RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 AMOTQ4VCS5 1084 aa9.49□□□□□ -0.89
SMAD1-213ENST00000514778 KRT27Q7Z3Y8 459 aa9.49□□□□□ -0.89
SMAD1-213ENST00000514778 PNNQ9H307 717 aaKnown RBP9.49□□□□□ -0.89
SMAD1-213ENST00000514778 CIZ1Q9ULV3 898 aaPredicted RBP9.49□□□□□ -0.89
SMAD1-213ENST00000514778 OVOS2A0A0G2JMS6 1433 aa9.48□□□□□ -0.89
SMAD1-213ENST00000514778 RGPD1P0DJD0 1748 aa9.48□□□□□ -0.89
SMAD1-213ENST00000514778 PLCG2P16885 1265 aa9.48□□□□□ -0.89
SMAD1-213ENST00000514778 IRX5P78411 483 aaPredicted RBP9.48□□□□□ -0.89
SMAD1-213ENST00000514778 PDE3BQ13370 1112 aa9.48□□□□□ -0.89
SMAD1-213ENST00000514778 CNGB1Q14028 1251 aaPredicted RBP9.48□□□□□ -0.89
SMAD1-213ENST00000514778 TNS2Q63HR2 1409 aa9.48□□□□□ -0.89
SMAD1-213ENST00000514778 FCHSD2O94868 740 aa9.47□□□□□ -0.89
SMAD1-213ENST00000514778 SULT6B1Q6IMI4 303 aa9.47□□□□□ -0.89
SMAD1-213ENST00000514778 CCDC125Q86Z20 511 aa9.47□□□□□ -0.89
SMAD1-213ENST00000514778 ZCRB1Q8TBF4 217 aaKnown RBP9.47□□□□□ -0.89
SMAD1-213ENST00000514778 SPG7Q9UQ90 795 aa9.47□□□□□ -0.89
SMAD1-213ENST00000514778 WNK3Q9BYP7 1800 aa9.47□□□□□ -0.89
SMAD1-213ENST00000514778 A0A0G2JS52 829 aa9.46□□□□□ -0.9
SMAD1-213ENST00000514778 MYT1Q01538 1121 aa9.46□□□□□ -0.9
SMAD1-213ENST00000514778 PLEKHO1Q53GL0 409 aaPredicted RBP9.46□□□□□ -0.9
SMAD1-213ENST00000514778 FAM196AQ6ZSG2 479 aa9.46□□□□□ -0.9
SMAD1-213ENST00000514778 PCDH11XQ9BZA7 1347 aa9.46□□□□□ -0.9
SMAD1-213ENST00000514778 PCDH11YQ9BZA8 1340 aa9.46□□□□□ -0.9
SMAD1-213ENST00000514778 MEGF6O75095 1541 aa9.46□□□□□ -0.9
SMAD1-213ENST00000514778 LRRC37A3O60309 1634 aa9.45□□□□□ -0.9
SMAD1-213ENST00000514778 U2SURPO15042 1029 aaKnown RBP9.45□□□□□ -0.9
SMAD1-213ENST00000514778 NKX1-1Q15270 411 aaPredicted RBP9.45□□□□□ -0.9
SMAD1-213ENST00000514778 USHBP1Q8N6Y0 703 aa9.45□□□□□ -0.9
SMAD1-213ENST00000514778 OCEL1Q9H607 264 aa9.45□□□□□ -0.9
SMAD1-213ENST00000514778 HSP90AB1P08238 724 aaKnown RBP9.44□□□□□ -0.9
SMAD1-213ENST00000514778 U2AF1L5P0DN76 240 aaPredicted RBP9.44□□□□□ -0.9
SMAD1-213ENST00000514778 U2AF1Q01081 240 aaKnown RBP eCLIP9.44□□□□□ -0.9
SMAD1-213ENST00000514778 DIEXFQ68CQ4 756 aaKnown RBP9.44□□□□□ -0.9
SMAD1-213ENST00000514778 ILDR2Q71H61 639 aa9.44□□□□□ -0.9
SMAD1-213ENST00000514778 MARCH10Q8NA82 808 aaPredicted RBP9.44□□□□□ -0.9
SMAD1-213ENST00000514778 PKD1L3Q7Z443 1732 aa9.43□□□□□ -0.9
SMAD1-213ENST00000514778 CCER2I3L3R5 266 aa9.43□□□□□ -0.9
SMAD1-213ENST00000514778 NEFMP07197 916 aa9.43□□□□□ -0.9
SMAD1-213ENST00000514778 PSEN1P49768 467 aa9.43□□□□□ -0.9
SMAD1-213ENST00000514778 GOLGA2Q08379 1002 aa9.43□□□□□ -0.9
SMAD1-213ENST00000514778 PDAP1Q13442 181 aaKnown RBP9.43□□□□□ -0.9
SMAD1-213ENST00000514778 IFNL2Q8IZJ0 200 aa9.43□□□□□ -0.9
SMAD1-213ENST00000514778 RSPH6AQ9H0K4 717 aa9.43□□□□□ -0.9
SMAD1-213ENST00000514778 RGPD2P0DJD1 1756 aa9.42□□□□□ -0.9
SMAD1-213ENST00000514778 HMOX1P09601 288 aa9.42□□□□□ -0.9
SMAD1-213ENST00000514778 WDR43Q15061 677 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMAD1-213ENST00000514778 AEBP1Q8IUX7 1158 aa9.42□□□□□ -0.9
SMAD1-213ENST00000514778 GAS2L2Q8NHY3 880 aa9.42□□□□□ -0.9
SMAD1-213ENST00000514778 CYP27B1O15528 508 aa9.41□□□□□ -0.9
SMAD1-213ENST00000514778 PHKG2P15735 406 aa9.41□□□□□ -0.9
SMAD1-213ENST00000514778 AKAP4Q5JQC9 854 aa9.41□□□□□ -0.9
SMAD1-213ENST00000514778 DDX54Q8TDD1 881 aaKnown RBP9.41□□□□□ -0.9
SMAD1-213ENST00000514778 PNISRQ8TF01 805 aaKnown RBP9.41□□□□□ -0.9
SMAD1-213ENST00000514778 DCAF5Q96JK2 942 aa9.41□□□□□ -0.9
SMAD1-213ENST00000514778 BRWD3Q6RI45 1802 aa9.4□□□□□ -0.9
SMAD1-213ENST00000514778 HTATSF1O43719 755 aaKnown RBP9.4□□□□□ -0.9
SMAD1-213ENST00000514778 HMGB2P26583 209 aaKnown RBP9.4□□□□□ -0.9
SMAD1-213ENST00000514778 PRKAR2BP31323 418 aa9.4□□□□□ -0.9
SMAD1-213ENST00000514778 MKRN3Q13064 507 aaKnown RBP9.4□□□□□ -0.9
SMAD1-213ENST00000514778 C1orf141Q5JVX7 400 aa9.4□□□□□ -0.9
SMAD1-213ENST00000514778 PLEKHF1Q96S99 279 aa9.4□□□□□ -0.9
SMAD1-213ENST00000514778 BCL11BQ9C0K0 894 aaPredicted RBP9.4□□□□□ -0.9
SMAD1-213ENST00000514778 MRS2Q9HD23 443 aa9.4□□□□□ -0.9
SMAD1-213ENST00000514778 ERVV-2B6SEH9 535 aa9.39□□□□□ -0.91
SMAD1-213ENST00000514778 SOCS7O14512 581 aa9.39□□□□□ -0.91
SMAD1-213ENST00000514778 MTHFSDQ2M296 383 aaKnown RBP9.39□□□□□ -0.91
SMAD1-213ENST00000514778 ZNF530Q6P9A1 599 aaPredicted RBP9.39□□□□□ -0.91
SMAD1-213ENST00000514778 RUNDC1Q96C34 613 aa9.39□□□□□ -0.91
SMAD1-213ENST00000514778 MAPK8IP3Q9UPT6 1336 aa9.38□□□□□ -0.91
SMAD1-213ENST00000514778 PLSCR1O15162 318 aa9.38□□□□□ -0.91
SMAD1-213ENST00000514778 SF3B2Q13435 895 aaKnown RBP9.38□□□□□ -0.91
SMAD1-213ENST00000514778 UPF1Q92900 1129 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMAD1-213ENST00000514778 PHACTR3Q96KR7 559 aa9.38□□□□□ -0.91
SMAD1-213ENST00000514778 ADAMTS8Q9UP79 889 aa9.38□□□□□ -0.91
SMAD1-213ENST00000514778 SHANK3Q9BYB0 1731 aa9.38□□□□□ -0.91
SMAD1-213ENST00000514778 GNAT3A8MTJ3 354 aa9.37□□□□□ -0.91
SMAD1-213ENST00000514778 NGEFQ8N5V2 710 aa9.37□□□□□ -0.91
SMAD1-213ENST00000514778 MAP3K5Q99683 1374 aa9.37□□□□□ -0.91
SMAD1-213ENST00000514778 POTEMA6NI47 508 aa9.36□□□□□ -0.91
SMAD1-213ENST00000514778 LMOD3Q0VAK6 560 aa9.36□□□□□ -0.91
SMAD1-213ENST00000514778 NFE2L2Q16236 605 aa9.36□□□□□ -0.91
SMAD1-213ENST00000514778 FAM182BQ5T319 152 aa9.36□□□□□ -0.91
SMAD1-213ENST00000514778 PDCD7Q8N8D1 485 aaKnown RBP9.36□□□□□ -0.91
SMAD1-213ENST00000514778 NHSQ6T4R5 1651 aa9.36□□□□□ -0.91
SMAD1-213ENST00000514778 ADAMTS7Q9UKP4 1686 aa9.36□□□□□ -0.91
SMAD1-213ENST00000514778 TRIM37O94972 964 aa9.35□□□□□ -0.91
SMAD1-213ENST00000514778 BAG6P46379 1132 aa9.35□□□□□ -0.91
SMAD1-213ENST00000514778 PRIM1P49642 420 aaKnown RBP9.35□□□□□ -0.91
SMAD1-213ENST00000514778 CCDC184Q52MB2 194 aa9.35□□□□□ -0.91
SMAD1-213ENST00000514778 RTF1Q92541 710 aaKnown RBP9.35□□□□□ -0.91
SMAD1-213ENST00000514778 SMARCC1Q92922 1105 aaPredicted RBP9.35□□□□□ -0.91
SMAD1-213ENST00000514778 CEMIPQ8WUJ3 1361 aa9.35□□□□□ -0.91
SMAD1-213ENST00000514778 KDM6AO15550 1401 aaPredicted RBP9.34□□□□□ -0.91
SMAD1-213ENST00000514778 RNMTO43148 476 aaKnown RBP9.34□□□□□ -0.91
SMAD1-213ENST00000514778 POTEGQ6S5H5 508 aa9.34□□□□□ -0.91
SMAD1-213ENST00000514778 SLAIN1Q8ND83 568 aa9.34□□□□□ -0.91
SMAD1-213ENST00000514778 TMOD3Q9NYL9 352 aa9.34□□□□□ -0.91
SMAD1-213ENST00000514778 MRC1P22897 1456 aa9.34□□□□□ -0.91
SMAD1-213ENST00000514778 RGPD3A6NKT7 1758 aaPredicted RBP9.33□□□□□ -0.92
SMAD1-213ENST00000514778 RGPD4Q7Z3J3 1758 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms