RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 ATP6V1AP38606 617 aa15.85■□□□□ 0.13
CTNNA1-205ENST00000517904 PPM1GO15355 546 aaPredicted RBP15.84■□□□□ 0.13
CTNNA1-205ENST00000517904 EYA1Q99502 592 aa15.84■□□□□ 0.13
CTNNA1-205ENST00000517904 ATG3Q9NT62 314 aa15.84■□□□□ 0.13
CTNNA1-205ENST00000517904 PHKG2P15735 406 aa15.83■□□□□ 0.12
CTNNA1-205ENST00000517904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.83■□□□□ 0.121e-8■■□□□ 12
CTNNA1-205ENST00000517904 WASHC2AQ641Q2 1341 aa15.83■□□□□ 0.12
CTNNA1-205ENST00000517904 KDRP35968 1356 aa15.83■□□□□ 0.12
CTNNA1-205ENST00000517904 C10orf71Q711Q0 1435 aa15.83■□□□□ 0.12
CTNNA1-205ENST00000517904 SLC4A9Q96Q91 983 aa15.82■□□□□ 0.12
CTNNA1-205ENST00000517904 A0A0G2JLW4 131 aa15.81■□□□□ 0.12
CTNNA1-205ENST00000517904 BRCA1P38398 1863 aaKnown RBP15.81■□□□□ 0.12
CTNNA1-205ENST00000517904 APLP1P51693 650 aa15.81■□□□□ 0.12
CTNNA1-205ENST00000517904 IFNL2Q8IZJ0 200 aa15.81■□□□□ 0.12
CTNNA1-205ENST00000517904 BCS1LQ9Y276 419 aa15.81■□□□□ 0.12
CTNNA1-205ENST00000517904 COL5A3P25940 1745 aaPredicted RBP15.8■□□□□ 0.12
CTNNA1-205ENST00000517904 TOMM70O94826 608 aa15.8■□□□□ 0.12
CTNNA1-205ENST00000517904 TGFB2P61812 414 aa15.8■□□□□ 0.12
CTNNA1-205ENST00000517904 CDCA8Q53HL2 280 aa15.8■□□□□ 0.12
CTNNA1-205ENST00000517904 DNAJC5GQ8N7S2 189 aa15.8■□□□□ 0.12
CTNNA1-205ENST00000517904 C4AP0C0L4 1744 aa15.8■□□□□ 0.12
CTNNA1-205ENST00000517904 ZNF831Q5JPB2 1677 aa15.79■□□□□ 0.12
CTNNA1-205ENST00000517904 TRAPPC3LQ5T215 181 aa15.79■□□□□ 0.12
CTNNA1-205ENST00000517904 NMRK2Q9NPI5 230 aa15.79■□□□□ 0.12
CTNNA1-205ENST00000517904 RTCBQ9Y3I0 505 aaKnown RBP15.79■□□□□ 0.12
CTNNA1-205ENST00000517904 DPEP1P16444 411 aa15.78■□□□□ 0.12
CTNNA1-205ENST00000517904 ARHGAP27Q6ZUM4 889 aa15.78■□□□□ 0.12
CTNNA1-205ENST00000517904 NLGN1Q8N2Q7 840 aa15.78■□□□□ 0.12
CTNNA1-205ENST00000517904 ARHGEF1Q92888 912 aaKnown RBP15.78■□□□□ 0.12
CTNNA1-205ENST00000517904 POLKQ9UBT6 870 aa15.78■□□□□ 0.12
CTNNA1-205ENST00000517904 MYH14Q7Z406 1995 aaKnown RBP15.77■□□□□ 0.12
CTNNA1-205ENST00000517904 GYS1P13807 737 aa15.77■□□□□ 0.12
CTNNA1-205ENST00000517904 WDR90Q96KV7 1748 aa15.77■□□□□ 0.11
CTNNA1-205ENST00000517904 KCNA3P22001 575 aa15.76■□□□□ 0.11
CTNNA1-205ENST00000517904 EIF4A2Q14240 407 aaKnown RBP15.76■□□□□ 0.11
CTNNA1-205ENST00000517904 RBM42Q9BTD8 480 aaKnown RBP15.76■□□□□ 0.11
CTNNA1-205ENST00000517904 ARFGEF1Q9Y6D6 1849 aa15.75■□□□□ 0.11
CTNNA1-205ENST00000517904 CNTNAP4Q9C0A0 1308 aa15.75■□□□□ 0.11
CTNNA1-205ENST00000517904 FCHSD2O94868 740 aa15.75■□□□□ 0.11
CTNNA1-205ENST00000517904 RC3H1Q5TC82 1133 aaKnown RBP15.75■□□□□ 0.11
CTNNA1-205ENST00000517904 CCDC87Q9NVE4 849 aa15.75■□□□□ 0.11
CTNNA1-205ENST00000517904 PLEKHG2Q9H7P9 1386 aa15.75■□□□□ 0.11
CTNNA1-205ENST00000517904 ERVV-2B6SEH9 535 aa15.74■□□□□ 0.11
CTNNA1-205ENST00000517904 RPS6KA4O75676 772 aa15.74■□□□□ 0.11
CTNNA1-205ENST00000517904 KDM6AO15550 1401 aaPredicted RBP15.74■□□□□ 0.11
CTNNA1-205ENST00000517904 RFC4P35249 363 aa15.73■□□□□ 0.11
CTNNA1-205ENST00000517904 HTRA3P83110 453 aa15.73■□□□□ 0.11
CTNNA1-205ENST00000517904 C9orf131Q5VYM1 1079 aa15.73■□□□□ 0.11
CTNNA1-205ENST00000517904 TNNT2P45379 298 aaPredicted RBP15.72■□□□□ 0.11
CTNNA1-205ENST00000517904 RBM46Q8TBY0 533 aaKnown RBP15.72■□□□□ 0.11
CTNNA1-205ENST00000517904 DCAF5Q96JK2 942 aa15.72■□□□□ 0.11
CTNNA1-205ENST00000517904 PARP3Q9Y6F1 533 aa15.72■□□□□ 0.11
CTNNA1-205ENST00000517904 KCPQ6ZWJ8 1503 aa15.71■□□□□ 0.11
CTNNA1-205ENST00000517904 DDR1Q08345 913 aa15.7■□□□□ 0.1
CTNNA1-205ENST00000517904 SRP68Q9UHB9 627 aaKnown RBP15.7■□□□□ 0.1
CTNNA1-205ENST00000517904 TJP1Q07157 1748 aa15.69■□□□□ 0.1
CTNNA1-205ENST00000517904 HSP90AB1P08238 724 aaKnown RBP15.69■□□□□ 0.1
CTNNA1-205ENST00000517904 FKBP8Q14318 412 aa15.69■□□□□ 0.1
CTNNA1-205ENST00000517904 PIM2Q9P1W9 311 aa15.69■□□□□ 0.1
CTNNA1-205ENST00000517904 USP42Q9H9J4 1324 aaKnown RBP15.68■□□□□ 0.1
CTNNA1-205ENST00000517904 SBF1O95248 1867 aa15.68■□□□□ 0.1
CTNNA1-205ENST00000517904 ADAMTS7Q9UKP4 1686 aa15.68■□□□□ 0.1
CTNNA1-205ENST00000517904 PTCD1O75127 700 aaKnown RBP15.68■□□□□ 0.1
CTNNA1-205ENST00000517904 CRKLP46109 303 aaKnown RBP15.68■□□□□ 0.1
CTNNA1-205ENST00000517904 CABP4P57796 275 aa15.68■□□□□ 0.1
CTNNA1-205ENST00000517904 PLEKHO1Q53GL0 409 aaPredicted RBP15.68■□□□□ 0.1
CTNNA1-205ENST00000517904 ZNF530Q6P9A1 599 aaPredicted RBP15.68■□□□□ 0.1
CTNNA1-205ENST00000517904 KLRG1Q96E93 195 aa15.68■□□□□ 0.1
CTNNA1-205ENST00000517904 CHRNA5P30532 468 aa15.67■□□□□ 0.1
CTNNA1-205ENST00000517904 DALRD3Q5D0E6 543 aaKnown RBP15.67■□□□□ 0.1
CTNNA1-205ENST00000517904 COL13A1Q5TAT6 717 aaPredicted RBP15.67■□□□□ 0.1
CTNNA1-205ENST00000517904 C16orf71Q8IYS4 520 aaPredicted RBP15.67■□□□□ 0.1
CTNNA1-205ENST00000517904 JMYQ8N9B5 988 aa15.67■□□□□ 0.1
CTNNA1-205ENST00000517904 RNF181Q9P0P0 153 aa15.67■□□□□ 0.1
CTNNA1-205ENST00000517904 TNRC6CQ9HCJ0 1690 aaKnown RBP15.67■□□□□ 0.1
CTNNA1-205ENST00000517904 FSTL1Q12841 308 aa15.66■□□□□ 0.1
CTNNA1-205ENST00000517904 AEBP1Q8IUX7 1158 aa15.66■□□□□ 0.1
CTNNA1-205ENST00000517904 NFATC2IPQ8NCF5 419 aa15.66■□□□□ 0.1
CTNNA1-205ENST00000517904 KDM2BQ8NHM5 1336 aa15.66■□□□□ 0.1
CTNNA1-205ENST00000517904 MTHFSP49914 203 aa15.65■□□□□ 0.1
CTNNA1-205ENST00000517904 AMOTQ4VCS5 1084 aa15.65■□□□□ 0.1
CTNNA1-205ENST00000517904 RRAGCQ9HB90 399 aa15.65■□□□□ 0.1
CTNNA1-205ENST00000517904 POLRMTO00411 1230 aaKnown RBP15.64■□□□□ 0.09
CTNNA1-205ENST00000517904 INTS5Q6P9B9 1019 aaKnown RBP15.64■□□□□ 0.09
CTNNA1-205ENST00000517904 TM4SF1P30408 202 aa15.63■□□□□ 0.09
CTNNA1-205ENST00000517904 POLR3GLQ9BT43 218 aa15.63■□□□□ 0.09
CTNNA1-205ENST00000517904 SCN11AQ9UI33 1791 aa15.62■□□□□ 0.09
CTNNA1-205ENST00000517904 RASSF7Q02833 373 aa15.62■□□□□ 0.09
CTNNA1-205ENST00000517904 C1orf141Q5JVX7 400 aa15.62■□□□□ 0.09
CTNNA1-205ENST00000517904 AFDNP55196 1824 aaKnown RBP15.61■□□□□ 0.09
CTNNA1-205ENST00000517904 PRELPP51888 382 aa15.61■□□□□ 0.09
CTNNA1-205ENST00000517904 USPL1Q5W0Q7 1092 aa15.61■□□□□ 0.09
CTNNA1-205ENST00000517904 DNAJC10Q8IXB1 793 aa15.6■□□□□ 0.09
CTNNA1-205ENST00000517904 NRXN2Q9P2S2 1712 aa15.6■□□□□ 0.09
CTNNA1-205ENST00000517904 DLEC1Q9Y238 1755 aa15.59■□□□□ 0.09
CTNNA1-205ENST00000517904 SULT6B1Q6IMI4 303 aa15.59■□□□□ 0.09
CTNNA1-205ENST00000517904 SMC1BQ8NDV3 1235 aa15.59■□□□□ 0.09
CTNNA1-205ENST00000517904 SOS1Q07889 1333 aaPredicted RBP15.59■□□□□ 0.09
CTNNA1-205ENST00000517904 ZPR1O75312 459 aa15.58■□□□□ 0.08
CTNNA1-205ENST00000517904 PANK3Q9H999 370 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms