RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 PRIMPOLQ96LW4 560 aa16.25■□□□□ 0.19
SH3TC1-225ENST00000515682 SYNMO15061 1565 aa16.24■□□□□ 0.19
SH3TC1-225ENST00000515682 PDE1AP54750 535 aa16.24■□□□□ 0.19
SH3TC1-225ENST00000515682 CEBPZQ03701 1054 aaKnown RBP16.24■□□□□ 0.19
SH3TC1-225ENST00000515682 RUFY2Q8WXA3 655 aa16.24■□□□□ 0.19
SH3TC1-225ENST00000515682 STRN4Q9NRL3 753 aa16.24■□□□□ 0.19
SH3TC1-225ENST00000515682 CCDC112Q8NEF3 446 aa16.24■□□□□ 0.19
SH3TC1-225ENST00000515682 GADD45BO75293 160 aaPredicted RBP16.24■□□□□ 0.19
SH3TC1-225ENST00000515682 TERF1P54274 439 aa16.24■□□□□ 0.19
SH3TC1-225ENST00000515682 NSFL1CQ9UNZ2 370 aaKnown RBP16.24■□□□□ 0.19
SH3TC1-225ENST00000515682 TPM3P06753 285 aa16.23■□□□□ 0.19
SH3TC1-225ENST00000515682 CKAP2LQ8IYA6 745 aa16.23■□□□□ 0.19
SH3TC1-225ENST00000515682 TNMDQ9H2S6 317 aa16.23■□□□□ 0.19
SH3TC1-225ENST00000515682 NPATQ14207 1427 aa16.23■□□□□ 0.19
SH3TC1-225ENST00000515682 MAST1Q9Y2H9 1570 aa16.23■□□□□ 0.19
SH3TC1-225ENST00000515682 ACEP12821 1306 aa16.23■□□□□ 0.19
SH3TC1-225ENST00000515682 CASTP20810 708 aaKnown RBP16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 CCT4P50991 539 aaKnown RBP16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 STK3Q13188 491 aa16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 SMAP1Q8IYB5 467 aaPredicted RBP16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 CNTROBQ8N137 903 aa16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 A0A1W2PP64 1363 aa16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 PPIP5K1Q6PFW1 1433 aa16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 CEP85Q6P2H3 762 aa16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 KIF2CQ99661 725 aa16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 CGNQ9P2M7 1197 aaKnown RBP16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 IFIT2P09913 472 aaKnown RBP16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 HSPA2P54652 639 aa16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 JAKMIP1Q96N16 626 aaKnown RBP16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 PRDM11Q9NQV5 511 aa16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 HDAC5Q9UQL6 1122 aa16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 LARP1BQ659C4 914 aaKnown RBP16.22■□□□□ 0.19
SH3TC1-225ENST00000515682 NUP62CLQ9H1M0 184 aa16.21■□□□□ 0.19
SH3TC1-225ENST00000515682 PLEKHO1Q53GL0 409 aaPredicted RBP16.21■□□□□ 0.19
SH3TC1-225ENST00000515682 ESYT1Q9BSJ8 1104 aa16.21■□□□□ 0.19
SH3TC1-225ENST00000515682 ABCC1P33527 1531 aa16.21■□□□□ 0.19
SH3TC1-225ENST00000515682 TNNT3P45378 269 aaPredicted RBP16.21■□□□□ 0.18
SH3TC1-225ENST00000515682 JARID2Q92833 1246 aaPredicted RBP16.21■□□□□ 0.18
SH3TC1-225ENST00000515682 SIRT2Q8IXJ6 389 aa16.2■□□□□ 0.18
SH3TC1-225ENST00000515682 POLKQ9UBT6 870 aa16.2■□□□□ 0.18
SH3TC1-225ENST00000515682 SPG7Q9UQ90 795 aa16.2■□□□□ 0.18
SH3TC1-225ENST00000515682 NLRP1Q9C000 1473 aa16.2■□□□□ 0.18
SH3TC1-225ENST00000515682 ERICH4A6NGS2 130 aa16.2■□□□□ 0.18
SH3TC1-225ENST00000515682 STX6O43752 255 aa16.2■□□□□ 0.18
SH3TC1-225ENST00000515682 FILIP1Q7Z7B0 1213 aa16.2■□□□□ 0.18
SH3TC1-225ENST00000515682 KRT85P78386 507 aa16.2■□□□□ 0.18
SH3TC1-225ENST00000515682 ZRANB1Q9UGI0 708 aa16.2■□□□□ 0.18
SH3TC1-225ENST00000515682 KDM5AP29375 1690 aaKnown RBP16.2■□□□□ 0.18
SH3TC1-225ENST00000515682 HOMER1Q86YM7 354 aa16.19■□□□□ 0.18
SH3TC1-225ENST00000515682 MYRIPQ8NFW9 859 aa16.19■□□□□ 0.18
SH3TC1-225ENST00000515682 SF3A1Q15459 793 aaKnown RBP16.19■□□□□ 0.18
SH3TC1-225ENST00000515682 PHF23Q9BUL5 403 aaPredicted RBP16.19■□□□□ 0.18
SH3TC1-225ENST00000515682 PREX2Q70Z35 1606 aa16.19■□□□□ 0.18
SH3TC1-225ENST00000515682 MAP3K11Q16584 847 aa16.19■□□□□ 0.18
SH3TC1-225ENST00000515682 PLEKHF1Q96S99 279 aa16.19■□□□□ 0.18
SH3TC1-225ENST00000515682 C9orf78Q9NZ63 289 aaPredicted RBP16.19■□□□□ 0.18
SH3TC1-225ENST00000515682 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
SH3TC1-225ENST00000515682 KCNA6P17658 529 aa16.18■□□□□ 0.18
SH3TC1-225ENST00000515682 GORABQ5T7V8 394 aa16.18■□□□□ 0.18
SH3TC1-225ENST00000515682 ZNF530Q6P9A1 599 aaPredicted RBP16.18■□□□□ 0.18
SH3TC1-225ENST00000515682 UBE2HP62256 183 aa16.18■□□□□ 0.18
SH3TC1-225ENST00000515682 UVSSAQ2YD98 709 aa16.18■□□□□ 0.18
SH3TC1-225ENST00000515682 KCNH5Q8NCM2 988 aa16.18■□□□□ 0.18
SH3TC1-225ENST00000515682 PDRG1Q9NUG6 133 aa16.18■□□□□ 0.18
SH3TC1-225ENST00000515682 LRRFIP2Q9Y608 721 aaKnown RBP16.18■□□□□ 0.18
SH3TC1-225ENST00000515682 TNNT1P13805 278 aa16.17■□□□□ 0.18
SH3TC1-225ENST00000515682 TOM1L2Q6ZVM7 507 aa16.17■□□□□ 0.18
SH3TC1-225ENST00000515682 TFIP11Q9UBB9 837 aaKnown RBP16.17■□□□□ 0.18
SH3TC1-225ENST00000515682 MLH3Q9UHC1 1453 aa16.17■□□□□ 0.18
SH3TC1-225ENST00000515682 SRGAP3O43295 1099 aa16.17■□□□□ 0.18
SH3TC1-225ENST00000515682 PIP4K2BP78356 416 aa16.17■□□□□ 0.18
SH3TC1-225ENST00000515682 AEBP1Q8IUX7 1158 aa16.17■□□□□ 0.18
SH3TC1-225ENST00000515682 FMNL2Q96PY5 1086 aa16.17■□□□□ 0.18
SH3TC1-225ENST00000515682 ZFYVE16Q7Z3T8 1539 aa16.17■□□□□ 0.18
SH3TC1-225ENST00000515682 CCAR2Q8N163 923 aaKnown RBP16.17■□□□□ 0.18
SH3TC1-225ENST00000515682 E9PCH4 1651 aa16.17■□□□□ 0.18
SH3TC1-225ENST00000515682 NCKAP5LQ9HCH0 1330 aa16.17■□□□□ 0.18
SH3TC1-225ENST00000515682 CCDC30Q5VVM6 783 aa16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 ZSCAN22P10073 491 aaPredicted RBP16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 TATP17735 454 aaPredicted RBP16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 U2AF2P26368 475 aaKnown RBP eCLIP16.16■□□□□ 0.189e-16■■■■□ 25.6
SH3TC1-225ENST00000515682 DNM1Q05193 864 aaKnown RBP16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 PRPF40BQ6NWY9 871 aaKnown RBP16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 CLASRPQ8N2M8 674 aaKnown RBP16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 PIBF1Q8WXW3 757 aa16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 LIMCH1Q9UPQ0 1083 aa16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 TBX22Q9Y458 520 aa16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 NUTM2BA6NNL0 878 aaPredicted RBP16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 NUTM2EB1AL46 878 aaPredicted RBP16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 GNL2Q13823 731 aaKnown RBP16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 NUTM2AQ8IVF1 878 aaPredicted RBP16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 SRCIN1Q9C0H9 1055 aa16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 TAF7LQ5H9L4 462 aa16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 MEX3CQ5U5Q3 659 aaKnown RBP16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 SPATA32Q96LK8 384 aa16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 CLASP1Q7Z460 1538 aa16.16■□□□□ 0.18
SH3TC1-225ENST00000515682 CPA1P15085 419 aa16.15■□□□□ 0.18
SH3TC1-225ENST00000515682 GJB2P29033 226 aa16.15■□□□□ 0.18
SH3TC1-225ENST00000515682 NEXNQ0ZGT2 675 aa16.15■□□□□ 0.18
SH3TC1-225ENST00000515682 CCDC186Q7Z3E2 898 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms