RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TRPA1O75762 1119 aa5.52□□□□□ -1.53
SCARNA13-201ENST00000516672 ITGB8P26012 769 aa5.52□□□□□ -1.53
SCARNA13-201ENST00000516672 FMR1Q06787 632 aaKnown RBP eCLIP5.52□□□□□ -1.53
SCARNA13-201ENST00000516672 INTS3Q68E01 1043 aaKnown RBP5.52□□□□□ -1.53
SCARNA13-201ENST00000516672 MAFAQ8NHW3 353 aaPredicted RBP5.52□□□□□ -1.53
SCARNA13-201ENST00000516672 RALYQ9UKM9 306 aaKnown RBP5.52□□□□□ -1.53
SCARNA13-201ENST00000516672 HDAC9Q9UKV0 1011 aa5.52□□□□□ -1.53
SCARNA13-201ENST00000516672 KIF13BQ9NQT8 1826 aa5.52□□□□□ -1.53
SCARNA13-201ENST00000516672 PRXQ9BXM0 1461 aa5.51□□□□□ -1.53
SCARNA13-201ENST00000516672 CASKIN1Q8WXD9 1431 aa5.51□□□□□ -1.53
SCARNA13-201ENST00000516672 NHLH1Q02575 133 aa5.51□□□□□ -1.53
SCARNA13-201ENST00000516672 DALRD3Q5D0E6 543 aaKnown RBP5.51□□□□□ -1.53
SCARNA13-201ENST00000516672 TAF1DQ9H5J8 278 aaPredicted RBP5.51□□□□□ -1.53
SCARNA13-201ENST00000516672 RNF186Q9NXI6 227 aa5.51□□□□□ -1.53
SCARNA13-201ENST00000516672 ITSN1Q15811 1721 aa5.51□□□□□ -1.53
SCARNA13-201ENST00000516672 DDNO94850 711 aaPredicted RBP5.5□□□□□ -1.53
SCARNA13-201ENST00000516672 KCNA3P22001 575 aa5.5□□□□□ -1.53
SCARNA13-201ENST00000516672 ZC3H6P61129 1189 aaKnown RBP5.5□□□□□ -1.53
SCARNA13-201ENST00000516672 ERMP1Q7Z2K6 904 aa5.5□□□□□ -1.53
SCARNA13-201ENST00000516672 ANKRD24Q8TF21 1146 aa5.5□□□□□ -1.53
SCARNA13-201ENST00000516672 DPF3Q92784 378 aa5.5□□□□□ -1.53
SCARNA13-201ENST00000516672 PIM2Q9P1W9 311 aa5.5□□□□□ -1.53
SCARNA13-201ENST00000516672 USP54Q70EL1 1684 aa5.5□□□□□ -1.53
SCARNA13-201ENST00000516672 IQCA1LA6NCM1 817 aa5.49□□□□□ -1.53
SCARNA13-201ENST00000516672 TMEM31Q5JXX7 168 aa5.49□□□□□ -1.53
SCARNA13-201ENST00000516672 CST9Q5W186 159 aa5.49□□□□□ -1.53
SCARNA13-201ENST00000516672 PHF8Q9UPP1 1060 aa5.49□□□□□ -1.53
SCARNA13-201ENST00000516672 CCDC141Q6ZP82 1450 aa5.49□□□□□ -1.53
SCARNA13-201ENST00000516672 ADAMTSL1Q8N6G6 1762 aa5.49□□□□□ -1.53
SCARNA13-201ENST00000516672 SCN11AQ9UI33 1791 aa5.49□□□□□ -1.53
SCARNA13-201ENST00000516672 IRS2Q9Y4H2 1338 aa5.48□□□□□ -1.53
SCARNA13-201ENST00000516672 CFAP47Q6ZTR5 3102 aa5.48□□□□□ -1.53
SCARNA13-201ENST00000516672 ANKRD30BQ9BXX2 1392 aa5.48□□□□□ -1.53
SCARNA13-201ENST00000516672 HOXB3P14651 431 aaPredicted RBP5.48□□□□□ -1.53
SCARNA13-201ENST00000516672 NOGQ13253 232 aa5.48□□□□□ -1.53
SCARNA13-201ENST00000516672 NBPF1Q3BBV0 1214 aa5.48□□□□□ -1.53
SCARNA13-201ENST00000516672 FLAD1Q8NFF5 587 aa5.48□□□□□ -1.53
SCARNA13-201ENST00000516672 FAM161BQ96MY7 647 aa5.48□□□□□ -1.53
SCARNA13-201ENST00000516672 NAIPQ13075 1403 aa5.48□□□□□ -1.53
SCARNA13-201ENST00000516672 ERBB3P21860 1342 aa5.48□□□□□ -1.53
SCARNA13-201ENST00000516672 ALS2Q96Q42 1657 aa5.47□□□□□ -1.53
SCARNA13-201ENST00000516672 RGL2O15211 777 aa5.47□□□□□ -1.53
SCARNA13-201ENST00000516672 SAPCD2Q86UD0 394 aa5.47□□□□□ -1.53
SCARNA13-201ENST00000516672 SYNE4Q8N205 404 aa5.47□□□□□ -1.53
SCARNA13-201ENST00000516672 ADAMTS19Q8TE59 1207 aa5.47□□□□□ -1.53
SCARNA13-201ENST00000516672 CNTNAP3BQ96NU0 1288 aa5.47□□□□□ -1.53
SCARNA13-201ENST00000516672 UHRF1Q96T88 793 aaPredicted RBP5.47□□□□□ -1.53
SCARNA13-201ENST00000516672 CNTNAP3Q9BZ76 1288 aa5.47□□□□□ -1.53
SCARNA13-201ENST00000516672 CNTNAP4Q9C0A0 1308 aa5.47□□□□□ -1.53
SCARNA13-201ENST00000516672 BDP1A6H8Y1 2624 aa5.46□□□□□ -1.53
SCARNA13-201ENST00000516672 ZNF296Q8WUU4 475 aaPredicted RBP5.46□□□□□ -1.54
SCARNA13-201ENST00000516672 STAP2Q9UGK3 403 aa5.46□□□□□ -1.54
SCARNA13-201ENST00000516672 SLIT3O75094 1523 aa5.46□□□□□ -1.54
SCARNA13-201ENST00000516672 MAST4O15021 2626 aa5.46□□□□□ -1.54
SCARNA13-201ENST00000516672 YTHDC2Q9H6S0 1430 aaKnown RBP5.46□□□□□ -1.54
SCARNA13-201ENST00000516672 TRPM3Q9HCF6 1732 aaPredicted RBP5.45□□□□□ -1.54
SCARNA13-201ENST00000516672 CCNB3Q8WWL7 1395 aa5.45□□□□□ -1.54
SCARNA13-201ENST00000516672 CYSRT1A8MQ03 144 aa5.45□□□□□ -1.54
SCARNA13-201ENST00000516672 KRT38O76015 456 aa5.45□□□□□ -1.54
SCARNA13-201ENST00000516672 ZIC2O95409 532 aaPredicted RBP5.45□□□□□ -1.54
SCARNA13-201ENST00000516672 BCAMP50895 628 aa5.45□□□□□ -1.54
SCARNA13-201ENST00000516672 LRIT3Q3SXY7 679 aa5.45□□□□□ -1.54
SCARNA13-201ENST00000516672 SLC51AQ86UW1 340 aa5.45□□□□□ -1.54
SCARNA13-201ENST00000516672 HHIPL1Q96JK4 782 aa5.45□□□□□ -1.54
SCARNA13-201ENST00000516672 EPHX3Q9H6B9 360 aa5.45□□□□□ -1.54
SCARNA13-201ENST00000516672 WNK3Q9BYP7 1800 aa5.45□□□□□ -1.54
SCARNA13-201ENST00000516672 COL5A2P05997 1499 aaPredicted RBP5.45□□□□□ -1.54
SCARNA13-201ENST00000516672 CFAP54Q96N23 3096 aa5.44□□□□□ -1.54
SCARNA13-201ENST00000516672 USP34Q70CQ2 3546 aa5.44□□□□□ -1.54
SCARNA13-201ENST00000516672 LMO7Q8WWI1 1683 aa5.44□□□□□ -1.54
SCARNA13-201ENST00000516672 EPG5Q9HCE0 2579 aa5.44□□□□□ -1.54
SCARNA13-201ENST00000516672 EXOC5O00471 708 aa5.44□□□□□ -1.54
SCARNA13-201ENST00000516672 MMP10P09238 476 aa5.44□□□□□ -1.54
SCARNA13-201ENST00000516672 CCNL1Q9UK58 526 aaPredicted RBP5.44□□□□□ -1.54
SCARNA13-201ENST00000516672 ACEP12821 1306 aa5.44□□□□□ -1.54
SCARNA13-201ENST00000516672 TTC21AQ8NDW8 1320 aa5.44□□□□□ -1.54
SCARNA13-201ENST00000516672 SCN4AP35499 1836 aa5.44□□□□□ -1.54
SCARNA13-201ENST00000516672 ANKRD11Q6UB99 2663 aaPredicted RBP5.43□□□□□ -1.54
SCARNA13-201ENST00000516672 TRAF5O00463 557 aa5.43□□□□□ -1.54
SCARNA13-201ENST00000516672 ZBTB7BO15156 539 aaPredicted RBP5.43□□□□□ -1.54
SCARNA13-201ENST00000516672 ERFEQ4G0M1 354 aa5.43□□□□□ -1.54
SCARNA13-201ENST00000516672 TMEM106CQ9BVX2 250 aa5.43□□□□□ -1.54
SCARNA13-201ENST00000516672 C5orf42Q9H799 3197 aa5.43□□□□□ -1.54
SCARNA13-201ENST00000516672 CCDC88AQ3V6T2 1871 aa5.43□□□□□ -1.54
SCARNA13-201ENST00000516672 KANK1Q14678 1352 aa5.42□□□□□ -1.54
SCARNA13-201ENST00000516672 WTIPA6NIX2 430 aaPredicted RBP5.42□□□□□ -1.54
SCARNA13-201ENST00000516672 PHF14O94880 888 aa5.42□□□□□ -1.54
SCARNA13-201ENST00000516672 EPHX2P34913 555 aa5.42□□□□□ -1.54
SCARNA13-201ENST00000516672 KIF23Q02241 960 aaPredicted RBP5.42□□□□□ -1.54
SCARNA13-201ENST00000516672 L3MBTL3Q96JM7 780 aaPredicted RBP5.42□□□□□ -1.54
SCARNA13-201ENST00000516672 CDX2Q99626 313 aaPredicted RBP5.42□□□□□ -1.54
SCARNA13-201ENST00000516672 CCDC87Q9NVE4 849 aa5.42□□□□□ -1.54
SCARNA13-201ENST00000516672 NR2E3Q9Y5X4 410 aa5.42□□□□□ -1.54
SCARNA13-201ENST00000516672 LY75O60449 1722 aa5.42□□□□□ -1.54
SCARNA13-201ENST00000516672 GPR179Q6PRD1 2367 aa5.42□□□□□ -1.54
SCARNA13-201ENST00000516672 ZDBF2Q9HCK1 2354 aa5.42□□□□□ -1.54
SCARNA13-201ENST00000516672 HTTP42858 3142 aa5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 CHD6Q8TD26 2715 aa5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 TRPM7Q96QT4 1865 aa5.41□□□□□ -1.54
SCARNA13-201ENST00000516672 FAM86C2PA6NEL3 165 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms