RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 BEND7Q8N7W2 519 aaPredicted RBP7.32□□□□□ -1.24
HERC4-215ENST00000515753 DCAF5Q96JK2 942 aa7.32□□□□□ -1.24
HERC4-215ENST00000515753 TBC1D2BQ9UPU7 963 aa7.32□□□□□ -1.24
HERC4-215ENST00000515753 FOXK2Q01167 660 aa7.31□□□□□ -1.24
HERC4-215ENST00000515753 PLA2G4EQ3MJ16 856 aa7.31□□□□□ -1.24
HERC4-215ENST00000515753 TMEM214Q6NUQ4 689 aaKnown RBP7.31□□□□□ -1.24
HERC4-215ENST00000515753 PODNQ7Z5L7 613 aa7.31□□□□□ -1.24
HERC4-215ENST00000515753 RUBCNLQ9H714 662 aa7.31□□□□□ -1.24
HERC4-215ENST00000515753 NSFL1CQ9UNZ2 370 aaKnown RBP7.31□□□□□ -1.24
HERC4-215ENST00000515753 HRH3Q9Y5N1 445 aa7.31□□□□□ -1.24
HERC4-215ENST00000515753 OIP5O43482 229 aa7.3□□□□□ -1.24
HERC4-215ENST00000515753 ITGB2P05107 769 aa7.3□□□□□ -1.24
HERC4-215ENST00000515753 C4orf17Q53FE4 359 aa7.3□□□□□ -1.24
HERC4-215ENST00000515753 XAGE2Q96GT9 111 aa7.3□□□□□ -1.24
HERC4-215ENST00000515753 OXCT2Q9BYC2 517 aaPredicted RBP7.3□□□□□ -1.24
HERC4-215ENST00000515753 FHDC1Q9C0D6 1143 aaPredicted RBP7.3□□□□□ -1.24
HERC4-215ENST00000515753 APBB1O00213 710 aa7.29□□□□□ -1.24
HERC4-215ENST00000515753 SOCS7O14512 581 aa7.29□□□□□ -1.24
HERC4-215ENST00000515753 SNRPNP63162 240 aaKnown RBP7.29□□□□□ -1.24
HERC4-215ENST00000515753 GNASQ5JWF2 1037 aa7.29□□□□□ -1.24
HERC4-215ENST00000515753 C1orf229Q6ZS94 237 aaPredicted RBP7.29□□□□□ -1.24
HERC4-215ENST00000515753 KLRG1Q96E93 195 aa7.29□□□□□ -1.24
HERC4-215ENST00000515753 A0A1B0GTH6 734 aa7.28□□□□□ -1.24
HERC4-215ENST00000515753 SHISA8B8ZZ34 492 aa7.28□□□□□ -1.24
HERC4-215ENST00000515753 MSTNO14793 375 aa7.28□□□□□ -1.24
HERC4-215ENST00000515753 MSX1P28360 303 aa7.28□□□□□ -1.24
HERC4-215ENST00000515753 GTF2E1P29083 439 aaPredicted RBP7.28□□□□□ -1.24
HERC4-215ENST00000515753 GALNT6Q8NCL4 622 aa7.28□□□□□ -1.24
HERC4-215ENST00000515753 CFHR5Q9BXR6 569 aa7.28□□□□□ -1.24
HERC4-215ENST00000515753 ETNK1Q9HBU6 452 aa7.28□□□□□ -1.24
HERC4-215ENST00000515753 DOLKQ9UPQ8 538 aa7.28□□□□□ -1.24
HERC4-215ENST00000515753 CSB-PGBD3P0DP91 1061 aa7.27□□□□□ -1.25
HERC4-215ENST00000515753 MAP2K3P46734 347 aa7.27□□□□□ -1.25
HERC4-215ENST00000515753 UBAP2LQ14157 1087 aaKnown RBP7.27□□□□□ -1.25
HERC4-215ENST00000515753 OXLD1Q5BKU9 147 aa7.27□□□□□ -1.25
HERC4-215ENST00000515753 PGBD3Q8N328 593 aa7.27□□□□□ -1.25
HERC4-215ENST00000515753 PHTF2Q8N3S3 785 aa7.27□□□□□ -1.25
HERC4-215ENST00000515753 SPOCK3Q9BQ16 436 aa7.27□□□□□ -1.25
HERC4-215ENST00000515753 EIF4G2P78344 907 aaKnown RBP eCLIP7.26□□□□□ -1.25
HERC4-215ENST00000515753 VAC14Q08AM6 782 aa7.26□□□□□ -1.25
HERC4-215ENST00000515753 USP4Q13107 963 aa7.26□□□□□ -1.25
HERC4-215ENST00000515753 IRF5Q13568 498 aa7.26□□□□□ -1.25
HERC4-215ENST00000515753 TLR1Q15399 786 aa7.26□□□□□ -1.25
HERC4-215ENST00000515753 SLFNL1Q499Z3 407 aa7.26□□□□□ -1.25
HERC4-215ENST00000515753 ESCO1Q5FWF5 840 aa7.26□□□□□ -1.25
HERC4-215ENST00000515753 XP32Q5T750 250 aa7.26□□□□□ -1.25
HERC4-215ENST00000515753 RNF135Q8IUD6 432 aa7.26□□□□□ -1.25
HERC4-215ENST00000515753 ABHD17AQ96GS6 310 aa7.26□□□□□ -1.25
HERC4-215ENST00000515753 RRAGCQ9HB90 399 aa7.26□□□□□ -1.25
HERC4-215ENST00000515753 PHF24Q9UPV7 400 aa7.26□□□□□ -1.25
HERC4-215ENST00000515753 C2CD2LO14523 706 aa7.25□□□□□ -1.25
HERC4-215ENST00000515753 LRRC4BQ9NT99 713 aa7.25□□□□□ -1.25
HERC4-215ENST00000515753 BNIP3LO60238 219 aa7.24□□□□□ -1.25
HERC4-215ENST00000515753 BMP4P12644 408 aa7.24□□□□□ -1.25
HERC4-215ENST00000515753 PLA2G4AP47712 749 aa7.24□□□□□ -1.25
HERC4-215ENST00000515753 CTBSQ01459 385 aa7.24□□□□□ -1.25
HERC4-215ENST00000515753 EFHC2Q5JST6 749 aa7.24□□□□□ -1.25
HERC4-215ENST00000515753 RHBDD1Q8TEB9 315 aa7.24□□□□□ -1.25
HERC4-215ENST00000515753 EDARADDQ8WWZ3 215 aa7.24□□□□□ -1.25
HERC4-215ENST00000515753 PROCP04070 461 aa7.23□□□□□ -1.25
HERC4-215ENST00000515753 PPARGC1BQ86YN6 1023 aaKnown RBP7.23□□□□□ -1.25
HERC4-215ENST00000515753 KRBA1A5PL33 1030 aa7.22□□□□□ -1.25
HERC4-215ENST00000515753 FGFR3P22607 806 aa7.22□□□□□ -1.25
HERC4-215ENST00000515753 AMPD1P23109 780 aa7.22□□□□□ -1.25
HERC4-215ENST00000515753 TMEM132AQ24JP5 1023 aa7.22□□□□□ -1.25
HERC4-215ENST00000515753 AIDAQ96BJ3 306 aa7.22□□□□□ -1.25
HERC4-215ENST00000515753 GDPD2Q9HCC8 539 aa7.22□□□□□ -1.25
HERC4-215ENST00000515753 GGA1Q9UJY5 639 aa7.22□□□□□ -1.25
HERC4-215ENST00000515753 GDF2Q9UK05 429 aaPredicted RBP7.22□□□□□ -1.25
HERC4-215ENST00000515753 ATXN7L1Q9ULK2 861 aaPredicted RBP7.22□□□□□ -1.25
HERC4-215ENST00000515753 ADAM23O75077 832 aa7.21□□□□□ -1.26
HERC4-215ENST00000515753 COL8A1P27658 744 aa7.21□□□□□ -1.26
HERC4-215ENST00000515753 ABL2P42684 1182 aa7.21□□□□□ -1.26
HERC4-215ENST00000515753 SCNN1DP51172 638 aa7.21□□□□□ -1.26
HERC4-215ENST00000515753 GDF10P55107 478 aa7.21□□□□□ -1.26
HERC4-215ENST00000515753 LBRQ14739 615 aaKnown RBP7.21□□□□□ -1.26
HERC4-215ENST00000515753 GOLGA6L1Q8N7Z2 621 aa7.21□□□□□ -1.26
HERC4-215ENST00000515753 PRM3Q9NNZ6 103 aa7.21□□□□□ -1.26
HERC4-215ENST00000515753 NDFIP2Q9NV92 336 aa7.21□□□□□ -1.26
HERC4-215ENST00000515753 MKL2Q9ULH7 1088 aa7.21□□□□□ -1.26
HERC4-215ENST00000515753 INHAP05111 366 aa7.2□□□□□ -1.26
HERC4-215ENST00000515753 TBC1D9Q6ZT07 1266 aa7.2□□□□□ -1.26
HERC4-215ENST00000515753 ZCCHC2Q9C0B9 1178 aaKnown RBP7.2□□□□□ -1.26
HERC4-215ENST00000515753 CRISPLD1Q9H336 500 aa7.2□□□□□ -1.26
HERC4-215ENST00000515753 SUV39H2Q9H5I1 410 aa7.2□□□□□ -1.26
HERC4-215ENST00000515753 SERTAD1Q9UHV2 236 aa7.2□□□□□ -1.26
HERC4-215ENST00000515753 CHIC2Q9UKJ5 165 aa7.2□□□□□ -1.26
HERC4-215ENST00000515753 GRIN2CQ14957 1233 aa7.19□□□□□ -1.26
HERC4-215ENST00000515753 SIRT1Q96EB6 747 aa7.19□□□□□ -1.26
HERC4-215ENST00000515753 NEURL1BA8MQ27 555 aa7.18□□□□□ -1.26
HERC4-215ENST00000515753 HOXB4P17483 251 aaPredicted RBP7.18□□□□□ -1.26
HERC4-215ENST00000515753 ATP4AP20648 1035 aa7.18□□□□□ -1.26
HERC4-215ENST00000515753 PLPP7Q8NBV4 271 aa7.18□□□□□ -1.26
HERC4-215ENST00000515753 DNAAF2Q9NVR5 837 aaKnown RBP7.18□□□□□ -1.26
HERC4-215ENST00000515753 DCDC2BA2VCK2 349 aa7.17□□□□□ -1.26
HERC4-215ENST00000515753 SMTNP53814 917 aa7.17□□□□□ -1.26
HERC4-215ENST00000515753 ARSJQ5FYB0 599 aaPredicted RBP7.17□□□□□ -1.26
HERC4-215ENST00000515753 LINC00114Q6XXX2 140 aa7.17□□□□□ -1.26
HERC4-215ENST00000515753 SLCO4C1Q6ZQN7 724 aa7.17□□□□□ -1.26
HERC4-215ENST00000515753 NIFKQ9BYG3 293 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms