000518018 FHDC1Q9C0D6 1143 aaPredicted RBP7.65□□□□□ -1.18
TRPS1-207ENST00000518018 GRIP2Q9C0E4 1043 aa7.65□□□□□ -1.18
TRPS1-207ENST00000518018 ZNF358Q9NW07 568 aa7.65□□□□□ -1.18
TRPS1-207ENST00000518018 FAM196BA6NMK8 535 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 USP17L15C9J2P7 530 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 USP17L10C9JJH3 530 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 USP17L13C9JLJ4 530 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 USP17L12C9JPN9 530 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 USP17L11C9JVI0 530 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 USP17L21D6R901 530 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 USP17L18D6R9N7 530 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 USP17L22D6RA61 530 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 USP17L17D6RBQ6 530 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 USP17L19D6RCP7 530 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 USP17L20D6RJB6 530 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 USP17L24Q0WX57 530 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 ARID3AQ99856 593 aa7.64□□□□□ -1.19
TRPS1-207ENST00000518018 RHOQP17081 205 aa7.63□□□□□ -1.19
TRPS1-207ENST00000518018 SMTNP53814 917 aa7.63□□□□□ -1.19
TRPS1-207ENST00000518018 POU4F2Q12837 409 aa7.63□□□□□ -1.19
TRPS1-207ENST00000518018 SLC4A9Q96Q91 983 aa7.63□□□□□ -1.19
TRPS1-207ENST00000518018 ZSCAN10Q96SZ4 725 aaPredicted RBP7.63□□□□□ -1.19
TRPS1-207ENST00000518018 SFI1A8K8P3 1242 aa7.62□□□□□ -1.19
TRPS1-207ENST00000518018 BACH1O14867 736 aa7.62□□□□□ -1.19
TRPS1-207ENST00000518018 PTSQ03393 145 aa7.62□□□□□ -1.19
TRPS1-207ENST00000518018 DPYDQ12882 1025 aa7.62□□□□□ -1.19
TRPS1-207ENST00000518018 TNS4Q8IZW8 715 aa7.62□□□□□ -1.19
TRPS1-207ENST00000518018 PBXIP1Q96AQ6 731 aa7.62□□□□□ -1.19
TRPS1-207ENST00000518018 RBM19Q9Y4C8 960 aaKnown RBP7.62□□□□□ -1.19
TRPS1-207ENST00000518018 A6NJY4 79 aa7.61□□□□□ -1.19
TRPS1-207ENST00000518018 TMEM214Q6NUQ4 689 aaKnown RBP7.61□□□□□ -1.19
TRPS1-207ENST00000518018 ANKMY2Q8IV38 441 aa7.61□□□□□ -1.19
TRPS1-207ENST00000518018 TSEN2Q8NCE0 465 aaKnown RBP7.61□□□□□ -1.19
TRPS1-207ENST00000518018 USP3Q9Y6I4 520 aa7.61□□□□□ -1.19
TRPS1-207ENST00000518018 SENP3-EIF4A1A0A087X0R7 540 aa7.6□□□□□ -1.19
TRPS1-207ENST00000518018 SPATA31C2B4DYI2 1134 aa7.6□□□□□ -1.19
TRPS1-207ENST00000518018 EPHA4P54764 986 aa7.6□□□□□ -1.19
TRPS1-207ENST00000518018 SEC13P55735 322 aa7.6□□□□□ -1.19
TRPS1-207ENST00000518018 MTFR1Q15390 333 aa7.6□□□□□ -1.19
TRPS1-207ENST00000518018 NBPF10Q6P3W6 841 aaKnown RBP7.6□□□□□ -1.19
TRPS1-207ENST00000518018 PPARGC1BQ86YN6 1023 aaKnown RBP7.6□□□□□ -1.19
TRPS1-207ENST00000518018 NBPF15Q8N660 670 aa7.6□□□□□ -1.19
TRPS1-207ENST00000518018 SCHIP1Q9P0W5 487 aaPredicted RBP7.6□□□□□ -1.19
TRPS1-207ENST00000518018 NOVA2Q9UNW9 492 aaKnown RBP7.6□□□□□ -1.19
TRPS1-207ENST00000518018 IQSEC3Q9UPP2 1182 aaPredicted RBP7.6□□□□□ -1.19
TRPS1-207ENST00000518018 GTF2E1P29083 439 aaPredicted RBP7.59□□□□□ -1.19
TRPS1-207ENST00000518018 PHKA2P46019 1235 aa7.59□□□□□ -1.19
TRPS1-207ENST00000518018 VEGFBP49765 207 aa7.59□□□□□ -1.19
TRPS1-207ENST00000518018 C4orf17Q53FE4 359 aa7.59□□□□□ -1.19
TRPS1-207ENST00000518018 GNASQ5JWF2 1037 aa7.59□□□□□ -1.19
TRPS1-207ENST00000518018 TAS1R3Q7RTX0 852 aa7.59□□□□□ -1.19
TRPS1-207ENST00000518018 RHBDD1Q8TEB9 315 aa7.59□□□□□ -1.19
TRPS1-207ENST00000518018 ZNF775Q96BV0 537 aaPredicted RBP7.59□□□□□ -1.19
TRPS1-207ENST00000518018 NXF1Q9UBU9 619 aaKnown RBP7.59□□□□□ -1.19
TRPS1-207ENST00000518018 ZMIZ1Q9ULJ6 1067 aa7.59□□□□□ -1.19
TRPS1-207ENST00000518018 SLC35F4A4IF30 521 aa7.58□□□□□ -1.2
TRPS1-207ENST00000518018 M0R2N6 131 aa7.58□□□□□ -1.2
TRPS1-207ENST00000518018 CDK2AP1O14519 115 aa7.58□□□□□ -1.2
TRPS1-207ENST00000518018 LGR5O75473 907 aa7.58□□□□□ -1.2
TRPS1-207ENST00000518018 ATG7O95352 703 aa7.58□□□□□ -1.2
TRPS1-207ENST00000518018 FOXK2Q01167 660 aa7.58□□□□□ -1.2
TRPS1-207ENST00000518018 TBCELQ5QJ74 424 aa7.58□□□□□ -1.2
TRPS1-207ENST00000518018 ZNF295-AS1Q8N0V1 137 aa7.58□□□□□ -1.2
TRPS1-207ENST00000518018 CCDC155Q8N6L0 562 aa7.58□□□□□ -1.2
TRPS1-207ENST00000518018 WDR44Q5JSH3 913 aa7.57□□□□□ -1.2
TRPS1-207ENST00000518018 SLC9A9Q8IVB4 645 aa7.57□□□□□ -1.2
TRPS1-207ENST00000518018 FAM200AQ8TCP9 573 aa7.57□□□□□ -1.2
TRPS1-207ENST00000518018 STK32AQ8WU08 396 aa7.57□□□□□ -1.2
TRPS1-207ENST00000518018 TERTO14746 1132 aaKnown RBP7.56□□□□□ -1.2
TRPS1-207ENST00000518018 PPFIA3O75145 1194 aa7.56□□□□□ -1.2
TRPS1-207ENST00000518018 ELOAQ14241 798 aaKnown RBP7.56□□□□□ -1.2
TRPS1-207ENST00000518018 HINFPQ9BQA5 517 aa7.56□□□□□ -1.2
TRPS1-207ENST00000518018 NIFKQ9BYG3 293 aaKnown RBP7.56□□□□□ -1.2
TRPS1-207ENST00000518018 TSPAN10Q9H1Z9 355 aaPredicted RBP7.56□□□□□ -1.2
TRPS1-207ENST00000518018 TIMMDC1Q9NPL8 285 aa7.56□□□□□ -1.2
TRPS1-207ENST00000518018 PLA2G4AP47712 749 aa7.55□□□□□ -1.2
TRPS1-207ENST00000518018 CABP1Q9NZU7 370 aa7.55□□□□□ -1.2
TRPS1-207ENST00000518018 DYRK1BQ9Y463 629 aa7.55□□□□□ -1.2
TRPS1-207ENST00000518018 PARP3Q9Y6F1 533 aa7.55□□□□□ -1.2
TRPS1-207ENST00000518018 H3BM21 787 aa7.54□□□□□ -1.2
TRPS1-207ENST00000518018 C21orf2O43822 256 aa7.54□□□□□ -1.2
TRPS1-207ENST00000518018 PPP1R15AO75807 674 aaPredicted RBP7.54□□□□□ -1.2
TRPS1-207ENST00000518018 NFX1Q12986 1120 aaKnown RBP7.54□□□□□ -1.2
TRPS1-207ENST00000518018 TMEM164Q5U3C3 297 aa7.54□□□□□ -1.2
TRPS1-207ENST00000518018 GAS2L1Q99501 681 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms