RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 ZC3H6P61129 1189 aaKnown RBP6.7□□□□□ -1.34
RNU6-488P-201ENST00000515918 DSC3Q14574 896 aa6.7□□□□□ -1.34
RNU6-488P-201ENST00000515918 LHX8Q68G74 356 aa6.7□□□□□ -1.34
RNU6-488P-201ENST00000515918 KCTD12Q96CX2 325 aaKnown RBP6.7□□□□□ -1.34
RNU6-488P-201ENST00000515918 DRC1Q96MC2 740 aa6.7□□□□□ -1.34
RNU6-488P-201ENST00000515918 MAP4K5Q9Y4K4 846 aa6.7□□□□□ -1.34
RNU6-488P-201ENST00000515918 TNFRSF10BO14763 440 aa6.69□□□□□ -1.34
RNU6-488P-201ENST00000515918 FZD6O60353 706 aa6.69□□□□□ -1.34
RNU6-488P-201ENST00000515918 INHAP05111 366 aa6.69□□□□□ -1.34
RNU6-488P-201ENST00000515918 SKOR1P84550 965 aa6.69□□□□□ -1.34
RNU6-488P-201ENST00000515918 FOXK2Q01167 660 aa6.69□□□□□ -1.34
RNU6-488P-201ENST00000515918 FMR1Q06787 632 aaKnown RBP eCLIP6.69□□□□□ -1.34
RNU6-488P-201ENST00000515918 CC2D2BQ6DHV5 1058 aa6.69□□□□□ -1.34
RNU6-488P-201ENST00000515918 SREK1Q8WXA9 508 aaKnown RBP6.69□□□□□ -1.34
RNU6-488P-201ENST00000515918 TMPRSS4Q9NRS4 437 aa6.69□□□□□ -1.34
RNU6-488P-201ENST00000515918 RNF19AQ9NV58 838 aa6.69□□□□□ -1.34
RNU6-488P-201ENST00000515918 CCDC87Q9NVE4 849 aa6.69□□□□□ -1.34
RNU6-488P-201ENST00000515918 SERTAD1Q9UHV2 236 aa6.69□□□□□ -1.34
RNU6-488P-201ENST00000515918 PPEF1O14829 653 aaPredicted RBP6.68□□□□□ -1.34
RNU6-488P-201ENST00000515918 BACH1O14867 736 aa6.68□□□□□ -1.34
RNU6-488P-201ENST00000515918 HDLBPQ00341 1268 aaKnown RBP6.68□□□□□ -1.34
RNU6-488P-201ENST00000515918 NAALADL2Q58DX5 795 aa6.68□□□□□ -1.34
RNU6-488P-201ENST00000515918 COX20Q5RI15 118 aa6.68□□□□□ -1.34
RNU6-488P-201ENST00000515918 C16orf46Q6P387 395 aa6.68□□□□□ -1.34
RNU6-488P-201ENST00000515918 VASH1Q7L8A9 365 aaPredicted RBP6.68□□□□□ -1.34
RNU6-488P-201ENST00000515918 SLC4A9Q96Q91 983 aa6.68□□□□□ -1.34
RNU6-488P-201ENST00000515918 ETNK1Q9HBU6 452 aa6.68□□□□□ -1.34
RNU6-488P-201ENST00000515918 CYLDQ9NQC7 956 aa6.68□□□□□ -1.34
RNU6-488P-201ENST00000515918 NDUFB5O43674 189 aa6.67□□□□□ -1.34
RNU6-488P-201ENST00000515918 VARSP26640 1264 aaKnown RBP6.67□□□□□ -1.34
RNU6-488P-201ENST00000515918 EIF1AXP47813 144 aaKnown RBP6.67□□□□□ -1.34
RNU6-488P-201ENST00000515918 FAM26DQ5JW98 314 aa6.67□□□□□ -1.34
RNU6-488P-201ENST00000515918 TBCELQ5QJ74 424 aa6.67□□□□□ -1.34
RNU6-488P-201ENST00000515918 C9orf131Q5VYM1 1079 aa6.67□□□□□ -1.34
RNU6-488P-201ENST00000515918 CHMP7Q8WUX9 453 aaPredicted RBP6.67□□□□□ -1.34
RNU6-488P-201ENST00000515918 FAM161BQ96MY7 647 aa6.67□□□□□ -1.34
RNU6-488P-201ENST00000515918 BRPF3Q9ULD4 1205 aa6.67□□□□□ -1.34
RNU6-488P-201ENST00000515918 SCAMP3O14828 347 aaKnown RBP6.66□□□□□ -1.34
RNU6-488P-201ENST00000515918 LILRA1O75019 489 aa6.66□□□□□ -1.34
RNU6-488P-201ENST00000515918 ERCC5P28715 1186 aaPredicted RBP6.66□□□□□ -1.34
RNU6-488P-201ENST00000515918 GRM5P41594 1212 aa6.66□□□□□ -1.34
RNU6-488P-201ENST00000515918 PLCB3Q01970 1234 aa6.66□□□□□ -1.34
RNU6-488P-201ENST00000515918 TRIM32Q13049 653 aa6.66□□□□□ -1.34
RNU6-488P-201ENST00000515918 PLA2G2CQ5R387 149 aa6.66□□□□□ -1.34
RNU6-488P-201ENST00000515918 FAM177A1Q8N128 213 aaPredicted RBP6.66□□□□□ -1.34
RNU6-488P-201ENST00000515918 VTI1AQ96AJ9 217 aa6.66□□□□□ -1.34
RNU6-488P-201ENST00000515918 CITED4Q96RK1 184 aa6.66□□□□□ -1.34
RNU6-488P-201ENST00000515918 C2orf49Q9BVC5 232 aaPredicted RBP6.66□□□□□ -1.34
RNU6-488P-201ENST00000515918 ZBTB39O15060 712 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 GPR182O15218 404 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 PPP1R12BO60237 982 aaPredicted RBP6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 EHHADHQ08426 723 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 RAD51AP2Q09MP3 1159 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 SLC9A9Q8IVB4 645 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 STAG2Q8N3U4 1231 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 ZNF784Q8NCA9 323 aaPredicted RBP6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 PUS7Q96PZ0 661 aaKnown RBP6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 CDK15Q96Q40 435 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 FAM129BQ96TA1 746 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 ESF1Q9H501 851 aaKnown RBP6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 QTRT2Q9H974 415 aaKnown RBP6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 SCHIP1Q9P0W5 487 aaPredicted RBP6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 STIM2Q9P246 746 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 PARP2Q9UGN5 583 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 WWC3Q9ULE0 1092 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 LRFN2Q9ULH4 789 aa6.65□□□□□ -1.34
RNU6-488P-201ENST00000515918 LDHBP07195 334 aaKnown RBP6.64□□□□□ -1.35
RNU6-488P-201ENST00000515918 PTPN5P54829 565 aa6.64□□□□□ -1.35
RNU6-488P-201ENST00000515918 MTFR1Q15390 333 aa6.64□□□□□ -1.35
RNU6-488P-201ENST00000515918 METTL16Q86W50 562 aaKnown RBP6.64□□□□□ -1.35
RNU6-488P-201ENST00000515918 TMC1Q8TDI8 760 aa6.64□□□□□ -1.35
RNU6-488P-201ENST00000515918 SETDB2Q96T68 719 aa6.64□□□□□ -1.35
RNU6-488P-201ENST00000515918 DUSP9Q99956 384 aaKnown RBP6.64□□□□□ -1.35
RNU6-488P-201ENST00000515918 PRKD2Q9BZL6 878 aa6.64□□□□□ -1.35
RNU6-488P-201ENST00000515918 USP3Q9Y6I4 520 aa6.64□□□□□ -1.35
RNU6-488P-201ENST00000515918 A6NJY4 79 aa6.63□□□□□ -1.35
RNU6-488P-201ENST00000515918 PRPF40AO75400 957 aaKnown RBP6.63□□□□□ -1.35
RNU6-488P-201ENST00000515918 ADD1P35611 737 aaKnown RBP6.63□□□□□ -1.35
RNU6-488P-201ENST00000515918 MAPK8P45983 427 aa6.63□□□□□ -1.35
RNU6-488P-201ENST00000515918 WNT7BP56706 349 aa6.63□□□□□ -1.35
RNU6-488P-201ENST00000515918 ARID5BQ14865 1188 aa6.63□□□□□ -1.35
RNU6-488P-201ENST00000515918 TMC4Q7Z404 712 aa6.63□□□□□ -1.35
RNU6-488P-201ENST00000515918 PIK3R5Q8WYR1 880 aa6.63□□□□□ -1.35
RNU6-488P-201ENST00000515918 DMRTB1Q96MA1 342 aa6.63□□□□□ -1.35
RNU6-488P-201ENST00000515918 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.63□□□□□ -1.35
RNU6-488P-201ENST00000515918 RNF223E7ERA6 249 aa6.62□□□□□ -1.35
RNU6-488P-201ENST00000515918 GNRH1P01148 92 aa6.62□□□□□ -1.35
RNU6-488P-201ENST00000515918 FSHRP23945 695 aa6.62□□□□□ -1.35
RNU6-488P-201ENST00000515918 SMTNP53814 917 aa6.62□□□□□ -1.35
RNU6-488P-201ENST00000515918 DAB2P98082 770 aa6.62□□□□□ -1.35
RNU6-488P-201ENST00000515918 AAMPQ13685 434 aa6.62□□□□□ -1.35
RNU6-488P-201ENST00000515918 ALKBH2Q6NS38 261 aa6.62□□□□□ -1.35
RNU6-488P-201ENST00000515918 POTEAQ6S8J7 498 aa6.62□□□□□ -1.35
RNU6-488P-201ENST00000515918 ATCAYQ86WG3 371 aa6.62□□□□□ -1.35
RNU6-488P-201ENST00000515918 MYO19Q96H55 970 aa6.62□□□□□ -1.35
RNU6-488P-201ENST00000515918 BCL11AQ9H165 835 aa6.62□□□□□ -1.35
RNU6-488P-201ENST00000515918 PPP1R1BQ9UD71 204 aaPredicted RBP6.62□□□□□ -1.35
RNU6-488P-201ENST00000515918 ZBTB24O43167 697 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms