RNA–Protein interactions for RNA: ENST00000517041.1

RNU1-117P-201, Transcript of RNA, U1 small nuclear 117, pseudogene, humanhuman

BASIC

Gene RNU1-117P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-117P-201ENST00000517041 CDK2AP1O14519 115 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 RASA1P20936 1047 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 LMOD1P29536 600 aaPredicted RBP4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 CTSOP43234 321 aaPredicted RBP4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 SMTNP53814 917 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 CLDN10P78369 228 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 USP17L24Q0WX57 530 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 PTK7Q13308 1070 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 LBRQ14739 615 aaKnown RBP4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 TLR1Q15399 786 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 SWI5Q1ZZU3 235 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 TSGA10IPQ3SY00 556 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 GNASQ5JWF2 1037 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 SLC27A3Q5K4L6 730 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 PPARGC1BQ86YN6 1023 aaKnown RBP4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 STAG2Q8N3U4 1231 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 CCDC82Q8N4S0 544 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 C1orf216Q8TAB5 229 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 RHBDD1Q8TEB9 315 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 AGBL1Q96MI9 1066 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 ZSCAN10Q96SZ4 725 aaPredicted RBP4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 INSM2Q96T92 566 aaPredicted RBP4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 DNMT3LQ9UJW3 386 aa4.28□□□□□ -1.72
RNU1-117P-201ENST00000517041 A6NJY4 79 aa4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 TMEM229AB2RXF0 380 aa4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 MEN1O00255 615 aa4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 DKK1O94907 266 aa4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 SEC13P55735 322 aa4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 SRPK2P78362 688 aaKnown RBP4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 PDE4CQ08493 712 aa4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 CCDC102BQ68D86 513 aa4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 POTEAQ6S8J7 498 aa4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 TAS1R3Q7RTX0 852 aa4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 DEPDC4Q8N2C3 294 aa4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 TPCN2Q8NHX9 752 aa4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 ZNF395Q9H8N7 513 aaPredicted RBP4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 ZNF358Q9NW07 568 aa4.27□□□□□ -1.73
RNU1-117P-201ENST00000517041 A0A1B0GTH6 734 aa4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 ZBTB7BO15156 539 aaPredicted RBP4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 VSIG8P0DPA2 414 aa4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 SNRPBP14678 240 aaKnown RBP4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 HIRAP54198 1017 aaPredicted RBP4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 EPHA4P54764 986 aa4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 CENPCQ03188 943 aa4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 ANKMY2Q8IV38 441 aa4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 NIFKQ9BYG3 293 aaKnown RBP4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 SCHIP1Q9P0W5 487 aaPredicted RBP4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 NXF1Q9UBU9 619 aaKnown RBP4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 CHMP3Q9Y3E7 222 aa4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 DYRK1BQ9Y463 629 aa4.26□□□□□ -1.73
RNU1-117P-201ENST00000517041 ACIN1Q9UKV3 1341 aaKnown RBP4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 SLC35F4A4IF30 521 aa4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 H7C1W4 665 aa4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 PSMA6P60900 246 aaKnown RBP4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 FOXK2Q01167 660 aa4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 CRTC2Q53ET0 693 aaPredicted RBP4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 TMEM214Q6NUQ4 689 aaKnown RBP4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 NBPF10Q6P3W6 841 aaKnown RBP4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 FAM200AQ8TCP9 573 aa4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 SLC16A10Q8TF71 515 aa4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 ARXQ96QS3 562 aa4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 C1orf115Q9H7X2 142 aa4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 RAB6BQ9NRW1 208 aa4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 ZDHHC3Q9NYG2 299 aa4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 IQSEC3Q9UPP2 1182 aaPredicted RBP4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 KIAA1024Q9UPX6 916 aa4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 USTQ9Y2C2 406 aa4.25□□□□□ -1.73
RNU1-117P-201ENST00000517041 ARID3CA6NKF2 412 aa4.24□□□□□ -1.73
RNU1-117P-201ENST00000517041 FOXO3O43524 673 aa4.24□□□□□ -1.73
RNU1-117P-201ENST00000517041 RFX1P22670 979 aa4.24□□□□□ -1.73
RNU1-117P-201ENST00000517041 IGFBP4P22692 258 aa4.24□□□□□ -1.73
RNU1-117P-201ENST00000517041 PTSQ03393 145 aa4.24□□□□□ -1.73
RNU1-117P-201ENST00000517041 HIF1AQ16665 826 aa4.24□□□□□ -1.73
RNU1-117P-201ENST00000517041 NBPF1Q3BBV0 1214 aa4.24□□□□□ -1.73
RNU1-117P-201ENST00000517041 ZNF295-AS1Q8N0V1 137 aa4.24□□□□□ -1.73
RNU1-117P-201ENST00000517041 NANOS1Q8WY41 292 aaKnown RBP4.24□□□□□ -1.73
RNU1-117P-201ENST00000517041 ZNF594Q96JF6 807 aaPredicted RBP4.24□□□□□ -1.73
RNU1-117P-201ENST00000517041 NOVA2Q9UNW9 492 aaKnown RBP4.24□□□□□ -1.73
RNU1-117P-201ENST00000517041 POTECB2RU33 542 aa4.23□□□□□ -1.73
RNU1-117P-201ENST00000517041 H3BM21 787 aa4.23□□□□□ -1.73
RNU1-117P-201ENST00000517041 TERTO14746 1132 aaKnown RBP4.23□□□□□ -1.73
RNU1-117P-201ENST00000517041 DPYDQ12882 1025 aa4.23□□□□□ -1.73
RNU1-117P-201ENST00000517041 TEAD4Q15561 434 aa4.23□□□□□ -1.73
RNU1-117P-201ENST00000517041 C1orf53Q5VUE5 145 aa4.23□□□□□ -1.73
RNU1-117P-201ENST00000517041 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU1-117P-201ENST00000517041 CRISPLD1Q9H336 500 aa4.23□□□□□ -1.73
RNU1-117P-201ENST00000517041 TIMMDC1Q9NPL8 285 aa4.23□□□□□ -1.73
RNU1-117P-201ENST00000517041 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.22□□□□□ -1.73
RNU1-117P-201ENST00000517041 SENP3-EIF4A1A0A087X0R7 540 aa4.22□□□□□ -1.73
RNU1-117P-201ENST00000517041 F11P03951 625 aa4.22□□□□□ -1.73
RNU1-117P-201ENST00000517041 TATP17735 454 aaPredicted RBP4.22□□□□□ -1.73
RNU1-117P-201ENST00000517041 ITGA6P23229 1130 aa4.22□□□□□ -1.73
RNU1-117P-201ENST00000517041 C4orf17Q53FE4 359 aa4.22□□□□□ -1.73
RNU1-117P-201ENST00000517041 B4GALNT3Q6L9W6 998 aa4.22□□□□□ -1.73
RNU1-117P-201ENST00000517041 PRICKLE2Q7Z3G6 844 aa4.22□□□□□ -1.73
RNU1-117P-201ENST00000517041 TRIM22Q8IYM9 498 aa4.22□□□□□ -1.73
RNU1-117P-201ENST00000517041 CCDC155Q8N6L0 562 aa4.22□□□□□ -1.73
RNU1-117P-201ENST00000517041 IRF7Q92985 503 aa4.22□□□□□ -1.73
RNU1-117P-201ENST00000517041 CLP1Q92989 425 aaKnown RBP4.22□□□□□ -1.73
RNU1-117P-201ENST00000517041 COL26A1Q96A83 441 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms