RNA–Protein interactions for RNA: ENST00000515351.1

PCDH1-208, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-208ENST00000515351 NFAT5O94916 1531 aa18.49■□□□□ 0.55
PCDH1-208ENST00000515351 GNAI3P08754 354 aa18.49■□□□□ 0.55
PCDH1-208ENST00000515351 GBP4Q96PP9 640 aa18.49■□□□□ 0.55
PCDH1-208ENST00000515351 PHF8Q9UPP1 1060 aa18.49■□□□□ 0.55
PCDH1-208ENST00000515351 GOLGA6L3A6NEY3 463 aa18.48■□□□□ 0.55
PCDH1-208ENST00000515351 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
PCDH1-208ENST00000515351 RGPD2P0DJD1 1756 aa18.48■□□□□ 0.55
PCDH1-208ENST00000515351 PDE1AP54750 535 aa18.48■□□□□ 0.55
PCDH1-208ENST00000515351 NECTIN2Q92692 538 aa18.47■□□□□ 0.55
PCDH1-208ENST00000515351 ZNF142P52746 1687 aaPredicted RBP18.47■□□□□ 0.55
PCDH1-208ENST00000515351 PHRF1Q9P1Y6 1649 aaKnown RBP18.47■□□□□ 0.55
PCDH1-208ENST00000515351 KDM3BQ7LBC6 1761 aa18.47■□□□□ 0.55
PCDH1-208ENST00000515351 C14orf37Q86TY3 774 aa18.47■□□□□ 0.55
PCDH1-208ENST00000515351 EXOC6BQ9Y2D4 811 aa18.47■□□□□ 0.55
PCDH1-208ENST00000515351 MED1Q15648 1581 aaPredicted RBP18.47■□□□□ 0.55
PCDH1-208ENST00000515351 REC8O95072 547 aa18.46■□□□□ 0.55
PCDH1-208ENST00000515351 USHBP1Q8N6Y0 703 aa18.46■□□□□ 0.55
PCDH1-208ENST00000515351 CEMIPQ8WUJ3 1361 aa18.46■□□□□ 0.55
PCDH1-208ENST00000515351 SALL3Q9BXA9 1300 aa18.46■□□□□ 0.54
PCDH1-208ENST00000515351 IP6K1Q92551 441 aa18.45■□□□□ 0.54
PCDH1-208ENST00000515351 LMO7Q8WWI1 1683 aa18.45■□□□□ 0.54
PCDH1-208ENST00000515351 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
PCDH1-208ENST00000515351 LRRCC1Q9C099 1032 aa18.45■□□□□ 0.54
PCDH1-208ENST00000515351 PNMA6EA0A0J9YXQ4 647 aa18.44■□□□□ 0.54
PCDH1-208ENST00000515351 ERC2O15083 957 aa18.44■□□□□ 0.54
PCDH1-208ENST00000515351 XRCC6P12956 609 aaKnown RBP eCLIP18.44■□□□□ 0.54
PCDH1-208ENST00000515351 IBTKQ9P2D0 1353 aaPredicted RBP18.44■□□□□ 0.54
PCDH1-208ENST00000515351 PTMSP20962 102 aa18.44■□□□□ 0.54
PCDH1-208ENST00000515351 HDGFL1Q5TGJ6 251 aa18.43■□□□□ 0.54
PCDH1-208ENST00000515351 LRRFIP2Q9Y608 721 aaKnown RBP18.43■□□□□ 0.54
PCDH1-208ENST00000515351 CLEC17AQ6ZS10 378 aa18.42■□□□□ 0.54
PCDH1-208ENST00000515351 ANKLE2Q86XL3 938 aa18.42■□□□□ 0.54
PCDH1-208ENST00000515351 USP44Q9H0E7 712 aa18.42■□□□□ 0.54
PCDH1-208ENST00000515351 ADGRL3Q9HAR2 1447 aa18.42■□□□□ 0.54
PCDH1-208ENST00000515351 SSFA2P28290 1259 aa18.42■□□□□ 0.54
PCDH1-208ENST00000515351 SKOR2Q2VWA4 1001 aaPredicted RBP18.42■□□□□ 0.54
PCDH1-208ENST00000515351 MX1P20591 662 aa18.41■□□□□ 0.54
PCDH1-208ENST00000515351 NBPF6Q5VWK0 638 aa18.41■□□□□ 0.54
PCDH1-208ENST00000515351 FAM43AQ8N2R8 423 aa18.41■□□□□ 0.54
PCDH1-208ENST00000515351 NBPF4Q96M43 638 aa18.41■□□□□ 0.54
PCDH1-208ENST00000515351 ARXQ96QS3 562 aa18.41■□□□□ 0.54
PCDH1-208ENST00000515351 ST18O60284 1047 aa18.41■□□□□ 0.54
PCDH1-208ENST00000515351 UBTFL1P0CB47 393 aaPredicted RBP18.4■□□□□ 0.54
PCDH1-208ENST00000515351 TSHZ3Q63HK5 1081 aa18.4■□□□□ 0.54
PCDH1-208ENST00000515351 RBM33Q96EV2 1170 aaKnown RBP18.4■□□□□ 0.54
PCDH1-208ENST00000515351 PHAXQ9H814 394 aaKnown RBP18.4■□□□□ 0.54
PCDH1-208ENST00000515351 ISY1Q9ULR0 285 aaKnown RBP18.4■□□□□ 0.54
PCDH1-208ENST00000515351 MRE11P49959 708 aa18.39■□□□□ 0.53
PCDH1-208ENST00000515351 KCNH5Q8NCM2 988 aa18.39■□□□□ 0.53
PCDH1-208ENST00000515351 PSME1Q06323 249 aa18.39■□□□□ 0.53
PCDH1-208ENST00000515351 HOXB7P09629 217 aa18.38■□□□□ 0.53
PCDH1-208ENST00000515351 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
PCDH1-208ENST00000515351 ESCO1Q5FWF5 840 aa18.38■□□□□ 0.53
PCDH1-208ENST00000515351 STAP2Q9UGK3 403 aa18.38■□□□□ 0.53
PCDH1-208ENST00000515351 SRCIN1Q9C0H9 1055 aa18.38■□□□□ 0.53
PCDH1-208ENST00000515351 LGR6Q9HBX8 967 aa18.38■□□□□ 0.53
PCDH1-208ENST00000515351 NUCB2P80303 420 aa18.37■□□□□ 0.53
PCDH1-208ENST00000515351 SSH3Q8TE77 659 aa18.37■□□□□ 0.53
PCDH1-208ENST00000515351 GOLGA6L22H0YM25 854 aa18.37■□□□□ 0.53
PCDH1-208ENST00000515351 ESYT1Q9BSJ8 1104 aa18.37■□□□□ 0.53
PCDH1-208ENST00000515351 PANK2Q9BZ23 570 aa18.37■□□□□ 0.53
PCDH1-208ENST00000515351 BAG4O95429 457 aaKnown RBP18.36■□□□□ 0.53
PCDH1-208ENST00000515351 CWC22Q9HCG8 908 aaKnown RBP18.36■□□□□ 0.53
PCDH1-208ENST00000515351 AOX1Q06278 1338 aa18.36■□□□□ 0.53
PCDH1-208ENST00000515351 CYP2E1P05181 493 aaPredicted RBP18.35■□□□□ 0.53
PCDH1-208ENST00000515351 EIF2S2P20042 333 aaKnown RBP18.35■□□□□ 0.53
PCDH1-208ENST00000515351 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
PCDH1-208ENST00000515351 GRPEL1Q9HAV7 217 aa18.35■□□□□ 0.53
PCDH1-208ENST00000515351 SLIT3O75094 1523 aa18.34■□□□□ 0.53
PCDH1-208ENST00000515351 NCAPD2Q15021 1401 aa18.34■□□□□ 0.53
PCDH1-208ENST00000515351 CHMLP26374 656 aa18.34■□□□□ 0.53
PCDH1-208ENST00000515351 AKAP4Q5JQC9 854 aa18.34■□□□□ 0.53
PCDH1-208ENST00000515351 CHPF2Q9P2E5 772 aa18.34■□□□□ 0.53
PCDH1-208ENST00000515351 ZBTB7CA1YPR0 619 aa18.33■□□□□ 0.53
PCDH1-208ENST00000515351 TRIM6-TRIM34B2RNG4 842 aa18.33■□□□□ 0.53
PCDH1-208ENST00000515351 POLA2Q14181 598 aa18.33■□□□□ 0.53
PCDH1-208ENST00000515351 LRRC59Q96AG4 307 aaKnown RBP18.33■□□□□ 0.53
PCDH1-208ENST00000515351 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.53
PCDH1-208ENST00000515351 TEFQ10587 303 aa18.33■□□□□ 0.52
PCDH1-208ENST00000515351 ZNF530Q6P9A1 599 aaPredicted RBP18.33■□□□□ 0.52
PCDH1-208ENST00000515351 PPP1R42Q7Z4L9 355 aa18.33■□□□□ 0.52
PCDH1-208ENST00000515351 RILPL2Q969X0 211 aa18.33■□□□□ 0.52
PCDH1-208ENST00000515351 SIPA1L3O60292 1781 aaPredicted RBP18.33■□□□□ 0.52
PCDH1-208ENST00000515351 KCNQ3O43525 872 aa18.32■□□□□ 0.52
PCDH1-208ENST00000515351 RAB11FIP3O75154 756 aa18.32■□□□□ 0.52
PCDH1-208ENST00000515351 PLEKHO1Q53GL0 409 aaPredicted RBP18.32■□□□□ 0.52
PCDH1-208ENST00000515351 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
PCDH1-208ENST00000515351 PXDNQ92626 1479 aa18.32■□□□□ 0.52
PCDH1-208ENST00000515351 BTBD11A6QL63 1104 aa18.31■□□□□ 0.52
PCDH1-208ENST00000515351 PKP1Q13835 747 aa18.31■□□□□ 0.52
PCDH1-208ENST00000515351 BEND3Q5T5X7 828 aa18.31■□□□□ 0.52
PCDH1-208ENST00000515351 ZGPATQ8N5A5 531 aaKnown RBP18.31■□□□□ 0.52
PCDH1-208ENST00000515351 DNAAF4Q8WXU2 420 aa18.31■□□□□ 0.52
PCDH1-208ENST00000515351 IL1RAPL2Q9NP60 686 aa18.31■□□□□ 0.52
PCDH1-208ENST00000515351 OVOS2A0A0G2JMS6 1433 aa18.31■□□□□ 0.52
PCDH1-208ENST00000515351 ADAMTSL3P82987 1691 aa18.31■□□□□ 0.52
PCDH1-208ENST00000515351 AMOTQ4VCS5 1084 aa18.31■□□□□ 0.52
PCDH1-208ENST00000515351 RGPD5Q99666 1765 aa18.31■□□□□ 0.52
PCDH1-208ENST00000515351 PI4KAP2A4QPH2 592 aa18.3■□□□□ 0.52
PCDH1-208ENST00000515351 SURF6O75683 361 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms