RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 HS1BP3Q53T59 392 aa16.66■□□□□ 0.26
TSPAN17-208ENST00000514705 RUFY2Q8WXA3 655 aa16.66■□□□□ 0.26
TSPAN17-208ENST00000514705 LRRFIP2Q9Y608 721 aaKnown RBP16.66■□□□□ 0.26
TSPAN17-208ENST00000514705 DYNC1I1O14576 645 aa16.66■□□□□ 0.26
TSPAN17-208ENST00000514705 MCM5P33992 734 aa16.66■□□□□ 0.26
TSPAN17-208ENST00000514705 CNTROBQ8N137 903 aa16.66■□□□□ 0.26
TSPAN17-208ENST00000514705 FBXW7Q969H0 707 aa16.66■□□□□ 0.26
TSPAN17-208ENST00000514705 ESYT1Q9BSJ8 1104 aa16.66■□□□□ 0.26
TSPAN17-208ENST00000514705 C9orf78Q9NZ63 289 aaPredicted RBP16.66■□□□□ 0.26
TSPAN17-208ENST00000514705 KIF3AQ9Y496 699 aa16.65■□□□□ 0.26
TSPAN17-208ENST00000514705 CLTCL1P53675 1640 aa16.65■□□□□ 0.26
TSPAN17-208ENST00000514705 CCDC83Q8IWF9 413 aa16.65■□□□□ 0.26
TSPAN17-208ENST00000514705 FAM184AQ8NB25 1140 aa16.65■□□□□ 0.26
TSPAN17-208ENST00000514705 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
TSPAN17-208ENST00000514705 LAMC1P11047 1609 aa16.65■□□□□ 0.26
TSPAN17-208ENST00000514705 C17orf53Q8N3J3 647 aaPredicted RBP16.65■□□□□ 0.26
TSPAN17-208ENST00000514705 TSC1Q92574 1164 aa16.65■□□□□ 0.26
TSPAN17-208ENST00000514705 TRIM5Q9C035 493 aa16.65■□□□□ 0.26
TSPAN17-208ENST00000514705 CNPY2Q9Y2B0 182 aa16.65■□□□□ 0.26
TSPAN17-208ENST00000514705 SRGAP3O43295 1099 aa16.65■□□□□ 0.26
TSPAN17-208ENST00000514705 CAMK4Q16566 473 aa16.65■□□□□ 0.26
TSPAN17-208ENST00000514705 GIMAP6Q6P9H5 292 aa16.64■□□□□ 0.25
TSPAN17-208ENST00000514705 SPG7Q9UQ90 795 aa16.64■□□□□ 0.25
TSPAN17-208ENST00000514705 CCDC183Q5T5S1 534 aa16.64■□□□□ 0.25
TSPAN17-208ENST00000514705 CASTP20810 708 aaKnown RBP16.64■□□□□ 0.25
TSPAN17-208ENST00000514705 NSFL1CQ9UNZ2 370 aaKnown RBP16.64■□□□□ 0.25
TSPAN17-208ENST00000514705 ABCC4O15439 1325 aa16.64■□□□□ 0.25
TSPAN17-208ENST00000514705 GOLGA6L19H0YKK7 550 aa16.63■□□□□ 0.25
TSPAN17-208ENST00000514705 H3BQV1 296 aa16.63■□□□□ 0.25
TSPAN17-208ENST00000514705 LETM1O95202 739 aaPredicted RBP16.63■□□□□ 0.25
TSPAN17-208ENST00000514705 IFFO2Q5TF58 517 aa16.63■□□□□ 0.25
TSPAN17-208ENST00000514705 HDGFL1Q5TGJ6 251 aa16.63■□□□□ 0.25
TSPAN17-208ENST00000514705 G2E3Q7L622 706 aa16.63■□□□□ 0.25
TSPAN17-208ENST00000514705 HSP90AB2PQ58FF8 381 aa16.63■□□□□ 0.25
TSPAN17-208ENST00000514705 ZNF771Q7L3S4 317 aaPredicted RBP16.63■□□□□ 0.25
TSPAN17-208ENST00000514705 JAKMIP1Q96N16 626 aaKnown RBP16.63■□□□□ 0.25
TSPAN17-208ENST00000514705 GADD45BO75293 160 aaPredicted RBP16.63■□□□□ 0.25
TSPAN17-208ENST00000514705 ABCC3O15438 1527 aa16.63■□□□□ 0.25
TSPAN17-208ENST00000514705 PTPRCP08575 1304 aa16.62■□□□□ 0.25
TSPAN17-208ENST00000514705 MSH6P52701 1360 aa16.62■□□□□ 0.25
TSPAN17-208ENST00000514705 GLI2P10070 1586 aa16.62■□□□□ 0.25
TSPAN17-208ENST00000514705 TBX22Q9Y458 520 aa16.62■□□□□ 0.25
TSPAN17-208ENST00000514705 DIP2BQ9P265 1576 aa16.62■□□□□ 0.25
TSPAN17-208ENST00000514705 BECN2A8MW95 431 aa16.62■□□□□ 0.25
TSPAN17-208ENST00000514705 IL13P35225 146 aa16.62■□□□□ 0.25
TSPAN17-208ENST00000514705 STK3Q13188 491 aa16.62■□□□□ 0.25
TSPAN17-208ENST00000514705 NOLC1Q14978 699 aaKnown RBP eCLIP16.62■□□□□ 0.25
TSPAN17-208ENST00000514705 FOXO3O43524 673 aa16.61■□□□□ 0.25
TSPAN17-208ENST00000514705 CCDC192P0DO97 292 aa16.61■□□□□ 0.25
TSPAN17-208ENST00000514705 CLASRPQ8N2M8 674 aaKnown RBP16.61■□□□□ 0.25
TSPAN17-208ENST00000514705 SRCIN1Q9C0H9 1055 aa16.61■□□□□ 0.25
TSPAN17-208ENST00000514705 TMEM2Q9UHN6 1383 aa16.61■□□□□ 0.25
TSPAN17-208ENST00000514705 A0A0U1RQG5 324 aaPredicted RBP16.61■□□□□ 0.25
TSPAN17-208ENST00000514705 FLIIQ13045 1269 aa16.61■□□□□ 0.25
TSPAN17-208ENST00000514705 LARP1BQ659C4 914 aaKnown RBP16.61■□□□□ 0.25
TSPAN17-208ENST00000514705 CEBPZQ03701 1054 aaKnown RBP16.61■□□□□ 0.25
TSPAN17-208ENST00000514705 SPDYE4A6NLX3 237 aa16.6■□□□□ 0.25
TSPAN17-208ENST00000514705 PALD1Q9ULE6 856 aa16.6■□□□□ 0.25
TSPAN17-208ENST00000514705 STX6O43752 255 aa16.6■□□□□ 0.25
TSPAN17-208ENST00000514705 TEFQ10587 303 aa16.6■□□□□ 0.25
TSPAN17-208ENST00000514705 CYP46A1Q9Y6A2 500 aa16.6■□□□□ 0.25
TSPAN17-208ENST00000514705 HTATSF1O43719 755 aaKnown RBP16.59■□□□□ 0.25
TSPAN17-208ENST00000514705 MYOM2P54296 1465 aa16.59■□□□□ 0.25
TSPAN17-208ENST00000514705 PDRG1Q9NUG6 133 aa16.59■□□□□ 0.25
TSPAN17-208ENST00000514705 LTKP29376 864 aa16.59■□□□□ 0.25
TSPAN17-208ENST00000514705 DDIT3P35638 169 aa16.59■□□□□ 0.25
TSPAN17-208ENST00000514705 EIF4A2Q14240 407 aaKnown RBP16.59■□□□□ 0.25
TSPAN17-208ENST00000514705 PRPF40BQ6NWY9 871 aaKnown RBP16.59■□□□□ 0.25
TSPAN17-208ENST00000514705 PDCL2Q8N4E4 241 aa16.59■□□□□ 0.25
TSPAN17-208ENST00000514705 YTHDC2Q9H6S0 1430 aaKnown RBP16.59■□□□□ 0.25
TSPAN17-208ENST00000514705 CKAP2LQ8IYA6 745 aa16.59■□□□□ 0.25
TSPAN17-208ENST00000514705 CPA1P15085 419 aa16.58■□□□□ 0.25
TSPAN17-208ENST00000514705 CHMLP26374 656 aa16.58■□□□□ 0.25
TSPAN17-208ENST00000514705 TPD52L1Q16890 204 aaPredicted RBP16.58■□□□□ 0.24
TSPAN17-208ENST00000514705 PPP4R3BQ5MIZ7 849 aa16.58■□□□□ 0.24
TSPAN17-208ENST00000514705 NPHP1O15259 732 aa16.58■□□□□ 0.24
TSPAN17-208ENST00000514705 PHF8Q9UPP1 1060 aa16.58■□□□□ 0.24
TSPAN17-208ENST00000514705 LIMCH1Q9UPQ0 1083 aa16.58■□□□□ 0.24
TSPAN17-208ENST00000514705 TET3O43151 1660 aa16.57■□□□□ 0.24
TSPAN17-208ENST00000514705 NRDCO43847 1150 aa16.57■□□□□ 0.24
TSPAN17-208ENST00000514705 ZNF500O60304 480 aaPredicted RBP16.57■□□□□ 0.24
TSPAN17-208ENST00000514705 CDK11BP21127 795 aaKnown RBP16.57■□□□□ 0.24
TSPAN17-208ENST00000514705 TNMDQ9H2S6 317 aa16.57■□□□□ 0.24
TSPAN17-208ENST00000514705 EVA1CP58658 441 aa16.57■□□□□ 0.24
TSPAN17-208ENST00000514705 ARHGAP31Q2M1Z3 1444 aa16.57■□□□□ 0.24
TSPAN17-208ENST00000514705 EFCAB6Q5THR3 1501 aa16.57■□□□□ 0.24
TSPAN17-208ENST00000514705 KCNA6P17658 529 aa16.57■□□□□ 0.24
TSPAN17-208ENST00000514705 KRT85P78386 507 aa16.57■□□□□ 0.24
TSPAN17-208ENST00000514705 AIMP1Q12904 312 aaKnown RBP16.57■□□□□ 0.24
TSPAN17-208ENST00000514705 HSP90AB4PQ58FF6 505 aa16.56■□□□□ 0.24
TSPAN17-208ENST00000514705 ZSCAN22P10073 491 aaPredicted RBP16.56■□□□□ 0.24
TSPAN17-208ENST00000514705 NUP62CLQ9H1M0 184 aa16.56■□□□□ 0.24
TSPAN17-208ENST00000514705 TFIP11Q9UBB9 837 aaKnown RBP16.56■□□□□ 0.24
TSPAN17-208ENST00000514705 BRD1O95696 1058 aa16.56■□□□□ 0.24
TSPAN17-208ENST00000514705 INO80Q9ULG1 1556 aaPredicted RBP16.56■□□□□ 0.24
TSPAN17-208ENST00000514705 MAP3K4Q9Y6R4 1608 aa16.56■□□□□ 0.24
TSPAN17-208ENST00000514705 GJB2P29033 226 aa16.55■□□□□ 0.24
TSPAN17-208ENST00000514705 UBE2HP62256 183 aa16.55■□□□□ 0.24
TSPAN17-208ENST00000514705 G3BP1Q13283 466 aaKnown RBP eCLIP16.55■□□□□ 0.24
TSPAN17-208ENST00000514705 PPP1R42Q7Z4L9 355 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms