RNA–Protein interactions for RNA: ENST00000515838.2

RBM4-209, Transcript of RNA binding motif protein 4, humanhuman

TSL 2

Gene RBM4, Length 943 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM4-209ENST00000515838 ATG3Q9NT62 314 aa20.24■□□□□ 0.83
RBM4-209ENST00000515838 KDM6AO15550 1401 aaPredicted RBP20.23■□□□□ 0.83
RBM4-209ENST00000515838 MTHFSP49914 203 aa20.23■□□□□ 0.83
RBM4-209ENST00000515838 SCN11AQ9UI33 1791 aa20.22■□□□□ 0.83
RBM4-209ENST00000515838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.22■□□□□ 0.83
RBM4-209ENST00000515838 CABP4P57796 275 aa20.22■□□□□ 0.83
RBM4-209ENST00000515838 AEBP1Q8IUX7 1158 aa20.22■□□□□ 0.83
RBM4-209ENST00000515838 CD2APQ9Y5K6 639 aa20.22■□□□□ 0.83
RBM4-209ENST00000515838 GOLGB1Q14789 3259 aaKnown RBP20.21■□□□□ 0.83
RBM4-209ENST00000515838 KLHL34Q8N239 644 aa20.21■□□□□ 0.83
RBM4-209ENST00000515838 LINC00116Q8NCU8 138 aa20.21■□□□□ 0.83
RBM4-209ENST00000515838 COL5A3P25940 1745 aaPredicted RBP20.21■□□□□ 0.83
RBM4-209ENST00000515838 CICQ96RK0 1608 aaPredicted RBP20.2■□□□□ 0.82
RBM4-209ENST00000515838 GPR162Q16538 588 aa20.2■□□□□ 0.82
RBM4-209ENST00000515838 RC3H1Q5TC82 1133 aaKnown RBP20.2■□□□□ 0.82
RBM4-209ENST00000515838 GNPATO15228 680 aa20.19■□□□□ 0.82
RBM4-209ENST00000515838 ADRA2BP18089 450 aa20.19■□□□□ 0.82
RBM4-209ENST00000515838 ITPK1Q13572 414 aa20.19■□□□□ 0.82
RBM4-209ENST00000515838 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
RBM4-209ENST00000515838 DIAPH1O60610 1272 aaKnown RBP20.18■□□□□ 0.82
RBM4-209ENST00000515838 CNTNAP4Q9C0A0 1308 aa20.18■□□□□ 0.82
RBM4-209ENST00000515838 GRIN3BO60391 1043 aa20.17■□□□□ 0.82
RBM4-209ENST00000515838 PHF14O94880 888 aa20.17■□□□□ 0.82
RBM4-209ENST00000515838 CC2D1BQ5T0F9 858 aaKnown RBP20.17■□□□□ 0.82
RBM4-209ENST00000515838 MSL1Q68DK7 614 aa20.17■□□□□ 0.82
RBM4-209ENST00000515838 RTCBQ9Y3I0 505 aaKnown RBP20.17■□□□□ 0.82
RBM4-209ENST00000515838 RBM42Q9BTD8 480 aaKnown RBP20.16■□□□□ 0.82
RBM4-209ENST00000515838 MRC1P22897 1456 aa20.15■□□□□ 0.82
RBM4-209ENST00000515838 VIRMAQ69YN4 1812 aaKnown RBP20.15■□□□□ 0.82
RBM4-209ENST00000515838 TRAPPC3LQ5T215 181 aa20.14■□□□□ 0.81
RBM4-209ENST00000515838 NFATC2IPQ8NCF5 419 aa20.14■□□□□ 0.81
RBM4-209ENST00000515838 NLGN2Q8NFZ4 835 aa20.14■□□□□ 0.81
RBM4-209ENST00000515838 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
RBM4-209ENST00000515838 AMIGO3Q86WK7 504 aa20.13■□□□□ 0.81
RBM4-209ENST00000515838 COL3A1P02461 1466 aaPredicted RBP20.12■□□□□ 0.81
RBM4-209ENST00000515838 NLGN1Q8N2Q7 840 aa20.12■□□□□ 0.81
RBM4-209ENST00000515838 SLC4A9Q96Q91 983 aa20.12■□□□□ 0.81
RBM4-209ENST00000515838 RPS6KA4O75676 772 aa20.11■□□□□ 0.81
RBM4-209ENST00000515838 SLC52A2Q9HAB3 445 aa20.11■□□□□ 0.81
RBM4-209ENST00000515838 MYH14Q7Z406 1995 aaKnown RBP20.11■□□□□ 0.81
RBM4-209ENST00000515838 HMOX1P09601 288 aa20.1■□□□□ 0.81
RBM4-209ENST00000515838 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
RBM4-209ENST00000515838 ZNF784Q8NCA9 323 aaPredicted RBP20.1■□□□□ 0.81
RBM4-209ENST00000515838 CFAP53Q96M91 514 aa20.1■□□□□ 0.81
RBM4-209ENST00000515838 KIF13BQ9NQT8 1826 aa20.09■□□□□ 0.81
RBM4-209ENST00000515838 TJP1Q07157 1748 aa20.09■□□□□ 0.81
RBM4-209ENST00000515838 C4AP0C0L4 1744 aa20.08■□□□□ 0.81
RBM4-209ENST00000515838 RNMTO43148 476 aaKnown RBP20.08■□□□□ 0.81
RBM4-209ENST00000515838 PTCD1O75127 700 aaKnown RBP20.08■□□□□ 0.81
RBM4-209ENST00000515838 RFC4P35249 363 aa20.08■□□□□ 0.81
RBM4-209ENST00000515838 GAS2L2Q8NHY3 880 aa20.07■□□□□ 0.8
RBM4-209ENST00000515838 MMP10P09238 476 aa20.06■□□□□ 0.8
RBM4-209ENST00000515838 CRKLP46109 303 aaKnown RBP20.06■□□□□ 0.8
RBM4-209ENST00000515838 MTHFSDQ2M296 383 aaKnown RBP20.06■□□□□ 0.8
RBM4-209ENST00000515838 ARHGEF1Q92888 912 aaKnown RBP20.06■□□□□ 0.8
RBM4-209ENST00000515838 U2SURPO15042 1029 aaKnown RBP20.05■□□□□ 0.8
RBM4-209ENST00000515838 YBX3P16989 372 aaKnown RBP eCLIP20.05■□□□□ 0.8
RBM4-209ENST00000515838 VSIG10Q8N0Z9 540 aa20.05■□□□□ 0.8
RBM4-209ENST00000515838 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
RBM4-209ENST00000515838 UBR2Q8IWV8 1755 aa20.04■□□□□ 0.8
RBM4-209ENST00000515838 GYS1P13807 737 aa20.03■□□□□ 0.8
RBM4-209ENST00000515838 TGFB2P61812 414 aa20.03■□□□□ 0.8
RBM4-209ENST00000515838 SMIM5Q71RC9 77 aa20.03■□□□□ 0.8
RBM4-209ENST00000515838 LGR6Q9HBX8 967 aa20.03■□□□□ 0.8
RBM4-209ENST00000515838 GNAT3A8MTJ3 354 aa20.02■□□□□ 0.8
RBM4-209ENST00000515838 CCDC87Q9NVE4 849 aa20.02■□□□□ 0.8
RBM4-209ENST00000515838 KCPQ6ZWJ8 1503 aa20.02■□□□□ 0.79
RBM4-209ENST00000515838 C10orf71Q711Q0 1435 aa20.02■□□□□ 0.79
RBM4-209ENST00000515838 PARP3Q9Y6F1 533 aa20.01■□□□□ 0.79
RBM4-209ENST00000515838 USP42Q9H9J4 1324 aaKnown RBP20.01■□□□□ 0.79
RBM4-209ENST00000515838 TEFQ10587 303 aa20■□□□□ 0.79
RBM4-209ENST00000515838 TTC5Q8N0Z6 440 aa20■□□□□ 0.79
RBM4-209ENST00000515838 SIPA1L3O60292 1781 aaPredicted RBP20■□□□□ 0.79
RBM4-209ENST00000515838 INTS5Q6P9B9 1019 aaKnown RBP19.99■□□□□ 0.79
RBM4-209ENST00000515838 TEX13AQ9BXU3 409 aaPredicted RBP19.98■□□□□ 0.79
RBM4-209ENST00000515838 PXDNLA1KZ92 1463 aa19.98■□□□□ 0.79
RBM4-209ENST00000515838 KIAA1551Q9HCM1 1747 aa19.97■□□□□ 0.79
RBM4-209ENST00000515838 ZPR1O75312 459 aa19.97■□□□□ 0.79
RBM4-209ENST00000515838 CYP19A1P11511 503 aaPredicted RBP19.97■□□□□ 0.79
RBM4-209ENST00000515838 PPP2R1AP30153 589 aa19.97■□□□□ 0.79
RBM4-209ENST00000515838 CNGB1Q14028 1251 aaPredicted RBP19.97■□□□□ 0.79
RBM4-209ENST00000515838 DNAJC10Q8IXB1 793 aa19.97■□□□□ 0.79
RBM4-209ENST00000515838 SOS1Q07889 1333 aaPredicted RBP19.97■□□□□ 0.79
RBM4-209ENST00000515838 CEMIPQ8WUJ3 1361 aa19.96■□□□□ 0.79
RBM4-209ENST00000515838 FCHSD2O94868 740 aa19.96■□□□□ 0.79
RBM4-209ENST00000515838 STARD3NLO95772 234 aa19.96■□□□□ 0.79
RBM4-209ENST00000515838 SLC39A6Q13433 755 aa19.96■□□□□ 0.79
RBM4-209ENST00000515838 RSPH6AQ9H0K4 717 aa19.96■□□□□ 0.79
RBM4-209ENST00000515838 BRCA1P38398 1863 aaKnown RBP19.95■□□□□ 0.78
RBM4-209ENST00000515838 PRKAR2BP31323 418 aa19.95■□□□□ 0.78
RBM4-209ENST00000515838 COL15A1P39059 1388 aa19.95■□□□□ 0.78
RBM4-209ENST00000515838 ZNF790Q6PG37 636 aa19.94■□□□□ 0.78
RBM4-209ENST00000515838 IL17REQ8NFR9 667 aa19.94■□□□□ 0.78
RBM4-209ENST00000515838 N4BP2Q86UW6 1770 aaPredicted RBP19.93■□□□□ 0.78
RBM4-209ENST00000515838 U2AF1L5P0DN76 240 aaPredicted RBP19.93■□□□□ 0.78
RBM4-209ENST00000515838 U2AF1Q01081 240 aaKnown RBP eCLIP19.93■□□□□ 0.78
RBM4-209ENST00000515838 NARFQ9UHQ1 456 aa19.93■□□□□ 0.78
RBM4-209ENST00000515838 ADCY9O60503 1353 aa19.93■□□□□ 0.78
RBM4-209ENST00000515838 A0A087WZG4 1122 aa19.92■□□□□ 0.78
RBM4-209ENST00000515838 GIGYF1O75420 1035 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms