RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
SNX2-213ENST00000514949 TUBGCP6Q96RT7 1819 aa21.56■■□□□ 1.04
SNX2-213ENST00000514949 KCNA6P17658 529 aa21.56■■□□□ 1.04
SNX2-213ENST00000514949 TAF7Q15545 349 aaPredicted RBP21.56■■□□□ 1.04
SNX2-213ENST00000514949 ERC2O15083 957 aa21.55■■□□□ 1.04
SNX2-213ENST00000514949 ATP8B2P98198 1209 aa21.55■■□□□ 1.04
SNX2-213ENST00000514949 CYP2E1P05181 493 aaPredicted RBP21.53■■□□□ 1.04
SNX2-213ENST00000514949 CWC22Q9HCG8 908 aaKnown RBP21.53■■□□□ 1.04
SNX2-213ENST00000514949 NUCB2P80303 420 aa21.53■■□□□ 1.04
SNX2-213ENST00000514949 IBTKQ9P2D0 1353 aaPredicted RBP21.53■■□□□ 1.04
SNX2-213ENST00000514949 FKBP5Q13451 457 aaPredicted RBP21.52■■□□□ 1.04
SNX2-213ENST00000514949 CEMIPQ8WUJ3 1361 aa21.52■■□□□ 1.04
SNX2-213ENST00000514949 APBB1O00213 710 aa21.52■■□□□ 1.03
SNX2-213ENST00000514949 ST18O60284 1047 aa21.52■■□□□ 1.03
SNX2-213ENST00000514949 SSFA2P28290 1259 aa21.52■■□□□ 1.03
SNX2-213ENST00000514949 ABTB2Q8N961 1025 aa21.52■■□□□ 1.03
SNX2-213ENST00000514949 LRRCC1Q9C099 1032 aa21.52■■□□□ 1.03
SNX2-213ENST00000514949 STAP2Q9UGK3 403 aa21.52■■□□□ 1.03
SNX2-213ENST00000514949 GRPEL1Q9HAV7 217 aa21.51■■□□□ 1.03
SNX2-213ENST00000514949 MED1Q15648 1581 aaPredicted RBP21.51■■□□□ 1.03
SNX2-213ENST00000514949 GOLGA6L22H0YM25 854 aa21.5■■□□□ 1.03
SNX2-213ENST00000514949 FOXD4L1Q9NU39 408 aa21.5■■□□□ 1.03
SNX2-213ENST00000514949 BAG4O95429 457 aaKnown RBP21.5■■□□□ 1.03
SNX2-213ENST00000514949 SRCIN1Q9C0H9 1055 aa21.5■■□□□ 1.03
SNX2-213ENST00000514949 IL17RAQ96F46 866 aa21.49■■□□□ 1.03
SNX2-213ENST00000514949 IP6K1Q92551 441 aa21.49■■□□□ 1.03
SNX2-213ENST00000514949 EXOC6BQ9Y2D4 811 aa21.49■■□□□ 1.03
SNX2-213ENST00000514949 AOX1Q06278 1338 aa21.48■■□□□ 1.03
SNX2-213ENST00000514949 PHRF1Q9P1Y6 1649 aaKnown RBP21.48■■□□□ 1.03
SNX2-213ENST00000514949 NFAT5O94916 1531 aa21.48■■□□□ 1.03
SNX2-213ENST00000514949 PNMA6EA0A0J9YXQ4 647 aa21.48■■□□□ 1.03
SNX2-213ENST00000514949 HOXB7P09629 217 aa21.48■■□□□ 1.03
SNX2-213ENST00000514949 PLPPR3Q6T4P5 718 aa21.48■■□□□ 1.03
SNX2-213ENST00000514949 PANK2Q9BZ23 570 aa21.48■■□□□ 1.03
SNX2-213ENST00000514949 USP44Q9H0E7 712 aa21.48■■□□□ 1.03
SNX2-213ENST00000514949 CHD2O14647 1828 aaKnown RBP21.48■■□□□ 1.03
SNX2-213ENST00000514949 LTN1O94822 1766 aa21.48■■□□□ 1.03
SNX2-213ENST00000514949 MX1P20591 662 aa21.47■■□□□ 1.03
SNX2-213ENST00000514949 KLHL40Q2TBA0 621 aa21.47■■□□□ 1.03
SNX2-213ENST00000514949 CHMP4AQ9BY43 222 aa21.47■■□□□ 1.03
SNX2-213ENST00000514949 PHF8Q9UPP1 1060 aa21.47■■□□□ 1.03
SNX2-213ENST00000514949 EPB41L2O43491 1005 aaKnown RBP21.46■■□□□ 1.03
SNX2-213ENST00000514949 SSH3Q8TE77 659 aa21.46■■□□□ 1.03
SNX2-213ENST00000514949 ESYT1Q9BSJ8 1104 aa21.46■■□□□ 1.03
SNX2-213ENST00000514949 ANAPC15P60006 121 aa21.45■■□□□ 1.02
SNX2-213ENST00000514949 NUTM2GQ5VZR2 741 aa21.45■■□□□ 1.02
SNX2-213ENST00000514949 LRRFIP2Q9Y608 721 aaKnown RBP21.44■■□□□ 1.02
SNX2-213ENST00000514949 MCM2P49736 904 aa21.44■■□□□ 1.02
SNX2-213ENST00000514949 HDGFL1Q5TGJ6 251 aa21.44■■□□□ 1.02
SNX2-213ENST00000514949 KDM3BQ7LBC6 1761 aa21.43■■□□□ 1.02
SNX2-213ENST00000514949 GAS2L3Q86XJ1 694 aa21.43■■□□□ 1.02
SNX2-213ENST00000514949 RRAGDQ9NQL2 400 aaPredicted RBP21.43■■□□□ 1.02
SNX2-213ENST00000514949 ADGRL3Q9HAR2 1447 aa21.43■■□□□ 1.02
SNX2-213ENST00000514949 UBTFL1P0CB47 393 aaPredicted RBP21.43■■□□□ 1.02
SNX2-213ENST00000514949 RAB11FIP3O75154 756 aa21.42■■□□□ 1.02
SNX2-213ENST00000514949 CHMLP26374 656 aa21.42■■□□□ 1.02
SNX2-213ENST00000514949 POLA2Q14181 598 aa21.42■■□□□ 1.02
SNX2-213ENST00000514949 EIF4A1P60842 406 aaKnown RBP21.41■■□□□ 1.02
SNX2-213ENST00000514949 AK9Q5TCS8 1911 aa21.41■■□□□ 1.02
SNX2-213ENST00000514949 LTV1Q96GA3 475 aaPredicted RBP21.41■■□□□ 1.02
SNX2-213ENST00000514949 LMO7Q8WWI1 1683 aa21.41■■□□□ 1.02
SNX2-213ENST00000514949 KCNH5Q8NCM2 988 aa21.4■■□□□ 1.02
SNX2-213ENST00000514949 NECTIN2Q92692 538 aa21.4■■□□□ 1.02
SNX2-213ENST00000514949 NCAPD2Q15021 1401 aa21.4■■□□□ 1.02
SNX2-213ENST00000514949 NBPF6Q5VWK0 638 aa21.4■■□□□ 1.02
SNX2-213ENST00000514949 NBPF4Q96M43 638 aa21.4■■□□□ 1.02
SNX2-213ENST00000514949 MCCP23508 829 aa21.39■■□□□ 1.01
SNX2-213ENST00000514949 ARXQ96QS3 562 aa21.39■■□□□ 1.01
SNX2-213ENST00000514949 PHAXQ9H814 394 aaKnown RBP21.38■■□□□ 1.01
SNX2-213ENST00000514949 LMBRD1Q9NUN5 540 aa21.38■■□□□ 1.01
SNX2-213ENST00000514949 DDX49Q9Y6V7 483 aaKnown RBP21.38■■□□□ 1.01
SNX2-213ENST00000514949 CUL4AQ13619 759 aa21.38■■□□□ 1.01
SNX2-213ENST00000514949 TSHZ3Q63HK5 1081 aa21.38■■□□□ 1.01
SNX2-213ENST00000514949 USHBP1Q8N6Y0 703 aa21.38■■□□□ 1.01
SNX2-213ENST00000514949 ZGPATQ8N5A5 531 aaKnown RBP21.37■■□□□ 1.01
SNX2-213ENST00000514949 ZDHHC9Q9Y397 364 aa21.37■■□□□ 1.01
SNX2-213ENST00000514949 OVOS2A0A0G2JMS6 1433 aa21.37■■□□□ 1.01
SNX2-213ENST00000514949 ZNF445P59923 1031 aa21.37■■□□□ 1.01
SNX2-213ENST00000514949 PKP1Q13835 747 aa21.37■■□□□ 1.01
SNX2-213ENST00000514949 ANKLE2Q86XL3 938 aa21.37■■□□□ 1.01
SNX2-213ENST00000514949 ZNF142P52746 1687 aaPredicted RBP21.36■■□□□ 1.01
SNX2-213ENST00000514949 NEK4P51957 841 aa21.36■■□□□ 1.01
SNX2-213ENST00000514949 AKAP4Q5JQC9 854 aa21.36■■□□□ 1.01
SNX2-213ENST00000514949 INTS4Q96HW7 963 aaKnown RBP21.36■■□□□ 1.01
SNX2-213ENST00000514949 TMX3Q96JJ7 454 aa21.36■■□□□ 1.01
SNX2-213ENST00000514949 CLCN1P35523 988 aa21.35■■□□□ 1.01
SNX2-213ENST00000514949 BEND3Q5T5X7 828 aa21.35■■□□□ 1.01
SNX2-213ENST00000514949 PPP1R42Q7Z4L9 355 aa21.35■■□□□ 1.01
SNX2-213ENST00000514949 LGR6Q9HBX8 967 aa21.35■■□□□ 1.01
SNX2-213ENST00000514949 ANO8Q9HCE9 1232 aaPredicted RBP21.35■■□□□ 1.01
SNX2-213ENST00000514949 MCTP1Q6DN14 999 aa21.34■■□□□ 1.01
SNX2-213ENST00000514949 LMTK3Q96Q04 1460 aa21.34■■□□□ 1.01
SNX2-213ENST00000514949 TRIM6-TRIM34B2RNG4 842 aa21.34■■□□□ 1.01
SNX2-213ENST00000514949 AMOTQ4VCS5 1084 aa21.34■■□□□ 1.01
SNX2-213ENST00000514949 DNAAF4Q8WXU2 420 aa21.34■■□□□ 1.01
SNX2-213ENST00000514949 C14orf37Q86TY3 774 aa21.33■■□□□ 1.01
SNX2-213ENST00000514949 UNC5CLQ8IV45 518 aa21.33■■□□□ 1.01
SNX2-213ENST00000514949 RHPN1Q8TCX5 695 aa21.33■■□□□ 1.01
SNX2-213ENST00000514949 RILPL2Q969X0 211 aa21.33■■□□□ 1.01
SNX2-213ENST00000514949 KIF1BPQ96EK5 621 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms