RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 BRINP3Q76B58 766 aa13.56□□□□□ -0.24
CPEB4-203ENST00000517880 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
CPEB4-203ENST00000517880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.56□□□□□ -0.245e-7■□□□□ 10.6
CPEB4-203ENST00000517880 MIS18AQ9NYP9 233 aa13.56□□□□□ -0.24
CPEB4-203ENST00000517880 PDZRN3Q9UPQ7 1066 aa13.56□□□□□ -0.24
CPEB4-203ENST00000517880 ERBB3P21860 1342 aa13.55□□□□□ -0.24
CPEB4-203ENST00000517880 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
CPEB4-203ENST00000517880 ZC3H6P61129 1189 aaKnown RBP13.55□□□□□ -0.24
CPEB4-203ENST00000517880 GCC1Q96CN9 775 aa13.55□□□□□ -0.24
CPEB4-203ENST00000517880 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
CPEB4-203ENST00000517880 ZBTB12Q9Y330 459 aaPredicted RBP13.55□□□□□ -0.24
CPEB4-203ENST00000517880 FAM208AQ9UK61 1670 aaKnown RBP13.54□□□□□ -0.24
CPEB4-203ENST00000517880 SOS2Q07890 1332 aaPredicted RBP13.53□□□□□ -0.24
CPEB4-203ENST00000517880 COL18A1P39060 1754 aa13.53□□□□□ -0.24
CPEB4-203ENST00000517880 CCT4P50991 539 aaKnown RBP13.53□□□□□ -0.24
CPEB4-203ENST00000517880 TEFQ10587 303 aa13.53□□□□□ -0.24
CPEB4-203ENST00000517880 KRT24Q2M2I5 525 aa13.53□□□□□ -0.24
CPEB4-203ENST00000517880 RAPGEF4Q8WZA2 1011 aa13.53□□□□□ -0.24
CPEB4-203ENST00000517880 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
CPEB4-203ENST00000517880 TATP17735 454 aaPredicted RBP13.52□□□□□ -0.25
CPEB4-203ENST00000517880 SPG7Q9UQ90 795 aa13.52□□□□□ -0.25
CPEB4-203ENST00000517880 ZNF335Q9H4Z2 1342 aaPredicted RBP13.52□□□□□ -0.25
CPEB4-203ENST00000517880 C8orf34Q49A92 452 aa13.51□□□□□ -0.25
CPEB4-203ENST00000517880 SKAP1Q86WV1 359 aa13.51□□□□□ -0.25
CPEB4-203ENST00000517880 RPAP2Q8IXW5 612 aaPredicted RBP13.51□□□□□ -0.25
CPEB4-203ENST00000517880 DDX17Q92841 729 aaKnown RBP13.51□□□□□ -0.25
CPEB4-203ENST00000517880 IPO9Q96P70 1041 aaKnown RBP13.51□□□□□ -0.25
CPEB4-203ENST00000517880 LGR6Q9HBX8 967 aa13.51□□□□□ -0.25
CPEB4-203ENST00000517880 RGPD5Q99666 1765 aa13.51□□□□□ -0.25
CPEB4-203ENST00000517880 RGS12O14924 1447 aa13.51□□□□□ -0.25
CPEB4-203ENST00000517880 CRYBG1Q9Y4K1 1723 aa13.5□□□□□ -0.25
CPEB4-203ENST00000517880 EIF4A1P60842 406 aaKnown RBP13.5□□□□□ -0.25
CPEB4-203ENST00000517880 NUCB1Q02818 461 aa13.5□□□□□ -0.25
CPEB4-203ENST00000517880 NLRP2Q9NX02 1062 aa13.5□□□□□ -0.25
CPEB4-203ENST00000517880 BTBD11A6QL63 1104 aa13.49□□□□□ -0.25
CPEB4-203ENST00000517880 DDRGK1Q96HY6 314 aa13.49□□□□□ -0.25
CPEB4-203ENST00000517880 KDM3BQ7LBC6 1761 aa13.49□□□□□ -0.25
CPEB4-203ENST00000517880 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
CPEB4-203ENST00000517880 CSB-PGBD3P0DP91 1061 aa13.48□□□□□ -0.25
CPEB4-203ENST00000517880 ADAMTS7Q9UKP4 1686 aa13.48□□□□□ -0.25
CPEB4-203ENST00000517880 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
CPEB4-203ENST00000517880 HSP90AB1P08238 724 aaKnown RBP13.47□□□□□ -0.25
CPEB4-203ENST00000517880 FLIIQ13045 1269 aa13.47□□□□□ -0.25
CPEB4-203ENST00000517880 MPRIPQ6WCQ1 1025 aa13.47□□□□□ -0.25
CPEB4-203ENST00000517880 ANKRD44Q8N8A2 993 aa13.47□□□□□ -0.25
CPEB4-203ENST00000517880 HDGFL1Q5TGJ6 251 aa13.47□□□□□ -0.25
CPEB4-203ENST00000517880 CHD1LQ86WJ1 897 aa13.47□□□□□ -0.25
CPEB4-203ENST00000517880 IFNL2Q8IZJ0 200 aa13.47□□□□□ -0.25
CPEB4-203ENST00000517880 CABLES1Q8TDN4 633 aa13.47□□□□□ -0.25
CPEB4-203ENST00000517880 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.26
CPEB4-203ENST00000517880 PXDNLA1KZ92 1463 aa13.46□□□□□ -0.26
CPEB4-203ENST00000517880 GNAI3P08754 354 aa13.46□□□□□ -0.26
CPEB4-203ENST00000517880 ERICH6Q7L0X2 663 aa13.46□□□□□ -0.26
CPEB4-203ENST00000517880 G2E3Q7L622 706 aa13.46□□□□□ -0.26
CPEB4-203ENST00000517880 DCTPP1Q9H773 170 aa13.46□□□□□ -0.26
CPEB4-203ENST00000517880 ZBTB47Q9UFB7 747 aaPredicted RBP13.46□□□□□ -0.26
CPEB4-203ENST00000517880 HEG1Q9ULI3 1381 aa13.45□□□□□ -0.26
CPEB4-203ENST00000517880 HMMRO75330 724 aa13.45□□□□□ -0.26
CPEB4-203ENST00000517880 FKBP5Q13451 457 aaPredicted RBP13.45□□□□□ -0.26
CPEB4-203ENST00000517880 SIRT2Q8IXJ6 389 aa13.45□□□□□ -0.26
CPEB4-203ENST00000517880 NHSL1Q5SYE7 1610 aa13.44□□□□□ -0.26
CPEB4-203ENST00000517880 GABBR2O75899 941 aa13.44□□□□□ -0.26
CPEB4-203ENST00000517880 PHKG2P15735 406 aa13.44□□□□□ -0.26
CPEB4-203ENST00000517880 CHRNA2Q15822 529 aa13.44□□□□□ -0.26
CPEB4-203ENST00000517880 DCAF5Q96JK2 942 aa13.44□□□□□ -0.26
CPEB4-203ENST00000517880 PRDM11Q9NQV5 511 aa13.44□□□□□ -0.26
CPEB4-203ENST00000517880 SIPA1L3O60292 1781 aaPredicted RBP13.44□□□□□ -0.26
CPEB4-203ENST00000517880 WDR17Q8IZU2 1322 aa13.43□□□□□ -0.26
CPEB4-203ENST00000517880 EIF5BO60841 1220 aaKnown RBP13.43□□□□□ -0.26
CPEB4-203ENST00000517880 ANKRD45Q5TZF3 282 aa13.43□□□□□ -0.26
CPEB4-203ENST00000517880 SLC4A10Q6U841 1118 aa13.43□□□□□ -0.26
CPEB4-203ENST00000517880 UPF2Q9HAU5 1272 aaKnown RBP13.43□□□□□ -0.26
CPEB4-203ENST00000517880 DBF4Q9UBU7 674 aaPredicted RBP13.43□□□□□ -0.26
CPEB4-203ENST00000517880 NOP58Q9Y2X3 529 aaKnown RBP13.43□□□□□ -0.26
CPEB4-203ENST00000517880 SCN11AQ9UI33 1791 aa13.43□□□□□ -0.26
CPEB4-203ENST00000517880 GIGYF1O75420 1035 aaPredicted RBP13.42□□□□□ -0.26
CPEB4-203ENST00000517880 GNAI2P04899 355 aa13.42□□□□□ -0.26
CPEB4-203ENST00000517880 CEP85Q6P2H3 762 aa13.42□□□□□ -0.26
CPEB4-203ENST00000517880 NPM2Q86SE8 214 aaKnown RBP13.42□□□□□ -0.26
CPEB4-203ENST00000517880 C1orf115Q9H7X2 142 aa13.42□□□□□ -0.26
CPEB4-203ENST00000517880 SLC52A2Q9HAB3 445 aa13.42□□□□□ -0.26
CPEB4-203ENST00000517880 N4BP2Q86UW6 1770 aaPredicted RBP13.42□□□□□ -0.26
CPEB4-203ENST00000517880 PKD1L3Q7Z443 1732 aa13.42□□□□□ -0.26
CPEB4-203ENST00000517880 MEIS3Q99687 375 aa13.41□□□□□ -0.26
CPEB4-203ENST00000517880 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
CPEB4-203ENST00000517880 F6X3S4 739 aa13.4□□□□□ -0.26
CPEB4-203ENST00000517880 EIF2S2P20042 333 aaKnown RBP13.4□□□□□ -0.26
CPEB4-203ENST00000517880 HYPKQ9NX55 129 aa13.4□□□□□ -0.26
CPEB4-203ENST00000517880 HDAC5Q9UQL6 1122 aa13.4□□□□□ -0.26
CPEB4-203ENST00000517880 ATP10DQ9P241 1426 aa13.4□□□□□ -0.26
CPEB4-203ENST00000517880 MEGF6O75095 1541 aa13.4□□□□□ -0.26
CPEB4-203ENST00000517880 KCNQ3O43525 872 aa13.39□□□□□ -0.27
CPEB4-203ENST00000517880 BMP2KLQ5H9B9 411 aa13.39□□□□□ -0.27
CPEB4-203ENST00000517880 ZNF790Q6PG37 636 aa13.39□□□□□ -0.27
CPEB4-203ENST00000517880 TOM1L2Q6ZVM7 507 aa13.39□□□□□ -0.27
CPEB4-203ENST00000517880 NECTIN2Q92692 538 aa13.39□□□□□ -0.27
CPEB4-203ENST00000517880 LNPKQ9C0E8 428 aa13.39□□□□□ -0.27
CPEB4-203ENST00000517880 PARP4Q9UKK3 1724 aaKnown RBP13.39□□□□□ -0.27
CPEB4-203ENST00000517880 ZCRB1Q8TBF4 217 aaKnown RBP13.39□□□□□ -0.27
CPEB4-203ENST00000517880 SRCIN1Q9C0H9 1055 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms