RNA–Protein interactions for RNA: ENST00000517619.5

SPIDR-202, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3

Gene SPIDR, Length 335 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-202ENST00000517619 VIRMAQ69YN4 1812 aaKnown RBP13.13□□□□□ -0.31
SPIDR-202ENST00000517619 KDRP35968 1356 aa13.13□□□□□ -0.31
SPIDR-202ENST00000517619 GNPATO15228 680 aa13.13□□□□□ -0.31
SPIDR-202ENST00000517619 GRIN3BO60391 1043 aa13.13□□□□□ -0.31
SPIDR-202ENST00000517619 ATG3Q9NT62 314 aa13.13□□□□□ -0.31
SPIDR-202ENST00000517619 C4AP0C0L4 1744 aa13.13□□□□□ -0.31
SPIDR-202ENST00000517619 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
SPIDR-202ENST00000517619 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
SPIDR-202ENST00000517619 KIF13BQ9NQT8 1826 aa13.11□□□□□ -0.31
SPIDR-202ENST00000517619 MORC1Q86VD1 984 aa13.11□□□□□ -0.31
SPIDR-202ENST00000517619 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
SPIDR-202ENST00000517619 KIAA1551Q9HCM1 1747 aa13.1□□□□□ -0.31
SPIDR-202ENST00000517619 ERVV-2B6SEH9 535 aa13.1□□□□□ -0.31
SPIDR-202ENST00000517619 HSP90AB1P08238 724 aaKnown RBP13.1□□□□□ -0.31
SPIDR-202ENST00000517619 C1QTNF8P60827 252 aa13.1□□□□□ -0.31
SPIDR-202ENST00000517619 PLEKHO1Q53GL0 409 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-202ENST00000517619 ZNF530Q6P9A1 599 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-202ENST00000517619 AEBP1Q8IUX7 1158 aa13.1□□□□□ -0.31
SPIDR-202ENST00000517619 DCAF5Q96JK2 942 aa13.1□□□□□ -0.31
SPIDR-202ENST00000517619 TJP1Q07157 1748 aa13.1□□□□□ -0.31
SPIDR-202ENST00000517619 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-202ENST00000517619 N4BP2Q86UW6 1770 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-202ENST00000517619 SENP3-EIF4A1A0A087X0R7 540 aa13.09□□□□□ -0.31
SPIDR-202ENST00000517619 GIGYF1O75420 1035 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-202ENST00000517619 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
SPIDR-202ENST00000517619 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
SPIDR-202ENST00000517619 WWC3Q9ULE0 1092 aa13.09□□□□□ -0.31
SPIDR-202ENST00000517619 KNSTRNQ9Y448 316 aa13.09□□□□□ -0.31
SPIDR-202ENST00000517619 CABP4P57796 275 aa13.08□□□□□ -0.32
SPIDR-202ENST00000517619 SLC4A9Q96Q91 983 aa13.08□□□□□ -0.32
SPIDR-202ENST00000517619 ATP10DQ9P241 1426 aa13.07□□□□□ -0.32
SPIDR-202ENST00000517619 C1orf141Q5JVX7 400 aa13.07□□□□□ -0.32
SPIDR-202ENST00000517619 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
SPIDR-202ENST00000517619 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
SPIDR-202ENST00000517619 MMP10P09238 476 aa13.06□□□□□ -0.32
SPIDR-202ENST00000517619 MTHFSP49914 203 aa13.06□□□□□ -0.32
SPIDR-202ENST00000517619 TRAPPC3LQ5T215 181 aa13.06□□□□□ -0.32
SPIDR-202ENST00000517619 KIF7Q2M1P5 1343 aa13.06□□□□□ -0.32
SPIDR-202ENST00000517619 BRCA1P38398 1863 aaKnown RBP13.06□□□□□ -0.32
SPIDR-202ENST00000517619 IL13P35225 146 aa13.05□□□□□ -0.32
SPIDR-202ENST00000517619 CNTNAP4Q9C0A0 1308 aa13.05□□□□□ -0.32
SPIDR-202ENST00000517619 ADCY9O60503 1353 aa13.05□□□□□ -0.32
SPIDR-202ENST00000517619 PXDNLA1KZ92 1463 aa13.04□□□□□ -0.32
SPIDR-202ENST00000517619 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
SPIDR-202ENST00000517619 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-202ENST00000517619 C10orf71Q711Q0 1435 aa13.04□□□□□ -0.32
SPIDR-202ENST00000517619 ADRA2BP18089 450 aa13.03□□□□□ -0.32
SPIDR-202ENST00000517619 RC3H1Q5TC82 1133 aaKnown RBP13.03□□□□□ -0.32
SPIDR-202ENST00000517619 NLGN1Q8N2Q7 840 aa13.03□□□□□ -0.32
SPIDR-202ENST00000517619 NFATC2IPQ8NCF5 419 aa13.03□□□□□ -0.32
SPIDR-202ENST00000517619 ARHGEF1Q92888 912 aaKnown RBP13.03□□□□□ -0.32
SPIDR-202ENST00000517619 MRC1P22897 1456 aa13.03□□□□□ -0.32
SPIDR-202ENST00000517619 ADAMTS7Q9UKP4 1686 aa13.02□□□□□ -0.32
SPIDR-202ENST00000517619 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
SPIDR-202ENST00000517619 RFC4P35249 363 aa13.02□□□□□ -0.33
SPIDR-202ENST00000517619 ZNF526Q8TF50 670 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-202ENST00000517619 GPBP1L1Q9HC44 474 aaPredicted RBP13.02□□□□□ -0.33
SPIDR-202ENST00000517619 HMOX1P09601 288 aa13.01□□□□□ -0.33
SPIDR-202ENST00000517619 GYS1P13807 737 aa13.01□□□□□ -0.33
SPIDR-202ENST00000517619 CRKLP46109 303 aaKnown RBP13.01□□□□□ -0.33
SPIDR-202ENST00000517619 UBR2Q8IWV8 1755 aa13.01□□□□□ -0.33
SPIDR-202ENST00000517619 ARFGEF1Q9Y6D6 1849 aa13.01□□□□□ -0.33
SPIDR-202ENST00000517619 AKAP4Q5JQC9 854 aa13□□□□□ -0.33
SPIDR-202ENST00000517619 CC2D1BQ5T0F9 858 aaKnown RBP13□□□□□ -0.33
SPIDR-202ENST00000517619 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
SPIDR-202ENST00000517619 A0A0G2JLW4 131 aa12.99□□□□□ -0.33
SPIDR-202ENST00000517619 TGFB2P61812 414 aa12.99□□□□□ -0.33
SPIDR-202ENST00000517619 SLC52A2Q9HAB3 445 aa12.99□□□□□ -0.33
SPIDR-202ENST00000517619 BCS1LQ9Y276 419 aa12.99□□□□□ -0.33
SPIDR-202ENST00000517619 PARP3Q9Y6F1 533 aa12.99□□□□□ -0.33
SPIDR-202ENST00000517619 KCPQ6ZWJ8 1503 aa12.98□□□□□ -0.33
SPIDR-202ENST00000517619 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
SPIDR-202ENST00000517619 PER1O15534 1290 aaPredicted RBP12.98□□□□□ -0.33
SPIDR-202ENST00000517619 LGR6Q9HBX8 967 aa12.98□□□□□ -0.33
SPIDR-202ENST00000517619 SRP68Q9UHB9 627 aaKnown RBP12.98□□□□□ -0.33
SPIDR-202ENST00000517619 CEP350Q5VT06 3117 aa12.98□□□□□ -0.33
SPIDR-202ENST00000517619 COL3A1P02461 1466 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-202ENST00000517619 AFDNP55196 1824 aaKnown RBP12.97□□□□□ -0.33
SPIDR-202ENST00000517619 DIAPH1O60610 1272 aaKnown RBP12.97□□□□□ -0.33
SPIDR-202ENST00000517619 DPEP1P16444 411 aa12.97□□□□□ -0.33
SPIDR-202ENST00000517619 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-202ENST00000517619 RNMTO43148 476 aaKnown RBP12.96□□□□□ -0.33
SPIDR-202ENST00000517619 CNGB1Q14028 1251 aaPredicted RBP12.96□□□□□ -0.33
SPIDR-202ENST00000517619 FKBP8Q14318 412 aa12.96□□□□□ -0.33
SPIDR-202ENST00000517619 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.33
SPIDR-202ENST00000517619 INTS5Q6P9B9 1019 aaKnown RBP12.96□□□□□ -0.33
SPIDR-202ENST00000517619 DNAJC10Q8IXB1 793 aa12.96□□□□□ -0.33
SPIDR-202ENST00000517619 DDR1Q08345 913 aa12.95□□□□□ -0.34
SPIDR-202ENST00000517619 SLC39A6Q13433 755 aa12.95□□□□□ -0.34
SPIDR-202ENST00000517619 DLEC1Q9Y238 1755 aa12.94□□□□□ -0.34
SPIDR-202ENST00000517619 SOS1Q07889 1333 aaPredicted RBP12.94□□□□□ -0.34
SPIDR-202ENST00000517619 NRXN2Q9P2S2 1712 aa12.94□□□□□ -0.34
SPIDR-202ENST00000517619 FCHSD2O94868 740 aa12.94□□□□□ -0.34
SPIDR-202ENST00000517619 COL15A1P39059 1388 aa12.94□□□□□ -0.34
SPIDR-202ENST00000517619 ZPR1O75312 459 aa12.93□□□□□ -0.34
SPIDR-202ENST00000517619 CYP19A1P11511 503 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-202ENST00000517619 ARHGAP27Q6ZUM4 889 aa12.93□□□□□ -0.34
SPIDR-202ENST00000517619 NPC1L1Q9UHC9 1359 aa12.93□□□□□ -0.34
SPIDR-202ENST00000517619 SCN7AQ01118 1682 aa12.93□□□□□ -0.34
SPIDR-202ENST00000517619 POLRMTO00411 1230 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms