RNA–Protein interactions for RNA: ENST00000516883.1

SNORD60.2-201, Transcript of small nucleolar RNA, C/D box 60, humanhuman

BASIC

Gene SNORD60, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD60.2-201ENST00000516883 USP3Q9Y6I4 520 aa6.79□□□□□ -1.32
SNORD60.2-201ENST00000516883 USP17L3A6NCW0 530 aa6.78□□□□□ -1.32
SNORD60.2-201ENST00000516883 USP17L4A6NCW7 530 aa6.78□□□□□ -1.32
SNORD60.2-201ENST00000516883 ZBTB7BO15156 539 aaPredicted RBP6.78□□□□□ -1.32
SNORD60.2-201ENST00000516883 THBS1P07996 1170 aa6.78□□□□□ -1.32
SNORD60.2-201ENST00000516883 TLR1Q15399 786 aa6.78□□□□□ -1.32
SNORD60.2-201ENST00000516883 USP17L2Q6R6M4 530 aa6.78□□□□□ -1.32
SNORD60.2-201ENST00000516883 USP17L1Q7RTZ2 530 aa6.78□□□□□ -1.32
SNORD60.2-201ENST00000516883 GAS2L1Q99501 681 aaPredicted RBP6.78□□□□□ -1.32
SNORD60.2-201ENST00000516883 COL25A1Q9BXS0 654 aaPredicted RBP6.78□□□□□ -1.32
SNORD60.2-201ENST00000516883 TFIP11Q9UBB9 837 aaKnown RBP6.78□□□□□ -1.32
SNORD60.2-201ENST00000516883 NOD1Q9Y239 953 aa6.78□□□□□ -1.32
SNORD60.2-201ENST00000516883 DYRK1BQ9Y463 629 aa6.78□□□□□ -1.32
SNORD60.2-201ENST00000516883 LZTS3O60299 673 aaPredicted RBP6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 CLDN10P78369 228 aa6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 WDR44Q5JSH3 913 aa6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 TMEM214Q6NUQ4 689 aaKnown RBP6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 SV2AQ7L0J3 742 aa6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 PPARGC1BQ86YN6 1023 aaKnown RBP6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 PLEKHM2Q8IWE5 1019 aa6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 ZNF837Q96EG3 531 aaPredicted RBP6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 CNTNAP3BQ96NU0 1288 aa6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 CNTNAP3Q9BZ76 1288 aa6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 TIMMDC1Q9NPL8 285 aa6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 ZNF777Q9ULD5 760 aaPredicted RBP6.77□□□□□ -1.33
SNORD60.2-201ENST00000516883 SMTNP53814 917 aa6.76□□□□□ -1.33
SNORD60.2-201ENST00000516883 INSM1Q01101 510 aaPredicted RBP6.76□□□□□ -1.33
SNORD60.2-201ENST00000516883 RIPOR1Q6ZS17 1223 aa6.76□□□□□ -1.33
SNORD60.2-201ENST00000516883 ZNF295-AS1Q8N0V1 137 aa6.76□□□□□ -1.33
SNORD60.2-201ENST00000516883 CALR3Q96L12 384 aaKnown RBP6.76□□□□□ -1.33
SNORD60.2-201ENST00000516883 SLC4A9Q96Q91 983 aa6.76□□□□□ -1.33
SNORD60.2-201ENST00000516883 ZNF358Q9NW07 568 aa6.76□□□□□ -1.33
SNORD60.2-201ENST00000516883 PALM3A6NDB9 673 aaPredicted RBP6.75□□□□□ -1.33
SNORD60.2-201ENST00000516883 GPR25O00155 361 aa6.75□□□□□ -1.33
SNORD60.2-201ENST00000516883 GAS6Q14393 721 aa6.75□□□□□ -1.33
SNORD60.2-201ENST00000516883 MTFR1Q15390 333 aa6.75□□□□□ -1.33
SNORD60.2-201ENST00000516883 TRIM22Q8IYM9 498 aa6.75□□□□□ -1.33
SNORD60.2-201ENST00000516883 RHBDD1Q8TEB9 315 aa6.75□□□□□ -1.33
SNORD60.2-201ENST00000516883 MKRN1Q9UHC7 482 aaKnown RBP6.75□□□□□ -1.33
SNORD60.2-201ENST00000516883 IQSEC3Q9UPP2 1182 aaPredicted RBP6.75□□□□□ -1.33
SNORD60.2-201ENST00000516883 MAFBQ9Y5Q3 323 aaPredicted RBP6.75□□□□□ -1.33
SNORD60.2-201ENST00000516883 A6NJY4 79 aa6.74□□□□□ -1.33
SNORD60.2-201ENST00000516883 DKK1O94907 266 aa6.74□□□□□ -1.33
SNORD60.2-201ENST00000516883 PSME1Q06323 249 aa6.74□□□□□ -1.33
SNORD60.2-201ENST00000516883 ZSCAN1Q8NBB4 408 aa6.74□□□□□ -1.33
SNORD60.2-201ENST00000516883 PPP1R12CQ9BZL4 782 aa6.74□□□□□ -1.33
SNORD60.2-201ENST00000516883 GPAMQ9HCL2 828 aa6.74□□□□□ -1.33
SNORD60.2-201ENST00000516883 GTF3C3Q9Y5Q9 886 aa6.74□□□□□ -1.33
SNORD60.2-201ENST00000516883 F11P03951 625 aa6.73□□□□□ -1.33
SNORD60.2-201ENST00000516883 PLA2G4AP47712 749 aa6.73□□□□□ -1.33
SNORD60.2-201ENST00000516883 EPHA4P54764 986 aa6.73□□□□□ -1.33
SNORD60.2-201ENST00000516883 GNASQ5JWF2 1037 aa6.73□□□□□ -1.33
SNORD60.2-201ENST00000516883 OGFOD1Q8N543 542 aa6.73□□□□□ -1.33
SNORD60.2-201ENST00000516883 MSX1P28360 303 aa6.72□□□□□ -1.33
SNORD60.2-201ENST00000516883 UBAP2LQ14157 1087 aaKnown RBP6.72□□□□□ -1.33
SNORD60.2-201ENST00000516883 TBCELQ5QJ74 424 aa6.72□□□□□ -1.33
SNORD60.2-201ENST00000516883 CCDC102BQ68D86 513 aa6.72□□□□□ -1.33
SNORD60.2-201ENST00000516883 TNS4Q8IZW8 715 aa6.72□□□□□ -1.33
SNORD60.2-201ENST00000516883 TPCN2Q8NHX9 752 aa6.72□□□□□ -1.33
SNORD60.2-201ENST00000516883 GTPBP3Q969Y2 492 aaKnown RBP6.72□□□□□ -1.33
SNORD60.2-201ENST00000516883 RUBCNLQ9H714 662 aa6.72□□□□□ -1.33
SNORD60.2-201ENST00000516883 A0A1B0GTH6 734 aa6.71□□□□□ -1.34
SNORD60.2-201ENST00000516883 CDK2AP1O14519 115 aa6.71□□□□□ -1.34
SNORD60.2-201ENST00000516883 GTF2E1P29083 439 aaPredicted RBP6.71□□□□□ -1.34
SNORD60.2-201ENST00000516883 FOXK2Q01167 660 aa6.71□□□□□ -1.34
SNORD60.2-201ENST00000516883 KANK4Q5T7N3 995 aaPredicted RBP6.71□□□□□ -1.34
SNORD60.2-201ENST00000516883 TRIM50Q86XT4 487 aa6.71□□□□□ -1.34
SNORD60.2-201ENST00000516883 ZDHHC1Q8WTX9 485 aa6.71□□□□□ -1.34
SNORD60.2-201ENST00000516883 ZNF594Q96JF6 807 aaPredicted RBP6.71□□□□□ -1.34
SNORD60.2-201ENST00000516883 NUCKS1Q9H1E3 243 aaKnown RBP6.71□□□□□ -1.34
SNORD60.2-201ENST00000516883 DNAAF2Q9NVR5 837 aaKnown RBP6.71□□□□□ -1.34
SNORD60.2-201ENST00000516883 PARP3Q9Y6F1 533 aa6.71□□□□□ -1.34
SNORD60.2-201ENST00000516883 SFI1A8K8P3 1242 aa6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 H7C1W4 665 aa6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 BACH1O14867 736 aa6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 ATP4AP20648 1035 aa6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 LMOD1P29536 600 aaPredicted RBP6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 ATP1A2P50993 1020 aa6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 CFAP70Q5T0N1 1121 aa6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 LARGE2Q8N3Y3 721 aa6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 WHAMMQ8TF30 809 aa6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 GMCL1Q96IK5 515 aa6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 NIFKQ9BYG3 293 aaKnown RBP6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 ZMYND15Q9H091 742 aa6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 SCHIP1Q9P0W5 487 aaPredicted RBP6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 STK17AQ9UEE5 414 aa6.7□□□□□ -1.34
SNORD60.2-201ENST00000516883 RASA1P20936 1047 aa6.69□□□□□ -1.34
SNORD60.2-201ENST00000516883 CRTC2Q53ET0 693 aaPredicted RBP6.69□□□□□ -1.34
SNORD60.2-201ENST00000516883 SH3PXD2AQ5TCZ1 1133 aa6.69□□□□□ -1.34
SNORD60.2-201ENST00000516883 SIX5Q8N196 739 aa6.69□□□□□ -1.34
SNORD60.2-201ENST00000516883 AIDAQ96BJ3 306 aa6.69□□□□□ -1.34
SNORD60.2-201ENST00000516883 CABP1Q9NZU7 370 aa6.69□□□□□ -1.34
SNORD60.2-201ENST00000516883 SLURP2P0DP57 97 aa6.68□□□□□ -1.34
SNORD60.2-201ENST00000516883 TXLNAP40222 546 aa6.68□□□□□ -1.34
SNORD60.2-201ENST00000516883 ZNF385CQ66K41 422 aaPredicted RBP6.68□□□□□ -1.34
SNORD60.2-201ENST00000516883 SLC9A9Q8IVB4 645 aa6.68□□□□□ -1.34
SNORD60.2-201ENST00000516883 TSEN2Q8NCE0 465 aaKnown RBP6.68□□□□□ -1.34
SNORD60.2-201ENST00000516883 KLRG1Q96E93 195 aa6.68□□□□□ -1.34
SNORD60.2-201ENST00000516883 HCN2Q9UL51 889 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms