RNA–Protein interactions for RNA: ENST00000514990.1

PLXND1-216, Transcript of plexin D1, humanhuman

TSL 2

Gene PLXND1, Length 1,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-216ENST00000514990 CDCA8Q53HL2 280 aa16.48■□□□□ 0.23
PLXND1-216ENST00000514990 PANK3Q9H999 370 aa16.47■□□□□ 0.23
PLXND1-216ENST00000514990 GPBP1L1Q9HC44 474 aaPredicted RBP16.47■□□□□ 0.23
PLXND1-216ENST00000514990 PPM1GO15355 546 aaPredicted RBP16.46■□□□□ 0.23
PLXND1-216ENST00000514990 SSFA2P28290 1259 aa16.46■□□□□ 0.23
PLXND1-216ENST00000514990 LINC00116Q8NCU8 138 aa16.46■□□□□ 0.23
PLXND1-216ENST00000514990 WWC3Q9ULE0 1092 aa16.46■□□□□ 0.23
PLXND1-216ENST00000514990 LOC102724428A0A0B4J2F2 783 aa16.45■□□□□ 0.22
PLXND1-216ENST00000514990 SIK1P57059 783 aa16.45■□□□□ 0.22
PLXND1-216ENST00000514990 ZNF526Q8TF50 670 aaPredicted RBP16.45■□□□□ 0.22
PLXND1-216ENST00000514990 SPG7Q9UQ90 795 aa16.45■□□□□ 0.22
PLXND1-216ENST00000514990 SBF1O95248 1867 aa16.44■□□□□ 0.22
PLXND1-216ENST00000514990 WASHC2AQ641Q2 1341 aa16.44■□□□□ 0.22
PLXND1-216ENST00000514990 ITPK1Q13572 414 aa16.43■□□□□ 0.22
PLXND1-216ENST00000514990 IFFO2Q5TF58 517 aa16.43■□□□□ 0.22
PLXND1-216ENST00000514990 EYA1Q99502 592 aa16.43■□□□□ 0.22
PLXND1-216ENST00000514990 TMOD3Q9NYL9 352 aa16.43■□□□□ 0.22
PLXND1-216ENST00000514990 ASAP1Q9ULH1 1129 aa16.43■□□□□ 0.22
PLXND1-216ENST00000514990 SCN11AQ9UI33 1791 aa16.43■□□□□ 0.22
PLXND1-216ENST00000514990 GNPATO15228 680 aa16.42■□□□□ 0.22
PLXND1-216ENST00000514990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.42■□□□□ 0.22
PLXND1-216ENST00000514990 PXDNLA1KZ92 1463 aa16.42■□□□□ 0.22
PLXND1-216ENST00000514990 KDRP35968 1356 aa16.41■□□□□ 0.22
PLXND1-216ENST00000514990 HSPA6P17066 643 aa16.41■□□□□ 0.22
PLXND1-216ENST00000514990 POLKQ9UBT6 870 aa16.41■□□□□ 0.22
PLXND1-216ENST00000514990 TJP1Q07157 1748 aa16.41■□□□□ 0.22
PLXND1-216ENST00000514990 CCDC88AQ3V6T2 1871 aa16.4■□□□□ 0.22
PLXND1-216ENST00000514990 PHKG2P15735 406 aa16.4■□□□□ 0.22
PLXND1-216ENST00000514990 ATP6V1AP38606 617 aa16.4■□□□□ 0.22
PLXND1-216ENST00000514990 CNGB1Q14028 1251 aaPredicted RBP16.4■□□□□ 0.22
PLXND1-216ENST00000514990 IFNL2Q8IZJ0 200 aa16.4■□□□□ 0.22
PLXND1-216ENST00000514990 KIF7Q2M1P5 1343 aa16.4■□□□□ 0.22
PLXND1-216ENST00000514990 ATG3Q9NT62 314 aa16.39■□□□□ 0.21
PLXND1-216ENST00000514990 PLEKHG2Q9H7P9 1386 aa16.38■□□□□ 0.21
PLXND1-216ENST00000514990 AFDNP55196 1824 aaKnown RBP16.38■□□□□ 0.21
PLXND1-216ENST00000514990 C10orf71Q711Q0 1435 aa16.38■□□□□ 0.21
PLXND1-216ENST00000514990 MMP10P09238 476 aa16.38■□□□□ 0.21
PLXND1-216ENST00000514990 WDR90Q96KV7 1748 aa16.38■□□□□ 0.21
PLXND1-216ENST00000514990 PCNTO95613 3336 aa16.37■□□□□ 0.21
PLXND1-216ENST00000514990 KIF3CO14782 793 aa16.36■□□□□ 0.21
PLXND1-216ENST00000514990 EIF4A2Q14240 407 aaKnown RBP16.36■□□□□ 0.21
PLXND1-216ENST00000514990 ADAMTS7Q9UKP4 1686 aa16.36■□□□□ 0.21
PLXND1-216ENST00000514990 SLC4A9Q96Q91 983 aa16.35■□□□□ 0.21
PLXND1-216ENST00000514990 KDM6AO15550 1401 aaPredicted RBP16.35■□□□□ 0.21
PLXND1-216ENST00000514990 DLEC1Q9Y238 1755 aa16.34■□□□□ 0.21
PLXND1-216ENST00000514990 RTCBQ9Y3I0 505 aaKnown RBP16.34■□□□□ 0.21
PLXND1-216ENST00000514990 TNRC6CQ9HCJ0 1690 aaKnown RBP16.34■□□□□ 0.21
PLXND1-216ENST00000514990 TRAPPC3LQ5T215 181 aa16.33■□□□□ 0.2
PLXND1-216ENST00000514990 A0A0G2JLW4 131 aa16.32■□□□□ 0.2
PLXND1-216ENST00000514990 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
PLXND1-216ENST00000514990 TGFB2P61812 414 aa16.32■□□□□ 0.2
PLXND1-216ENST00000514990 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
PLXND1-216ENST00000514990 CNTNAP4Q9C0A0 1308 aa16.32■□□□□ 0.2
PLXND1-216ENST00000514990 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
PLXND1-216ENST00000514990 RC3H1Q5TC82 1133 aaKnown RBP16.31■□□□□ 0.2
PLXND1-216ENST00000514990 MORC1Q86VD1 984 aa16.31■□□□□ 0.2
PLXND1-216ENST00000514990 NLGN1Q8N2Q7 840 aa16.31■□□□□ 0.2
PLXND1-216ENST00000514990 ARHGEF1Q92888 912 aaKnown RBP16.31■□□□□ 0.2
PLXND1-216ENST00000514990 BCS1LQ9Y276 419 aa16.31■□□□□ 0.2
PLXND1-216ENST00000514990 GYS1P13807 737 aa16.3■□□□□ 0.2
PLXND1-216ENST00000514990 AMER1Q5JTC6 1135 aaPredicted RBP16.3■□□□□ 0.2
PLXND1-216ENST00000514990 AEBP1Q8IUX7 1158 aa16.3■□□□□ 0.2
PLXND1-216ENST00000514990 DCAF5Q96JK2 942 aa16.3■□□□□ 0.2
PLXND1-216ENST00000514990 HSP90AB1P08238 724 aaKnown RBP16.29■□□□□ 0.2
PLXND1-216ENST00000514990 DPEP1P16444 411 aa16.29■□□□□ 0.2
PLXND1-216ENST00000514990 CC2D1BQ5T0F9 858 aaKnown RBP16.29■□□□□ 0.2
PLXND1-216ENST00000514990 CCDC87Q9NVE4 849 aa16.29■□□□□ 0.2
PLXND1-216ENST00000514990 NRXN2Q9P2S2 1712 aa16.28■□□□□ 0.2
PLXND1-216ENST00000514990 PER1O15534 1290 aaPredicted RBP16.28■□□□□ 0.2
PLXND1-216ENST00000514990 RPS6KA4O75676 772 aa16.28■□□□□ 0.2
PLXND1-216ENST00000514990 RFC4P35249 363 aa16.28■□□□□ 0.2
PLXND1-216ENST00000514990 ZNF530Q6P9A1 599 aaPredicted RBP16.28■□□□□ 0.2
PLXND1-216ENST00000514990 KNSTRNQ9Y448 316 aa16.28■□□□□ 0.2
PLXND1-216ENST00000514990 TIAM2Q8IVF5 1701 aa16.28■□□□□ 0.2
PLXND1-216ENST00000514990 PLEKHO1Q53GL0 409 aaPredicted RBP16.27■□□□□ 0.2
PLXND1-216ENST00000514990 ARHGAP27Q6ZUM4 889 aa16.27■□□□□ 0.2
PLXND1-216ENST00000514990 PARP3Q9Y6F1 533 aa16.27■□□□□ 0.2
PLXND1-216ENST00000514990 UBR2Q8IWV8 1755 aa16.27■□□□□ 0.2
PLXND1-216ENST00000514990 DICER1Q9UPY3 1922 aaKnown RBP16.27■□□□□ 0.19
PLXND1-216ENST00000514990 CACNA1SQ13698 1873 aa16.27■□□□□ 0.19
PLXND1-216ENST00000514990 TOMM70O94826 608 aa16.26■□□□□ 0.19
PLXND1-216ENST00000514990 FCHSD2O94868 740 aa16.26■□□□□ 0.19
PLXND1-216ENST00000514990 APLP1P51693 650 aa16.26■□□□□ 0.19
PLXND1-216ENST00000514990 CABP4P57796 275 aa16.26■□□□□ 0.19
PLXND1-216ENST00000514990 NMRK2Q9NPI5 230 aa16.26■□□□□ 0.19
PLXND1-216ENST00000514990 KCNA3P22001 575 aa16.25■□□□□ 0.19
PLXND1-216ENST00000514990 PTCD1O75127 700 aaKnown RBP16.24■□□□□ 0.19
PLXND1-216ENST00000514990 AMOTQ4VCS5 1084 aa16.24■□□□□ 0.19
PLXND1-216ENST00000514990 SRP68Q9UHB9 627 aaKnown RBP16.24■□□□□ 0.19
PLXND1-216ENST00000514990 KCPQ6ZWJ8 1503 aa16.24■□□□□ 0.19
PLXND1-216ENST00000514990 USP42Q9H9J4 1324 aaKnown RBP16.23■□□□□ 0.19
PLXND1-216ENST00000514990 ANKRD31Q8N7Z5 1873 aa16.23■□□□□ 0.19
PLXND1-216ENST00000514990 CRKLP46109 303 aaKnown RBP16.23■□□□□ 0.19
PLXND1-216ENST00000514990 MTHFSP49914 203 aa16.23■□□□□ 0.19
PLXND1-216ENST00000514990 C1orf141Q5JVX7 400 aa16.23■□□□□ 0.19
PLXND1-216ENST00000514990 MRC1P22897 1456 aa16.22■□□□□ 0.19
PLXND1-216ENST00000514990 DDR1Q08345 913 aa16.22■□□□□ 0.19
PLXND1-216ENST00000514990 FKBP8Q14318 412 aa16.22■□□□□ 0.19
PLXND1-216ENST00000514990 C9orf131Q5VYM1 1079 aa16.22■□□□□ 0.19
PLXND1-216ENST00000514990 DNAJC5GQ8N7S2 189 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms