RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 USP3Q9Y6I4 520 aa10.95□□□□□ -0.66
SCARNA1-201ENST00000517138 ARID3CA6NKF2 412 aa10.94□□□□□ -0.66
SCARNA1-201ENST00000517138 PHKA2P46019 1235 aa10.94□□□□□ -0.66
SCARNA1-201ENST00000517138 TLR1Q15399 786 aa10.94□□□□□ -0.66
SCARNA1-201ENST00000517138 SLC16A10Q8TF71 515 aa10.94□□□□□ -0.66
SCARNA1-201ENST00000517138 SPATA31C2B4DYI2 1134 aa10.93□□□□□ -0.66
SCARNA1-201ENST00000517138 GMPRP36959 345 aa10.93□□□□□ -0.66
SCARNA1-201ENST00000517138 PSME1Q06323 249 aa10.93□□□□□ -0.66
SCARNA1-201ENST00000517138 CFAP70Q5T0N1 1121 aa10.93□□□□□ -0.66
SCARNA1-201ENST00000517138 GPR161Q8N6U8 529 aaKnown RBP10.93□□□□□ -0.66
SCARNA1-201ENST00000517138 ITGA6P23229 1130 aa10.92□□□□□ -0.66
SCARNA1-201ENST00000517138 LMOD1P29536 600 aaPredicted RBP10.92□□□□□ -0.66
SCARNA1-201ENST00000517138 C4orf17Q53FE4 359 aa10.92□□□□□ -0.66
SCARNA1-201ENST00000517138 OGFOD1Q8N543 542 aa10.92□□□□□ -0.66
SCARNA1-201ENST00000517138 ZNF358Q9NW07 568 aa10.92□□□□□ -0.66
SCARNA1-201ENST00000517138 WASLO00401 505 aaPredicted RBP10.91□□□□□ -0.66
SCARNA1-201ENST00000517138 DKK1O94907 266 aa10.91□□□□□ -0.66
SCARNA1-201ENST00000517138 TAS1R3Q7RTX0 852 aa10.91□□□□□ -0.66
SCARNA1-201ENST00000517138 TPCN2Q8NHX9 752 aa10.91□□□□□ -0.66
SCARNA1-201ENST00000517138 ZNF594Q96JF6 807 aaPredicted RBP10.91□□□□□ -0.66
SCARNA1-201ENST00000517138 VSIG8P0DPA2 414 aa10.9□□□□□ -0.66
SCARNA1-201ENST00000517138 SMTNP53814 917 aa10.9□□□□□ -0.66
SCARNA1-201ENST00000517138 KANK4Q5T7N3 995 aaPredicted RBP10.9□□□□□ -0.66
SCARNA1-201ENST00000517138 TMEM214Q6NUQ4 689 aaKnown RBP10.9□□□□□ -0.66
SCARNA1-201ENST00000517138 IRF7Q92985 503 aa10.9□□□□□ -0.66
SCARNA1-201ENST00000517138 DNAAF2Q9NVR5 837 aaKnown RBP10.9□□□□□ -0.66
SCARNA1-201ENST00000517138 CCDC102BQ68D86 513 aa10.89□□□□□ -0.67
SCARNA1-201ENST00000517138 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
SCARNA1-201ENST00000517138 TRIM50Q86XT4 487 aa10.89□□□□□ -0.67
SCARNA1-201ENST00000517138 PPARGC1BQ86YN6 1023 aaKnown RBP10.89□□□□□ -0.67
SCARNA1-201ENST00000517138 VWA5B2Q8N398 1253 aa10.89□□□□□ -0.67
SCARNA1-201ENST00000517138 SLC4A9Q96Q91 983 aa10.89□□□□□ -0.67
SCARNA1-201ENST00000517138 GAS2L1Q99501 681 aaPredicted RBP10.89□□□□□ -0.67
SCARNA1-201ENST00000517138 RFX1P22670 979 aa10.88□□□□□ -0.67
SCARNA1-201ENST00000517138 CRTC2Q53ET0 693 aaPredicted RBP10.88□□□□□ -0.67
SCARNA1-201ENST00000517138 CDCA8Q53HL2 280 aa10.88□□□□□ -0.67
SCARNA1-201ENST00000517138 ZNF295-AS1Q8N0V1 137 aa10.88□□□□□ -0.67
SCARNA1-201ENST00000517138 TIMMDC1Q9NPL8 285 aa10.88□□□□□ -0.67
SCARNA1-201ENST00000517138 IQSEC3Q9UPP2 1182 aaPredicted RBP10.88□□□□□ -0.67
SCARNA1-201ENST00000517138 CDC14CA4D256 554 aa10.87□□□□□ -0.67
SCARNA1-201ENST00000517138 A6NJY4 79 aa10.87□□□□□ -0.67
SCARNA1-201ENST00000517138 SFI1A8K8P3 1242 aa10.87□□□□□ -0.67
SCARNA1-201ENST00000517138 RASA1P20936 1047 aa10.87□□□□□ -0.67
SCARNA1-201ENST00000517138 MTFR1Q15390 333 aa10.87□□□□□ -0.67
SCARNA1-201ENST00000517138 TBCELQ5QJ74 424 aa10.87□□□□□ -0.67
SCARNA1-201ENST00000517138 TNS4Q8IZW8 715 aa10.87□□□□□ -0.67
SCARNA1-201ENST00000517138 DYRK1BQ9Y463 629 aa10.87□□□□□ -0.67
SCARNA1-201ENST00000517138 ATP1A2P50993 1020 aa10.86□□□□□ -0.67
SCARNA1-201ENST00000517138 EPHA4P54764 986 aa10.86□□□□□ -0.67
SCARNA1-201ENST00000517138 DBN1Q16643 649 aa10.86□□□□□ -0.67
SCARNA1-201ENST00000517138 RIPOR1Q6ZS17 1223 aa10.86□□□□□ -0.67
SCARNA1-201ENST00000517138 RHBDD1Q8TEB9 315 aa10.86□□□□□ -0.67
SCARNA1-201ENST00000517138 THBS1P07996 1170 aa10.85□□□□□ -0.67
SCARNA1-201ENST00000517138 WDR44Q5JSH3 913 aa10.85□□□□□ -0.67
SCARNA1-201ENST00000517138 GNASQ5JWF2 1037 aa10.85□□□□□ -0.67
SCARNA1-201ENST00000517138 LARGE2Q8N3Y3 721 aa10.85□□□□□ -0.67
SCARNA1-201ENST00000517138 NANOS1Q8WY41 292 aaKnown RBP10.85□□□□□ -0.67
SCARNA1-201ENST00000517138 C1orf115Q9H7X2 142 aa10.85□□□□□ -0.67
SCARNA1-201ENST00000517138 GPAMQ9HCL2 828 aa10.85□□□□□ -0.67
SCARNA1-201ENST00000517138 WIPF1O43516 503 aa10.84□□□□□ -0.67
SCARNA1-201ENST00000517138 LGR5O75473 907 aa10.84□□□□□ -0.67
SCARNA1-201ENST00000517138 PLA2G4AP47712 749 aa10.84□□□□□ -0.67
SCARNA1-201ENST00000517138 KRT76Q01546 638 aa10.84□□□□□ -0.67
SCARNA1-201ENST00000517138 SIX5Q8N196 739 aa10.84□□□□□ -0.67
SCARNA1-201ENST00000517138 PARP3Q9Y6F1 533 aa10.84□□□□□ -0.67
SCARNA1-201ENST00000517138 PTK7Q13308 1070 aa10.83□□□□□ -0.68
SCARNA1-201ENST00000517138 TSEN2Q8NCE0 465 aaKnown RBP10.83□□□□□ -0.68
SCARNA1-201ENST00000517138 ZNF837Q96EG3 531 aaPredicted RBP10.83□□□□□ -0.68
SCARNA1-201ENST00000517138 SCHIP1Q9P0W5 487 aaPredicted RBP10.83□□□□□ -0.68
SCARNA1-201ENST00000517138 CDK2AP1O14519 115 aa10.82□□□□□ -0.68
SCARNA1-201ENST00000517138 BACH1O14867 736 aa10.82□□□□□ -0.68
SCARNA1-201ENST00000517138 GTF2E1P29083 439 aaPredicted RBP10.82□□□□□ -0.68
SCARNA1-201ENST00000517138 FOXK2Q01167 660 aa10.82□□□□□ -0.68
SCARNA1-201ENST00000517138 RNFT1Q5M7Z0 435 aa10.82□□□□□ -0.68
SCARNA1-201ENST00000517138 VRTNQ9H8Y1 702 aa10.82□□□□□ -0.68
SCARNA1-201ENST00000517138 USP17L15C9J2P7 530 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 USP17L10C9JJH3 530 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 USP17L13C9JLJ4 530 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 USP17L12C9JPN9 530 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 USP17L11C9JVI0 530 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 USP17L21D6R901 530 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 USP17L18D6R9N7 530 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 USP17L22D6RA61 530 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 USP17L17D6RBQ6 530 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 USP17L19D6RCP7 530 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 USP17L20D6RJB6 530 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 GPR25O00155 361 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 MSX1P28360 303 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 USP17L24Q0WX57 530 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 SV2AQ7L0J3 742 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 ZDHHC1Q8WTX9 485 aa10.81□□□□□ -0.68
SCARNA1-201ENST00000517138 F11P03951 625 aa10.8□□□□□ -0.68
SCARNA1-201ENST00000517138 LORP23490 312 aaPredicted RBP10.8□□□□□ -0.68
SCARNA1-201ENST00000517138 DPYDQ12882 1025 aa10.8□□□□□ -0.68
SCARNA1-201ENST00000517138 SH3PXD2AQ5TCZ1 1133 aa10.8□□□□□ -0.68
SCARNA1-201ENST00000517138 SLC9A9Q8IVB4 645 aa10.8□□□□□ -0.68
SCARNA1-201ENST00000517138 TRIM22Q8IYM9 498 aa10.8□□□□□ -0.68
SCARNA1-201ENST00000517138 GAS2L2Q8NHY3 880 aa10.8□□□□□ -0.68
SCARNA1-201ENST00000517138 COL25A1Q9BXS0 654 aaPredicted RBP10.8□□□□□ -0.68
SCARNA1-201ENST00000517138 NIFKQ9BYG3 293 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms