RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 ATP6V1AP38606 617 aa25.32■■□□□ 1.64
SPOP-220ENST00000515508 PCGF6Q9BYE7 350 aa25.32■■□□□ 1.64
SPOP-220ENST00000515508 ATG3Q9NT62 314 aa25.32■■□□□ 1.64
SPOP-220ENST00000515508 GNPATO15228 680 aa25.31■■□□□ 1.64
SPOP-220ENST00000515508 HSPA5P11021 654 aaKnown RBP25.3■■□□□ 1.64
SPOP-220ENST00000515508 PANK3Q9H999 370 aa25.3■■□□□ 1.64
SPOP-220ENST00000515508 KIF13BQ9NQT8 1826 aa25.3■■□□□ 1.64
SPOP-220ENST00000515508 ERVV-2B6SEH9 535 aa25.29■■□□□ 1.64
SPOP-220ENST00000515508 ADCY9O60503 1353 aa25.29■■□□□ 1.64
SPOP-220ENST00000515508 KDM6AO15550 1401 aaPredicted RBP25.29■■□□□ 1.64
SPOP-220ENST00000515508 ATP10DQ9P241 1426 aa25.29■■□□□ 1.64
SPOP-220ENST00000515508 DCAF5Q96JK2 942 aa25.28■■□□□ 1.64
SPOP-220ENST00000515508 KIAA1551Q9HCM1 1747 aa25.27■■□□□ 1.64
SPOP-220ENST00000515508 HSP90AB1P08238 724 aaKnown RBP25.27■■□□□ 1.64
SPOP-220ENST00000515508 CICQ96RK0 1608 aaPredicted RBP25.26■■□□□ 1.63
SPOP-220ENST00000515508 SLC4A9Q96Q91 983 aa25.25■■□□□ 1.63
SPOP-220ENST00000515508 C4AP0C0L4 1744 aa25.24■■□□□ 1.63
SPOP-220ENST00000515508 PLEKHO1Q53GL0 409 aaPredicted RBP25.24■■□□□ 1.63
SPOP-220ENST00000515508 CEP350Q5VT06 3117 aa25.23■■□□□ 1.63
SPOP-220ENST00000515508 AMOTQ4VCS5 1084 aa25.23■■□□□ 1.63
SPOP-220ENST00000515508 CNTNAP4Q9C0A0 1308 aa25.22■■□□□ 1.63
SPOP-220ENST00000515508 ZNF530Q6P9A1 599 aaPredicted RBP25.22■■□□□ 1.63
SPOP-220ENST00000515508 RTCBQ9Y3I0 505 aaKnown RBP25.22■■□□□ 1.63
SPOP-220ENST00000515508 MYH14Q7Z406 1995 aaKnown RBP25.22■■□□□ 1.63
SPOP-220ENST00000515508 RC3H1Q5TC82 1133 aaKnown RBP25.21■■□□□ 1.63
SPOP-220ENST00000515508 PXDNLA1KZ92 1463 aa25.21■■□□□ 1.63
SPOP-220ENST00000515508 MMP10P09238 476 aa25.2■■□□□ 1.62
SPOP-220ENST00000515508 ADRA2BP18089 450 aa25.2■■□□□ 1.62
SPOP-220ENST00000515508 MORC1Q86VD1 984 aa25.2■■□□□ 1.62
SPOP-220ENST00000515508 AEBP1Q8IUX7 1158 aa25.2■■□□□ 1.62
SPOP-220ENST00000515508 SCN11AQ9UI33 1791 aa25.2■■□□□ 1.62
SPOP-220ENST00000515508 C10orf71Q711Q0 1435 aa25.2■■□□□ 1.62
SPOP-220ENST00000515508 TRAPPC3LQ5T215 181 aa25.19■■□□□ 1.62
SPOP-220ENST00000515508 RBM42Q9BTD8 480 aaKnown RBP25.19■■□□□ 1.62
SPOP-220ENST00000515508 TJP1Q07157 1748 aa25.19■■□□□ 1.62
SPOP-220ENST00000515508 N4BP2Q86UW6 1770 aaPredicted RBP25.18■■□□□ 1.62
SPOP-220ENST00000515508 CABP4P57796 275 aa25.18■■□□□ 1.62
SPOP-220ENST00000515508 NLGN1Q8N2Q7 840 aa25.17■■□□□ 1.62
SPOP-220ENST00000515508 GPBP1L1Q9HC44 474 aaPredicted RBP25.17■■□□□ 1.62
SPOP-220ENST00000515508 WWC3Q9ULE0 1092 aa25.17■■□□□ 1.62
SPOP-220ENST00000515508 BRCA1P38398 1863 aaKnown RBP25.16■■□□□ 1.62
SPOP-220ENST00000515508 ARHGEF1Q92888 912 aaKnown RBP25.16■■□□□ 1.62
SPOP-220ENST00000515508 RPS6KA4O75676 772 aa25.15■■□□□ 1.62
SPOP-220ENST00000515508 MTHFSP49914 203 aa25.15■■□□□ 1.62
SPOP-220ENST00000515508 C1orf141Q5JVX7 400 aa25.15■■□□□ 1.62
SPOP-220ENST00000515508 KNSTRNQ9Y448 316 aa25.15■■□□□ 1.62
SPOP-220ENST00000515508 GYS1P13807 737 aa25.14■■□□□ 1.62
SPOP-220ENST00000515508 IL13P35225 146 aa25.13■■□□□ 1.61
SPOP-220ENST00000515508 TGFB2P61812 414 aa25.13■■□□□ 1.61
SPOP-220ENST00000515508 SULT6B1Q6IMI4 303 aa25.13■■□□□ 1.61
SPOP-220ENST00000515508 ADAMTS7Q9UKP4 1686 aa25.12■■□□□ 1.61
SPOP-220ENST00000515508 VIRMAQ69YN4 1812 aaKnown RBP25.12■■□□□ 1.61
SPOP-220ENST00000515508 RFC4P35249 363 aa25.11■■□□□ 1.61
SPOP-220ENST00000515508 AMER1Q5JTC6 1135 aaPredicted RBP25.11■■□□□ 1.61
SPOP-220ENST00000515508 NFATC2IPQ8NCF5 419 aa25.11■■□□□ 1.61
SPOP-220ENST00000515508 MRC1P22897 1456 aa25.1■■□□□ 1.61
SPOP-220ENST00000515508 PTCD1O75127 700 aaKnown RBP25.1■■□□□ 1.61
SPOP-220ENST00000515508 CCER1Q8TC90 406 aaPredicted RBP25.1■■□□□ 1.61
SPOP-220ENST00000515508 CRKLP46109 303 aaKnown RBP25.09■■□□□ 1.61
SPOP-220ENST00000515508 CCDC87Q9NVE4 849 aa25.09■■□□□ 1.61
SPOP-220ENST00000515508 ZNF526Q8TF50 670 aaPredicted RBP25.08■■□□□ 1.61
SPOP-220ENST00000515508 ARFGEF1Q9Y6D6 1849 aa25.07■■□□□ 1.6
SPOP-220ENST00000515508 AKAP4Q5JQC9 854 aa25.06■■□□□ 1.6
SPOP-220ENST00000515508 PARP3Q9Y6F1 533 aa25.06■■□□□ 1.6
SPOP-220ENST00000515508 KIF7Q2M1P5 1343 aa25.06■■□□□ 1.6
SPOP-220ENST00000515508 A0A0G2JLW4 131 aa25.05■■□□□ 1.6
SPOP-220ENST00000515508 BCS1LQ9Y276 419 aa25.05■■□□□ 1.6
SPOP-220ENST00000515508 USP42Q9H9J4 1324 aaKnown RBP25.05■■□□□ 1.6
SPOP-220ENST00000515508 DPEP1P16444 411 aa25.03■■□□□ 1.6
SPOP-220ENST00000515508 SLC52A2Q9HAB3 445 aa25.03■■□□□ 1.6
SPOP-220ENST00000515508 KCPQ6ZWJ8 1503 aa25.02■■□□□ 1.6
SPOP-220ENST00000515508 SRP68Q9UHB9 627 aaKnown RBP25.02■■□□□ 1.6
SPOP-220ENST00000515508 KIF3CO14782 793 aa25.01■■□□□ 1.59
SPOP-220ENST00000515508 INTS5Q6P9B9 1019 aaKnown RBP25.01■■□□□ 1.59
SPOP-220ENST00000515508 UBR2Q8IWV8 1755 aa25■■□□□ 1.59
SPOP-220ENST00000515508 HSPA6P17066 643 aa25■■□□□ 1.59
SPOP-220ENST00000515508 KCNA3P22001 575 aa25■■□□□ 1.59
SPOP-220ENST00000515508 FKBP8Q14318 412 aa25■■□□□ 1.59
SPOP-220ENST00000515508 PER1O15534 1290 aaPredicted RBP24.99■■□□□ 1.59
SPOP-220ENST00000515508 DDR1Q08345 913 aa24.99■■□□□ 1.59
SPOP-220ENST00000515508 LGR6Q9HBX8 967 aa24.99■■□□□ 1.59
SPOP-220ENST00000515508 RNMTO43148 476 aaKnown RBP24.98■■□□□ 1.59
SPOP-220ENST00000515508 FCHSD2O94868 740 aa24.98■■□□□ 1.59
SPOP-220ENST00000515508 SOS1Q07889 1333 aaPredicted RBP24.97■■□□□ 1.59
SPOP-220ENST00000515508 HMOX1P09601 288 aa24.97■■□□□ 1.59
SPOP-220ENST00000515508 DNAJC10Q8IXB1 793 aa24.97■■□□□ 1.59
SPOP-220ENST00000515508 COL3A1P02461 1466 aaPredicted RBP24.96■■□□□ 1.59
SPOP-220ENST00000515508 NRXN2Q9P2S2 1712 aa24.96■■□□□ 1.59
SPOP-220ENST00000515508 ARHGAP27Q6ZUM4 889 aa24.95■■□□□ 1.58
SPOP-220ENST00000515508 AFDNP55196 1824 aaKnown RBP24.95■■□□□ 1.58
SPOP-220ENST00000515508 POLRMTO00411 1230 aaKnown RBP24.94■■□□□ 1.58
SPOP-220ENST00000515508 DIAPH1O60610 1272 aaKnown RBP24.94■■□□□ 1.58
SPOP-220ENST00000515508 CYP19A1P11511 503 aaPredicted RBP24.94■■□□□ 1.58
SPOP-220ENST00000515508 TM4SF1P30408 202 aa24.94■■□□□ 1.58
SPOP-220ENST00000515508 MTHFSDQ2M296 383 aaKnown RBP24.94■■□□□ 1.58
SPOP-220ENST00000515508 PIM2Q9P1W9 311 aa24.94■■□□□ 1.58
SPOP-220ENST00000515508 SLC39A6Q13433 755 aa24.93■■□□□ 1.58
SPOP-220ENST00000515508 COL15A1P39059 1388 aa24.93■■□□□ 1.58
SPOP-220ENST00000515508 NPC1L1Q9UHC9 1359 aa24.93■■□□□ 1.58
SPOP-220ENST00000515508 DLEC1Q9Y238 1755 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms