RNA–Protein interactions for RNA: ENST00000514777.1

SMAD5-209, Transcript of SMAD family member 5, humanhuman

TSL 3

Gene SMAD5, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-209ENST00000514777 A0A0G2JLW4 131 aa18.3■□□□□ 0.52
SMAD5-209ENST00000514777 APLP1P51693 650 aa18.3■□□□□ 0.52
SMAD5-209ENST00000514777 EYA1Q99502 592 aa18.3■□□□□ 0.52
SMAD5-209ENST00000514777 TMOD3Q9NYL9 352 aa18.3■□□□□ 0.52
SMAD5-209ENST00000514777 TOMM70O94826 608 aa18.29■□□□□ 0.52
SMAD5-209ENST00000514777 TGFB2P61812 414 aa18.29■□□□□ 0.52
SMAD5-209ENST00000514777 SLC4A9Q96Q91 983 aa18.29■□□□□ 0.52
SMAD5-209ENST00000514777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.29■□□□□ 0.523e-7■■□□□ 14.5
SMAD5-209ENST00000514777 PHKG2P15735 406 aa18.28■□□□□ 0.52
SMAD5-209ENST00000514777 BCS1LQ9Y276 419 aa18.28■□□□□ 0.52
SMAD5-209ENST00000514777 MYH14Q7Z406 1995 aaKnown RBP18.28■□□□□ 0.52
SMAD5-209ENST00000514777 WASHC2AQ641Q2 1341 aa18.27■□□□□ 0.52
SMAD5-209ENST00000514777 NMRK2Q9NPI5 230 aa18.27■□□□□ 0.52
SMAD5-209ENST00000514777 PPM1GO15355 546 aaPredicted RBP18.26■□□□□ 0.51
SMAD5-209ENST00000514777 TRAPPC3LQ5T215 181 aa18.26■□□□□ 0.51
SMAD5-209ENST00000514777 IFNL2Q8IZJ0 200 aa18.26■□□□□ 0.51
SMAD5-209ENST00000514777 ZNF831Q5JPB2 1677 aa18.25■□□□□ 0.51
SMAD5-209ENST00000514777 C10orf71Q711Q0 1435 aa18.25■□□□□ 0.51
SMAD5-209ENST00000514777 DPEP1P16444 411 aa18.25■□□□□ 0.51
SMAD5-209ENST00000514777 KCNA3P22001 575 aa18.25■□□□□ 0.51
SMAD5-209ENST00000514777 ARHGAP27Q6ZUM4 889 aa18.25■□□□□ 0.51
SMAD5-209ENST00000514777 NLGN1Q8N2Q7 840 aa18.25■□□□□ 0.51
SMAD5-209ENST00000514777 ARHGEF1Q92888 912 aaKnown RBP18.25■□□□□ 0.51
SMAD5-209ENST00000514777 COL5A3P25940 1745 aaPredicted RBP18.25■□□□□ 0.51
SMAD5-209ENST00000514777 KDRP35968 1356 aa18.25■□□□□ 0.51
SMAD5-209ENST00000514777 ARFGEF1Q9Y6D6 1849 aa18.25■□□□□ 0.51
SMAD5-209ENST00000514777 C4AP0C0L4 1744 aa18.24■□□□□ 0.51
SMAD5-209ENST00000514777 WDR90Q96KV7 1748 aa18.24■□□□□ 0.51
SMAD5-209ENST00000514777 RTCBQ9Y3I0 505 aaKnown RBP18.24■□□□□ 0.51
SMAD5-209ENST00000514777 GYS1P13807 737 aa18.23■□□□□ 0.51
SMAD5-209ENST00000514777 POLKQ9UBT6 870 aa18.23■□□□□ 0.51
SMAD5-209ENST00000514777 FCHSD2O94868 740 aa18.22■□□□□ 0.51
SMAD5-209ENST00000514777 RC3H1Q5TC82 1133 aaKnown RBP18.22■□□□□ 0.51
SMAD5-209ENST00000514777 SBF1O95248 1867 aa18.22■□□□□ 0.51
SMAD5-209ENST00000514777 HTRA3P83110 453 aa18.21■□□□□ 0.51
SMAD5-209ENST00000514777 RBM42Q9BTD8 480 aaKnown RBP18.21■□□□□ 0.51
SMAD5-209ENST00000514777 RPS6KA4O75676 772 aa18.2■□□□□ 0.5
SMAD5-209ENST00000514777 EIF4A2Q14240 407 aaKnown RBP18.2■□□□□ 0.5
SMAD5-209ENST00000514777 RBM46Q8TBY0 533 aaKnown RBP18.2■□□□□ 0.5
SMAD5-209ENST00000514777 CCDC87Q9NVE4 849 aa18.2■□□□□ 0.5
SMAD5-209ENST00000514777 ERVV-2B6SEH9 535 aa18.19■□□□□ 0.5
SMAD5-209ENST00000514777 ADRA2BP18089 450 aa18.19■□□□□ 0.5
SMAD5-209ENST00000514777 CDCA8Q53HL2 280 aa18.19■□□□□ 0.5
SMAD5-209ENST00000514777 C9orf131Q5VYM1 1079 aa18.19■□□□□ 0.5
SMAD5-209ENST00000514777 CNTNAP4Q9C0A0 1308 aa18.19■□□□□ 0.5
SMAD5-209ENST00000514777 PARP3Q9Y6F1 533 aa18.18■□□□□ 0.5
SMAD5-209ENST00000514777 RFC4P35249 363 aa18.17■□□□□ 0.5
SMAD5-209ENST00000514777 COL13A1Q5TAT6 717 aaPredicted RBP18.16■□□□□ 0.5
SMAD5-209ENST00000514777 JMYQ8N9B5 988 aa18.16■□□□□ 0.5
SMAD5-209ENST00000514777 KLRG1Q96E93 195 aa18.16■□□□□ 0.5
SMAD5-209ENST00000514777 DCAF5Q96JK2 942 aa18.16■□□□□ 0.5
SMAD5-209ENST00000514777 KCPQ6ZWJ8 1503 aa18.15■□□□□ 0.5
SMAD5-209ENST00000514777 PIM2Q9P1W9 311 aa18.15■□□□□ 0.5
SMAD5-209ENST00000514777 SRP68Q9UHB9 627 aaKnown RBP18.15■□□□□ 0.5
SMAD5-209ENST00000514777 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
SMAD5-209ENST00000514777 DDR1Q08345 913 aa18.14■□□□□ 0.49
SMAD5-209ENST00000514777 RRAGCQ9HB90 399 aa18.14■□□□□ 0.49
SMAD5-209ENST00000514777 PCNTO95613 3336 aa18.14■□□□□ 0.49
SMAD5-209ENST00000514777 PLEKHG2Q9H7P9 1386 aa18.14■□□□□ 0.49
SMAD5-209ENST00000514777 FSTL1Q12841 308 aa18.13■□□□□ 0.49
SMAD5-209ENST00000514777 FKBP8Q14318 412 aa18.13■□□□□ 0.49
SMAD5-209ENST00000514777 ADAMTS7Q9UKP4 1686 aa18.12■□□□□ 0.49
SMAD5-209ENST00000514777 TNNT2P45379 298 aaPredicted RBP18.12■□□□□ 0.49
SMAD5-209ENST00000514777 C16orf71Q8IYS4 520 aaPredicted RBP18.12■□□□□ 0.49
SMAD5-209ENST00000514777 TJP1Q07157 1748 aa18.12■□□□□ 0.49
SMAD5-209ENST00000514777 PTCD1O75127 700 aaKnown RBP18.11■□□□□ 0.49
SMAD5-209ENST00000514777 HSP90AB1P08238 724 aaKnown RBP18.11■□□□□ 0.49
SMAD5-209ENST00000514777 CHRNA5P30532 468 aa18.11■□□□□ 0.49
SMAD5-209ENST00000514777 CRKLP46109 303 aaKnown RBP18.11■□□□□ 0.49
SMAD5-209ENST00000514777 CABP4P57796 275 aa18.11■□□□□ 0.49
SMAD5-209ENST00000514777 PLEKHO1Q53GL0 409 aaPredicted RBP18.11■□□□□ 0.49
SMAD5-209ENST00000514777 DALRD3Q5D0E6 543 aaKnown RBP18.11■□□□□ 0.49
SMAD5-209ENST00000514777 RNF181Q9P0P0 153 aa18.11■□□□□ 0.49
SMAD5-209ENST00000514777 CCDC88AQ3V6T2 1871 aa18.1■□□□□ 0.49
SMAD5-209ENST00000514777 TNRC6CQ9HCJ0 1690 aaKnown RBP18.1■□□□□ 0.49
SMAD5-209ENST00000514777 USP42Q9H9J4 1324 aaKnown RBP18.1■□□□□ 0.49
SMAD5-209ENST00000514777 TM4SF1P30408 202 aa18.1■□□□□ 0.49
SMAD5-209ENST00000514777 KDM2BQ8NHM5 1336 aa18.09■□□□□ 0.49
SMAD5-209ENST00000514777 ZNF530Q6P9A1 599 aaPredicted RBP18.09■□□□□ 0.49
SMAD5-209ENST00000514777 INTS5Q6P9B9 1019 aaKnown RBP18.09■□□□□ 0.49
SMAD5-209ENST00000514777 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
SMAD5-209ENST00000514777 AFDNP55196 1824 aaKnown RBP18.09■□□□□ 0.49
SMAD5-209ENST00000514777 POLRMTO00411 1230 aaKnown RBP18.08■□□□□ 0.48
SMAD5-209ENST00000514777 MTHFSP49914 203 aa18.07■□□□□ 0.48
SMAD5-209ENST00000514777 PRELPP51888 382 aa18.07■□□□□ 0.48
SMAD5-209ENST00000514777 SCN11AQ9UI33 1791 aa18.07■□□□□ 0.48
SMAD5-209ENST00000514777 AMOTQ4VCS5 1084 aa18.06■□□□□ 0.48
SMAD5-209ENST00000514777 AEBP1Q8IUX7 1158 aa18.06■□□□□ 0.48
SMAD5-209ENST00000514777 RASSF7Q02833 373 aa18.05■□□□□ 0.48
SMAD5-209ENST00000514777 NRXN2Q9P2S2 1712 aa18.03■□□□□ 0.48
SMAD5-209ENST00000514777 VIRMAQ69YN4 1812 aaKnown RBP18.03■□□□□ 0.48
SMAD5-209ENST00000514777 CAPN15O75808 1086 aa18.03■□□□□ 0.48
SMAD5-209ENST00000514777 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
SMAD5-209ENST00000514777 SMC1BQ8NDV3 1235 aa18.03■□□□□ 0.48
SMAD5-209ENST00000514777 DLEC1Q9Y238 1755 aa18.02■□□□□ 0.48
SMAD5-209ENST00000514777 C1orf141Q5JVX7 400 aa18.02■□□□□ 0.48
SMAD5-209ENST00000514777 DNAJC10Q8IXB1 793 aa18.02■□□□□ 0.48
SMAD5-209ENST00000514777 TNS4Q8IZW8 715 aa18.01■□□□□ 0.47
SMAD5-209ENST00000514777 SOS1Q07889 1333 aaPredicted RBP18■□□□□ 0.47
SMAD5-209ENST00000514777 GLTPD2A6NH11 291 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms