RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 PCDHB11Q9Y5F2 797 aa9.8□□□□□ -0.84
NPHP3-211ENST00000515289 ESPNB1AK53 854 aa9.79□□□□□ -0.84
NPHP3-211ENST00000515289 ZNF76P36508 570 aa9.79□□□□□ -0.84
NPHP3-211ENST00000515289 MAPK8P45983 427 aa9.79□□□□□ -0.84
NPHP3-211ENST00000515289 GNL2Q13823 731 aaKnown RBP9.79□□□□□ -0.84
NPHP3-211ENST00000515289 SEPT12Q8IYM1 358 aa9.79□□□□□ -0.84
NPHP3-211ENST00000515289 FAM160A2Q8N612 972 aaPredicted RBP9.79□□□□□ -0.84
NPHP3-211ENST00000515289 TMC1Q8TDI8 760 aa9.79□□□□□ -0.84
NPHP3-211ENST00000515289 GMLQ99445 158 aa9.79□□□□□ -0.84
NPHP3-211ENST00000515289 CAPN10Q9HC96 672 aa9.79□□□□□ -0.84
NPHP3-211ENST00000515289 VTI1BQ9UEU0 232 aa9.79□□□□□ -0.84
NPHP3-211ENST00000515289 CCDC88BA6NC98 1476 aa9.79□□□□□ -0.84
NPHP3-211ENST00000515289 MAGEB6P1A0A0J9YX57 407 aa9.78□□□□□ -0.84
NPHP3-211ENST00000515289 IGHA2P01877 340 aa9.78□□□□□ -0.84
NPHP3-211ENST00000515289 PSMD2Q13200 908 aa9.78□□□□□ -0.84
NPHP3-211ENST00000515289 ERFEQ4G0M1 354 aa9.78□□□□□ -0.84
NPHP3-211ENST00000515289 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
NPHP3-211ENST00000515289 DHX38Q92620 1227 aaKnown RBP9.78□□□□□ -0.84
NPHP3-211ENST00000515289 ALKBH8Q96BT7 664 aaKnown RBP9.78□□□□□ -0.84
NPHP3-211ENST00000515289 ZNF358Q9NW07 568 aa9.78□□□□□ -0.84
NPHP3-211ENST00000515289 PCDH10Q9P2E7 1040 aa9.78□□□□□ -0.84
NPHP3-211ENST00000515289 PBX2P40425 430 aa9.77□□□□□ -0.85
NPHP3-211ENST00000515289 APLP1P51693 650 aa9.77□□□□□ -0.85
NPHP3-211ENST00000515289 ATP2B2Q01814 1243 aa9.77□□□□□ -0.85
NPHP3-211ENST00000515289 ALKBH2Q6NS38 261 aa9.77□□□□□ -0.85
NPHP3-211ENST00000515289 SLC10A4Q96EP9 437 aa9.77□□□□□ -0.85
NPHP3-211ENST00000515289 FAM129BQ96TA1 746 aa9.77□□□□□ -0.85
NPHP3-211ENST00000515289 TLDC2A0PJX2 215 aa9.76□□□□□ -0.85
NPHP3-211ENST00000515289 PDE3BQ13370 1112 aa9.76□□□□□ -0.85
NPHP3-211ENST00000515289 BPHLQ86WA6 291 aaPredicted RBP9.76□□□□□ -0.85
NPHP3-211ENST00000515289 SPSB2Q99619 263 aa9.76□□□□□ -0.85
NPHP3-211ENST00000515289 FZD6O60353 706 aa9.75□□□□□ -0.85
NPHP3-211ENST00000515289 MYCP01106 439 aaPredicted RBP9.75□□□□□ -0.85
NPHP3-211ENST00000515289 GTF2F1P35269 517 aaKnown RBP eCLIP9.75□□□□□ -0.85
NPHP3-211ENST00000515289 CCDC144BQ3MJ40 725 aa9.75□□□□□ -0.85
NPHP3-211ENST00000515289 C16orf46Q6P387 395 aa9.75□□□□□ -0.85
NPHP3-211ENST00000515289 ZNF662Q6ZS27 426 aa9.75□□□□□ -0.85
NPHP3-211ENST00000515289 MRPL50Q8N5N7 158 aaKnown RBP9.75□□□□□ -0.85
NPHP3-211ENST00000515289 GAS2L2Q8NHY3 880 aa9.75□□□□□ -0.85
NPHP3-211ENST00000515289 ACBD3Q9H3P7 528 aa9.75□□□□□ -0.85
NPHP3-211ENST00000515289 SCUBE2Q9NQ36 999 aa9.75□□□□□ -0.85
NPHP3-211ENST00000515289 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.75□□□□□ -0.85
NPHP3-211ENST00000515289 EIF1AXP47813 144 aaKnown RBP9.74□□□□□ -0.85
NPHP3-211ENST00000515289 PPP4CP60510 307 aa9.74□□□□□ -0.85
NPHP3-211ENST00000515289 SCG3Q8WXD2 468 aaKnown RBP9.74□□□□□ -0.85
NPHP3-211ENST00000515289 VTI1AQ96AJ9 217 aa9.74□□□□□ -0.85
NPHP3-211ENST00000515289 CWC22Q9HCG8 908 aaKnown RBP9.74□□□□□ -0.85
NPHP3-211ENST00000515289 PRDM9Q9NQV7 894 aa9.74□□□□□ -0.85
NPHP3-211ENST00000515289 RNF19AQ9NV58 838 aa9.74□□□□□ -0.85
NPHP3-211ENST00000515289 CCDC87Q9NVE4 849 aa9.74□□□□□ -0.85
NPHP3-211ENST00000515289 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.74□□□□□ -0.85
NPHP3-211ENST00000515289 AXIN2Q9Y2T1 843 aa9.74□□□□□ -0.85
NPHP3-211ENST00000515289 GPR182O15218 404 aa9.73□□□□□ -0.85
NPHP3-211ENST00000515289 CDV3Q9UKY7 258 aaKnown RBP9.73□□□□□ -0.85
NPHP3-211ENST00000515289 IQSEC3Q9UPP2 1182 aaPredicted RBP9.73□□□□□ -0.85
NPHP3-211ENST00000515289 BAZ1BQ9UIG0 1483 aaKnown RBP9.72□□□□□ -0.85
NPHP3-211ENST00000515289 TMEM229AB2RXF0 380 aa9.72□□□□□ -0.85
NPHP3-211ENST00000515289 RBL2Q08999 1139 aa9.72□□□□□ -0.85
NPHP3-211ENST00000515289 ALG1LQ6GMV1 187 aa9.72□□□□□ -0.85
NPHP3-211ENST00000515289 PTCRAQ6ISU1 281 aaPredicted RBP9.72□□□□□ -0.85
NPHP3-211ENST00000515289 SAP130Q9H0E3 1048 aa9.72□□□□□ -0.85
NPHP3-211ENST00000515289 WWC3Q9ULE0 1092 aa9.72□□□□□ -0.85
NPHP3-211ENST00000515289 WASLO00401 505 aaPredicted RBP9.71□□□□□ -0.86
NPHP3-211ENST00000515289 BACH1O14867 736 aa9.71□□□□□ -0.86
NPHP3-211ENST00000515289 AAMPQ13685 434 aa9.71□□□□□ -0.86
NPHP3-211ENST00000515289 ENOX2Q16206 610 aaKnown RBP9.71□□□□□ -0.86
NPHP3-211ENST00000515289 SOGA3Q5TF21 947 aa9.71□□□□□ -0.86
NPHP3-211ENST00000515289 MAMSTRQ6ZN01 415 aa9.71□□□□□ -0.86
NPHP3-211ENST00000515289 C1QTNF2Q9BXJ5 285 aa9.71□□□□□ -0.86
NPHP3-211ENST00000515289 STIM2Q9P246 746 aa9.71□□□□□ -0.86
NPHP3-211ENST00000515289 ATAD2Q6PL18 1390 aa9.71□□□□□ -0.86
NPHP3-211ENST00000515289 NCAPD3P42695 1498 aa9.71□□□□□ -0.86
NPHP3-211ENST00000515289 TK2O00142 265 aa9.7□□□□□ -0.86
NPHP3-211ENST00000515289 DNAJA1P31689 397 aaKnown RBP9.7□□□□□ -0.86
NPHP3-211ENST00000515289 TNNI2P48788 182 aa9.7□□□□□ -0.86
NPHP3-211ENST00000515289 AGERQ15109 404 aa9.7□□□□□ -0.86
NPHP3-211ENST00000515289 SDE2Q6IQ49 451 aa9.7□□□□□ -0.86
NPHP3-211ENST00000515289 TBX22Q9Y458 520 aa9.7□□□□□ -0.86
NPHP3-211ENST00000515289 EMILIN1Q9Y6C2 1016 aa9.7□□□□□ -0.86
NPHP3-211ENST00000515289 HMGXB3Q12766 1538 aa9.7□□□□□ -0.86
NPHP3-211ENST00000515289 TNFRSF10BO14763 440 aa9.69□□□□□ -0.86
NPHP3-211ENST00000515289 GNA15P30679 374 aa9.69□□□□□ -0.86
NPHP3-211ENST00000515289 ARID5AQ03989 594 aa9.69□□□□□ -0.86
NPHP3-211ENST00000515289 C4orf48Q5BLP8 95 aa9.69□□□□□ -0.86
NPHP3-211ENST00000515289 TRMT44Q8IYL2 757 aaKnown RBP9.69□□□□□ -0.86
NPHP3-211ENST00000515289 HPS5Q9UPZ3 1129 aa9.69□□□□□ -0.86
NPHP3-211ENST00000515289 EPHA4P54764 986 aa9.68□□□□□ -0.86
NPHP3-211ENST00000515289 VARS2Q5ST30 1063 aaKnown RBP9.68□□□□□ -0.86
NPHP3-211ENST00000515289 EGFLAMQ63HQ2 1017 aa9.68□□□□□ -0.86
NPHP3-211ENST00000515289 TNS4Q8IZW8 715 aa9.68□□□□□ -0.86
NPHP3-211ENST00000515289 CCDC24Q8N4L8 307 aa9.68□□□□□ -0.86
NPHP3-211ENST00000515289 ABTB2Q8N961 1025 aa9.68□□□□□ -0.86
NPHP3-211ENST00000515289 ANKK1Q8NFD2 765 aa9.68□□□□□ -0.86
NPHP3-211ENST00000515289 FOXJ1Q92949 421 aa9.68□□□□□ -0.86
NPHP3-211ENST00000515289 CRELD1Q96HD1 420 aa9.68□□□□□ -0.86
NPHP3-211ENST00000515289 SETDB2Q96T68 719 aa9.68□□□□□ -0.86
NPHP3-211ENST00000515289 CYLDQ9NQC7 956 aa9.68□□□□□ -0.86
NPHP3-211ENST00000515289 TSR3Q9UJK0 312 aaKnown RBP9.68□□□□□ -0.86
NPHP3-211ENST00000515289 SBNO2Q9Y2G9 1366 aa9.67□□□□□ -0.86
NPHP3-211ENST00000515289 PNMA6FA0A0J9YX94 578 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms