RNA–Protein interactions for RNA: ENST00000515809.1

RBM47-215, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 229 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-215ENST00000515809 LGR6Q9HBX8 967 aa18.59■□□□□ 0.57
RBM47-215ENST00000515809 ZNF831Q5JPB2 1677 aa18.58■□□□□ 0.57
RBM47-215ENST00000515809 DCTN1Q14203 1278 aa18.58■□□□□ 0.56
RBM47-215ENST00000515809 CCDC125Q86Z20 511 aa18.58■□□□□ 0.56
RBM47-215ENST00000515809 IL17REQ8NFR9 667 aa18.58■□□□□ 0.56
RBM47-215ENST00000515809 RREB1Q92766 1687 aa18.57■□□□□ 0.56
RBM47-215ENST00000515809 CICQ96RK0 1608 aaPredicted RBP18.57■□□□□ 0.56
RBM47-215ENST00000515809 KCNQ2O43526 872 aa18.57■□□□□ 0.56
RBM47-215ENST00000515809 TRIM35Q9UPQ4 493 aa18.57■□□□□ 0.56
RBM47-215ENST00000515809 LAMB4A4D0S4 1761 aa18.55■□□□□ 0.56
RBM47-215ENST00000515809 C5P01031 1676 aa18.55■□□□□ 0.56
RBM47-215ENST00000515809 NFATC2IPQ8NCF5 419 aa18.55■□□□□ 0.56
RBM47-215ENST00000515809 PIGBQ92521 554 aa18.55■□□□□ 0.56
RBM47-215ENST00000515809 SMARCC1Q92922 1105 aaPredicted RBP18.55■□□□□ 0.56
RBM47-215ENST00000515809 TAF1LQ8IZX4 1826 aa18.54■□□□□ 0.56
RBM47-215ENST00000515809 BAG6P46379 1132 aa18.54■□□□□ 0.56
RBM47-215ENST00000515809 HNRNPUQ00839 825 aaKnown RBP eCLIP18.54■□□□□ 0.56
RBM47-215ENST00000515809 TTC5Q8N0Z6 440 aa18.54■□□□□ 0.56
RBM47-215ENST00000515809 THUMPD2Q9BTF0 503 aaKnown RBP18.54■□□□□ 0.56
RBM47-215ENST00000515809 SALL2Q9Y467 1007 aaPredicted RBP18.54■□□□□ 0.56
RBM47-215ENST00000515809 PALLDQ8WX93 1383 aa18.54■□□□□ 0.56
RBM47-215ENST00000515809 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
RBM47-215ENST00000515809 BTBD11A6QL63 1104 aa18.53■□□□□ 0.56
RBM47-215ENST00000515809 APBA3O96018 575 aa18.53■□□□□ 0.56
RBM47-215ENST00000515809 WWC1Q8IX03 1113 aa18.53■□□□□ 0.56
RBM47-215ENST00000515809 KCPQ6ZWJ8 1503 aa18.53■□□□□ 0.56
RBM47-215ENST00000515809 TJP1Q07157 1748 aa18.52■□□□□ 0.56
RBM47-215ENST00000515809 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.56
RBM47-215ENST00000515809 TAF7Q15545 349 aaPredicted RBP18.52■□□□□ 0.56
RBM47-215ENST00000515809 COL5A3P25940 1745 aaPredicted RBP18.52■□□□□ 0.55
RBM47-215ENST00000515809 PTF1AQ7RTS3 328 aa18.51■□□□□ 0.55
RBM47-215ENST00000515809 UPF1Q92900 1129 aaKnown RBP eCLIP18.51■□□□□ 0.55
RBM47-215ENST00000515809 BABAM1Q9NWV8 329 aa18.51■□□□□ 0.55
RBM47-215ENST00000515809 IL16Q14005 1332 aa18.5■□□□□ 0.55
RBM47-215ENST00000515809 GNAI1P63096 354 aa18.5■□□□□ 0.55
RBM47-215ENST00000515809 WDR63Q8IWG1 891 aa18.5■□□□□ 0.55
RBM47-215ENST00000515809 IFT57Q9NWB7 429 aa18.5■□□□□ 0.55
RBM47-215ENST00000515809 PLSCR1O15162 318 aa18.49■□□□□ 0.55
RBM47-215ENST00000515809 TSPYL4Q9UJ04 414 aa18.49■□□□□ 0.55
RBM47-215ENST00000515809 ASAP1Q9ULH1 1129 aa18.49■□□□□ 0.55
RBM47-215ENST00000515809 LAS1LQ9Y4W2 734 aaKnown RBP18.49■□□□□ 0.55
RBM47-215ENST00000515809 ZNF790Q6PG37 636 aa18.48■□□□□ 0.55
RBM47-215ENST00000515809 CFAP44Q96MT7 982 aa18.48■□□□□ 0.55
RBM47-215ENST00000515809 ATG3Q9NT62 314 aa18.48■□□□□ 0.55
RBM47-215ENST00000515809 HMGB2P26583 209 aaKnown RBP18.47■□□□□ 0.55
RBM47-215ENST00000515809 ZBED9Q6R2W3 1325 aa18.47■□□□□ 0.55
RBM47-215ENST00000515809 ZNF521Q96K83 1311 aa18.47■□□□□ 0.55
RBM47-215ENST00000515809 SLC39A6Q13433 755 aa18.46■□□□□ 0.55
RBM47-215ENST00000515809 SLC27A3Q5K4L6 730 aa18.46■□□□□ 0.55
RBM47-215ENST00000515809 FMNL2Q96PY5 1086 aa18.46■□□□□ 0.55
RBM47-215ENST00000515809 MYH16Q9H6N6 1097 aa18.46■□□□□ 0.55
RBM47-215ENST00000515809 C4BP0C0L5 1744 aa18.46■□□□□ 0.55
RBM47-215ENST00000515809 GOLGA2Q08379 1002 aa18.45■□□□□ 0.54
RBM47-215ENST00000515809 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
RBM47-215ENST00000515809 CCNL1Q9UK58 526 aaPredicted RBP18.45■□□□□ 0.54
RBM47-215ENST00000515809 LOC102724428A0A0B4J2F2 783 aa18.44■□□□□ 0.54
RBM47-215ENST00000515809 CHL1O00533 1208 aa18.44■□□□□ 0.54
RBM47-215ENST00000515809 PTCD1O75127 700 aaKnown RBP18.44■□□□□ 0.54
RBM47-215ENST00000515809 SIK1P57059 783 aa18.44■□□□□ 0.54
RBM47-215ENST00000515809 HEG1Q9ULI3 1381 aa18.43■□□□□ 0.54
RBM47-215ENST00000515809 ZNF853P0CG23 659 aa18.43■□□□□ 0.54
RBM47-215ENST00000515809 EN1Q05925 392 aaPredicted RBP18.43■□□□□ 0.54
RBM47-215ENST00000515809 DEFB132Q7Z7B7 95 aa18.43■□□□□ 0.54
RBM47-215ENST00000515809 MBIPQ9NS73 344 aa18.43■□□□□ 0.54
RBM47-215ENST00000515809 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
RBM47-215ENST00000515809 QSER1Q2KHR3 1735 aa18.43■□□□□ 0.54
RBM47-215ENST00000515809 E9PSI1 815 aa18.42■□□□□ 0.54
RBM47-215ENST00000515809 TXNRD1Q16881 649 aa18.42■□□□□ 0.54
RBM47-215ENST00000515809 VSIG10Q8N0Z9 540 aa18.42■□□□□ 0.54
RBM47-215ENST00000515809 CAMKK2Q96RR4 588 aa18.42■□□□□ 0.54
RBM47-215ENST00000515809 ATP6V1AP38606 617 aa18.41■□□□□ 0.54
RBM47-215ENST00000515809 EZH2Q15910 746 aaKnown RBP18.41■□□□□ 0.54
RBM47-215ENST00000515809 ZNF496Q96IT1 587 aaPredicted RBP18.41■□□□□ 0.54
RBM47-215ENST00000515809 TUBGCP6Q96RT7 1819 aa18.41■□□□□ 0.54
RBM47-215ENST00000515809 FANCIQ9NVI1 1328 aa18.41■□□□□ 0.54
RBM47-215ENST00000515809 SOCS7O14512 581 aa18.4■□□□□ 0.54
RBM47-215ENST00000515809 KCNQ3O43525 872 aa18.4■□□□□ 0.54
RBM47-215ENST00000515809 UBR3Q6ZT12 1888 aa18.39■□□□□ 0.54
RBM47-215ENST00000515809 EIF4A1P60842 406 aaKnown RBP18.39■□□□□ 0.53
RBM47-215ENST00000515809 TSR2Q969E8 191 aaKnown RBP18.39■□□□□ 0.53
RBM47-215ENST00000515809 TEX13AQ9BXU3 409 aaPredicted RBP18.39■□□□□ 0.53
RBM47-215ENST00000515809 SNRPA1P09661 255 aaKnown RBP18.38■□□□□ 0.53
RBM47-215ENST00000515809 YTHDC1Q96MU7 727 aaKnown RBP18.38■□□□□ 0.53
RBM47-215ENST00000515809 CACNA1FO60840 1977 aa18.38■□□□□ 0.53
RBM47-215ENST00000515809 SOS1Q07889 1333 aaPredicted RBP18.37■□□□□ 0.53
RBM47-215ENST00000515809 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
RBM47-215ENST00000515809 HOXB7P09629 217 aa18.36■□□□□ 0.53
RBM47-215ENST00000515809 C4AP0C0L4 1744 aa18.35■□□□□ 0.53
RBM47-215ENST00000515809 CNTNAP4Q9C0A0 1308 aa18.35■□□□□ 0.53
RBM47-215ENST00000515809 STARD3NLO95772 234 aa18.35■□□□□ 0.53
RBM47-215ENST00000515809 SLFN5Q08AF3 891 aa18.35■□□□□ 0.53
RBM47-215ENST00000515809 ITPK1Q13572 414 aa18.35■□□□□ 0.53
RBM47-215ENST00000515809 DNAJC10Q8IXB1 793 aa18.35■□□□□ 0.53
RBM47-215ENST00000515809 SLC4A9Q96Q91 983 aa18.35■□□□□ 0.53
RBM47-215ENST00000515809 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
RBM47-215ENST00000515809 LRRC4BQ9NT99 713 aa18.35■□□□□ 0.53
RBM47-215ENST00000515809 GIGYF1O75420 1035 aaPredicted RBP18.34■□□□□ 0.53
RBM47-215ENST00000515809 KCNQ4P56696 695 aa18.34■□□□□ 0.53
RBM47-215ENST00000515809 PROM2Q8N271 834 aa18.34■□□□□ 0.53
RBM47-215ENST00000515809 AK7Q96M32 723 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms