RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 SMIM5Q71RC9 77 aa24■■□□□ 1.43
SFXN1-212ENST00000515791 FLAD1Q8NFF5 587 aa23.99■■□□□ 1.43
SFXN1-212ENST00000515791 SCN11AQ9UI33 1791 aa23.98■■□□□ 1.43
SFXN1-212ENST00000515791 POLD1P28340 1107 aa23.98■■□□□ 1.43
SFXN1-212ENST00000515791 DIAPH1O60610 1272 aaKnown RBP23.97■■□□□ 1.43
SFXN1-212ENST00000515791 ATP6V1AP38606 617 aa23.97■■□□□ 1.43
SFXN1-212ENST00000515791 AK7Q96M32 723 aa23.97■■□□□ 1.43
SFXN1-212ENST00000515791 GOLGB1Q14789 3259 aaKnown RBP23.97■■□□□ 1.43
SFXN1-212ENST00000515791 MSH5O43196 834 aa23.96■■□□□ 1.43
SFXN1-212ENST00000515791 HMOX1P09601 288 aa23.96■■□□□ 1.43
SFXN1-212ENST00000515791 COL5A3P25940 1745 aaPredicted RBP23.96■■□□□ 1.43
SFXN1-212ENST00000515791 CABP4P57796 275 aa23.95■■□□□ 1.42
SFXN1-212ENST00000515791 C1orf141Q5JVX7 400 aa23.95■■□□□ 1.42
SFXN1-212ENST00000515791 MSL1Q68DK7 614 aa23.95■■□□□ 1.42
SFXN1-212ENST00000515791 ADAMTS7Q9UKP4 1686 aa23.95■■□□□ 1.42
SFXN1-212ENST00000515791 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.94■■□□□ 1.42
SFXN1-212ENST00000515791 SSFA2P28290 1259 aa23.94■■□□□ 1.42
SFXN1-212ENST00000515791 AKAP4Q5JQC9 854 aa23.94■■□□□ 1.42
SFXN1-212ENST00000515791 NFATC2IPQ8NCF5 419 aa23.94■■□□□ 1.42
SFXN1-212ENST00000515791 DCAF8L1A6NGE4 600 aa23.92■■□□□ 1.42
SFXN1-212ENST00000515791 CNGB1Q14028 1251 aaPredicted RBP23.92■■□□□ 1.42
SFXN1-212ENST00000515791 MTHFSDQ2M296 383 aaKnown RBP23.92■■□□□ 1.42
SFXN1-212ENST00000515791 NLGN2Q8NFZ4 835 aa23.92■■□□□ 1.42
SFXN1-212ENST00000515791 LGR6Q9HBX8 967 aa23.92■■□□□ 1.42
SFXN1-212ENST00000515791 MRC1P22897 1456 aa23.92■■□□□ 1.42
SFXN1-212ENST00000515791 CICQ96RK0 1608 aaPredicted RBP23.92■■□□□ 1.42
SFXN1-212ENST00000515791 PHF14O94880 888 aa23.91■■□□□ 1.42
SFXN1-212ENST00000515791 YY1P25490 414 aa23.91■■□□□ 1.42
SFXN1-212ENST00000515791 VIRMAQ69YN4 1812 aaKnown RBP23.91■■□□□ 1.42
SFXN1-212ENST00000515791 RBM42Q9BTD8 480 aaKnown RBP23.9■■□□□ 1.42
SFXN1-212ENST00000515791 GNPATO15228 680 aa23.89■■□□□ 1.41
SFXN1-212ENST00000515791 MYH14Q7Z406 1995 aaKnown RBP23.89■■□□□ 1.41
SFXN1-212ENST00000515791 TJP1Q07157 1748 aa23.88■■□□□ 1.41
SFXN1-212ENST00000515791 RC3H1Q5TC82 1133 aaKnown RBP23.88■■□□□ 1.41
SFXN1-212ENST00000515791 CNTNAP4Q9C0A0 1308 aa23.87■■□□□ 1.41
SFXN1-212ENST00000515791 RNMTO43148 476 aaKnown RBP23.87■■□□□ 1.41
SFXN1-212ENST00000515791 SLC52A2Q9HAB3 445 aa23.87■■□□□ 1.41
SFXN1-212ENST00000515791 KLHL34Q8N239 644 aa23.86■■□□□ 1.41
SFXN1-212ENST00000515791 PTCD1O75127 700 aaKnown RBP23.85■■□□□ 1.41
SFXN1-212ENST00000515791 PPP2R1AP30153 589 aa23.84■■□□□ 1.41
SFXN1-212ENST00000515791 U2SURPO15042 1029 aaKnown RBP23.83■■□□□ 1.41
SFXN1-212ENST00000515791 RPS6KA4O75676 772 aa23.82■■□□□ 1.4
SFXN1-212ENST00000515791 ARHGEF1Q92888 912 aaKnown RBP23.82■■□□□ 1.4
SFXN1-212ENST00000515791 RTCBQ9Y3I0 505 aaKnown RBP23.82■■□□□ 1.4
SFXN1-212ENST00000515791 CD2APQ9Y5K6 639 aa23.82■■□□□ 1.4
SFXN1-212ENST00000515791 KCPQ6ZWJ8 1503 aa23.82■■□□□ 1.4
SFXN1-212ENST00000515791 CHD4Q14839 1912 aa23.81■■□□□ 1.4
SFXN1-212ENST00000515791 C4AP0C0L4 1744 aa23.81■■□□□ 1.4
SFXN1-212ENST00000515791 ADRA2BP18089 450 aa23.8■■□□□ 1.4
SFXN1-212ENST00000515791 TRAPPC3LQ5T215 181 aa23.8■■□□□ 1.4
SFXN1-212ENST00000515791 RSPH6AQ9H0K4 717 aa23.8■■□□□ 1.4
SFXN1-212ENST00000515791 UBR2Q8IWV8 1755 aa23.79■■□□□ 1.4
SFXN1-212ENST00000515791 CRKLP46109 303 aaKnown RBP23.79■■□□□ 1.4
SFXN1-212ENST00000515791 SLC39A6Q13433 755 aa23.79■■□□□ 1.4
SFXN1-212ENST00000515791 GPR162Q16538 588 aa23.79■■□□□ 1.4
SFXN1-212ENST00000515791 IL17REQ8NFR9 667 aa23.79■■□□□ 1.4
SFXN1-212ENST00000515791 PHACTR3Q96KR7 559 aa23.79■■□□□ 1.4
SFXN1-212ENST00000515791 SIPA1L3O60292 1781 aaPredicted RBP23.78■■□□□ 1.4
SFXN1-212ENST00000515791 YBX3P16989 372 aaKnown RBP eCLIP23.78■■□□□ 1.4
SFXN1-212ENST00000515791 INTS5Q6P9B9 1019 aaKnown RBP23.78■■□□□ 1.4
SFXN1-212ENST00000515791 GYS1P13807 737 aa23.77■■□□□ 1.4
SFXN1-212ENST00000515791 DNAJC10Q8IXB1 793 aa23.76■■□□□ 1.39
SFXN1-212ENST00000515791 CFAP53Q96M91 514 aa23.76■■□□□ 1.39
SFXN1-212ENST00000515791 GAS2L2Q8NHY3 880 aa23.75■■□□□ 1.39
SFXN1-212ENST00000515791 KIF13BQ9NQT8 1826 aa23.75■■□□□ 1.39
SFXN1-212ENST00000515791 KIAA1551Q9HCM1 1747 aa23.74■■□□□ 1.39
SFXN1-212ENST00000515791 GNAT3A8MTJ3 354 aa23.74■■□□□ 1.39
SFXN1-212ENST00000515791 MMP10P09238 476 aa23.74■■□□□ 1.39
SFXN1-212ENST00000515791 CYP19A1P11511 503 aaPredicted RBP23.74■■□□□ 1.39
SFXN1-212ENST00000515791 PRKAR2BP31323 418 aa23.74■■□□□ 1.39
SFXN1-212ENST00000515791 CEMIPQ8WUJ3 1361 aa23.74■■□□□ 1.39
SFXN1-212ENST00000515791 NLGN1Q8N2Q7 840 aa23.73■■□□□ 1.39
SFXN1-212ENST00000515791 RFC4P35249 363 aa23.71■■□□□ 1.39
SFXN1-212ENST00000515791 PELP1Q8IZL8 1130 aaKnown RBP23.71■■□□□ 1.39
SFXN1-212ENST00000515791 VSIG10Q8N0Z9 540 aa23.71■■□□□ 1.39
SFXN1-212ENST00000515791 ZNF784Q8NCA9 323 aaPredicted RBP23.71■■□□□ 1.39
SFXN1-212ENST00000515791 USP42Q9H9J4 1324 aaKnown RBP23.7■■□□□ 1.38
SFXN1-212ENST00000515791 CCDC87Q9NVE4 849 aa23.7■■□□□ 1.38
SFXN1-212ENST00000515791 SRP68Q9UHB9 627 aaKnown RBP23.7■■□□□ 1.38
SFXN1-212ENST00000515791 NUDCQ9Y266 331 aa23.7■■□□□ 1.38
SFXN1-212ENST00000515791 SOS1Q07889 1333 aaPredicted RBP23.69■■□□□ 1.38
SFXN1-212ENST00000515791 FCHSD2O94868 740 aa23.69■■□□□ 1.38
SFXN1-212ENST00000515791 U2AF1L5P0DN76 240 aaPredicted RBP23.69■■□□□ 1.38
SFXN1-212ENST00000515791 U2AF1Q01081 240 aaKnown RBP eCLIP23.69■■□□□ 1.38
SFXN1-212ENST00000515791 C10orf71Q711Q0 1435 aa23.68■■□□□ 1.38
SFXN1-212ENST00000515791 GRIN3BO60391 1043 aa23.68■■□□□ 1.38
SFXN1-212ENST00000515791 FKBP8Q14318 412 aa23.67■■□□□ 1.38
SFXN1-212ENST00000515791 ZNF790Q6PG37 636 aa23.67■■□□□ 1.38
SFXN1-212ENST00000515791 PXDNLA1KZ92 1463 aa23.67■■□□□ 1.38
SFXN1-212ENST00000515791 TEFQ10587 303 aa23.66■■□□□ 1.38
SFXN1-212ENST00000515791 ZNF496Q96IT1 587 aaPredicted RBP23.66■■□□□ 1.38
SFXN1-212ENST00000515791 ZBTB1Q9Y2K1 713 aa23.66■■□□□ 1.38
SFXN1-212ENST00000515791 HEG1Q9ULI3 1381 aa23.64■■□□□ 1.37
SFXN1-212ENST00000515791 N4BP2Q86UW6 1770 aaPredicted RBP23.63■■□□□ 1.37
SFXN1-212ENST00000515791 TM4SF1P30408 202 aa23.63■■□□□ 1.37
SFXN1-212ENST00000515791 DDR1Q08345 913 aa23.63■■□□□ 1.37
SFXN1-212ENST00000515791 KCNQ3O43525 872 aa23.62■■□□□ 1.37
SFXN1-212ENST00000515791 TGFB2P61812 414 aa23.62■■□□□ 1.37
SFXN1-212ENST00000515791 TTC5Q8N0Z6 440 aa23.62■■□□□ 1.37
SFXN1-212ENST00000515791 COL15A1P39059 1388 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms