RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 CDC14CA4D256 554 aa7.73□□□□□ -1.17
PROM1-217ENST00000514693 USP17L3A6NCW0 530 aa7.73□□□□□ -1.17
PROM1-217ENST00000514693 USP17L4A6NCW7 530 aa7.73□□□□□ -1.17
PROM1-217ENST00000514693 ERCC3P19447 782 aa7.73□□□□□ -1.17
PROM1-217ENST00000514693 SSFA2P28290 1259 aa7.73□□□□□ -1.17
PROM1-217ENST00000514693 ADD1P35611 737 aaKnown RBP7.73□□□□□ -1.17
PROM1-217ENST00000514693 USP17L2Q6R6M4 530 aa7.73□□□□□ -1.17
PROM1-217ENST00000514693 USP17L1Q7RTZ2 530 aa7.73□□□□□ -1.17
PROM1-217ENST00000514693 RNF217Q8TC41 542 aa7.73□□□□□ -1.17
PROM1-217ENST00000514693 ZNF592Q92610 1267 aa7.73□□□□□ -1.17
PROM1-217ENST00000514693 SLC35F4A4IF30 521 aa7.72□□□□□ -1.17
PROM1-217ENST00000514693 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
PROM1-217ENST00000514693 SKIP12755 728 aa7.72□□□□□ -1.17
PROM1-217ENST00000514693 ITGA6P23229 1130 aa7.72□□□□□ -1.17
PROM1-217ENST00000514693 RNF20Q5VTR2 975 aa7.72□□□□□ -1.17
PROM1-217ENST00000514693 CCDC125Q86Z20 511 aa7.72□□□□□ -1.17
PROM1-217ENST00000514693 MRRFQ96E11 262 aaKnown RBP7.72□□□□□ -1.17
PROM1-217ENST00000514693 CNTNAP3BQ96NU0 1288 aa7.72□□□□□ -1.17
PROM1-217ENST00000514693 CNTNAP3Q9BZ76 1288 aa7.72□□□□□ -1.17
PROM1-217ENST00000514693 ESF1Q9H501 851 aaKnown RBP7.72□□□□□ -1.17
PROM1-217ENST00000514693 USP17L5A8MUK1 530 aa7.71□□□□□ -1.18
PROM1-217ENST00000514693 PLEKHM2Q8IWE5 1019 aa7.71□□□□□ -1.18
PROM1-217ENST00000514693 GPR161Q8N6U8 529 aaKnown RBP7.71□□□□□ -1.18
PROM1-217ENST00000514693 NANOS1Q8WY41 292 aaKnown RBP7.71□□□□□ -1.18
PROM1-217ENST00000514693 COL25A1Q9BXS0 654 aaPredicted RBP7.71□□□□□ -1.18
PROM1-217ENST00000514693 SLAIN2Q9P270 581 aa7.71□□□□□ -1.18
PROM1-217ENST00000514693 SOWAHDA6NJG2 315 aa7.7□□□□□ -1.18
PROM1-217ENST00000514693 FAM196BA6NMK8 535 aa7.7□□□□□ -1.18
PROM1-217ENST00000514693 ATP5J2-PTCD1G3V325 749 aa7.7□□□□□ -1.18
PROM1-217ENST00000514693 MCCD1P59942 119 aaPredicted RBP7.7□□□□□ -1.18
PROM1-217ENST00000514693 NOM1Q5C9Z4 860 aaKnown RBP7.7□□□□□ -1.18
PROM1-217ENST00000514693 SV2AQ7L0J3 742 aa7.7□□□□□ -1.18
PROM1-217ENST00000514693 LYSMD3Q7Z3D4 306 aa7.7□□□□□ -1.18
PROM1-217ENST00000514693 DEPDC4Q8N2C3 294 aa7.7□□□□□ -1.18
PROM1-217ENST00000514693 VWA5B2Q8N398 1253 aa7.7□□□□□ -1.18
PROM1-217ENST00000514693 SIRT1Q96EB6 747 aa7.7□□□□□ -1.18
PROM1-217ENST00000514693 USP17L15C9J2P7 530 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 USP17L10C9JJH3 530 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 USP17L13C9JLJ4 530 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 USP17L12C9JPN9 530 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 USP17L11C9JVI0 530 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 USP17L21D6R901 530 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 USP17L18D6R9N7 530 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 USP17L22D6RA61 530 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 USP17L17D6RBQ6 530 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 USP17L19D6RCP7 530 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 USP17L20D6RJB6 530 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 MEN1O00255 615 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 ZNF16P17020 682 aaPredicted RBP7.69□□□□□ -1.18
PROM1-217ENST00000514693 USP17L24Q0WX57 530 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 CRTC2Q53ET0 693 aaPredicted RBP7.69□□□□□ -1.18
PROM1-217ENST00000514693 BCL2L13Q9BXK5 485 aa7.69□□□□□ -1.18
PROM1-217ENST00000514693 MKRN1Q9UHC7 482 aaKnown RBP7.69□□□□□ -1.18
PROM1-217ENST00000514693 KRT76Q01546 638 aa7.68□□□□□ -1.18
PROM1-217ENST00000514693 FAM69CQ0P6D2 419 aa7.68□□□□□ -1.18
PROM1-217ENST00000514693 CC2D2BQ6DHV5 1058 aa7.68□□□□□ -1.18
PROM1-217ENST00000514693 LARP1Q6PKG0 1096 aaKnown RBP7.68□□□□□ -1.18
PROM1-217ENST00000514693 PRICKLE2Q7Z3G6 844 aa7.68□□□□□ -1.18
PROM1-217ENST00000514693 KDF1Q8NAX2 398 aaPredicted RBP7.68□□□□□ -1.18
PROM1-217ENST00000514693 FAM200AQ8TCP9 573 aa7.68□□□□□ -1.18
PROM1-217ENST00000514693 CLP1Q92989 425 aaKnown RBP7.68□□□□□ -1.18
PROM1-217ENST00000514693 RASA1P20936 1047 aa7.67□□□□□ -1.18
PROM1-217ENST00000514693 SERPINB4P48594 390 aa7.67□□□□□ -1.18
PROM1-217ENST00000514693 MARSP56192 900 aaKnown RBP7.67□□□□□ -1.18
PROM1-217ENST00000514693 PTK7Q13308 1070 aa7.67□□□□□ -1.18
PROM1-217ENST00000514693 NLRP3Q96P20 1036 aa7.67□□□□□ -1.18
PROM1-217ENST00000514693 PCDHB11Q9Y5F2 797 aa7.67□□□□□ -1.18
PROM1-217ENST00000514693 SENP3-EIF4A1A0A087X0R7 540 aa7.66□□□□□ -1.18
PROM1-217ENST00000514693 HMGB1P09429 215 aaKnown RBP7.66□□□□□ -1.18
PROM1-217ENST00000514693 ATP2B4P23634 1241 aa7.66□□□□□ -1.18
PROM1-217ENST00000514693 RNF144AP50876 292 aaPredicted RBP7.66□□□□□ -1.18
PROM1-217ENST00000514693 ERVK-9P63128 1117 aa7.66□□□□□ -1.18
PROM1-217ENST00000514693 CDCA7Q9BWT1 371 aaPredicted RBP7.66□□□□□ -1.18
PROM1-217ENST00000514693 A0A1W2PRU2 124 aa7.65□□□□□ -1.18
PROM1-217ENST00000514693 RHOQP17081 205 aa7.65□□□□□ -1.18
PROM1-217ENST00000514693 SLC27A3Q5K4L6 730 aa7.65□□□□□ -1.18
PROM1-217ENST00000514693 RNFT1Q5M7Z0 435 aa7.65□□□□□ -1.18
PROM1-217ENST00000514693 CYP2U1Q7Z449 544 aa7.65□□□□□ -1.18
PROM1-217ENST00000514693 GIPC2Q8TF65 315 aa7.65□□□□□ -1.18
PROM1-217ENST00000514693 BIN2Q9UBW5 565 aaPredicted RBP7.65□□□□□ -1.18
PROM1-217ENST00000514693 GPC1P35052 558 aa7.64□□□□□ -1.19
PROM1-217ENST00000514693 NCOA4Q13772 614 aa7.64□□□□□ -1.19
PROM1-217ENST00000514693 ANKMY2Q8IV38 441 aa7.64□□□□□ -1.19
PROM1-217ENST00000514693 SVOPQ8N4V2 548 aa7.64□□□□□ -1.19
PROM1-217ENST00000514693 HSP90B1P14625 803 aaKnown RBP7.63□□□□□ -1.19
PROM1-217ENST00000514693 SCNN1AP37088 669 aa7.63□□□□□ -1.19
PROM1-217ENST00000514693 SLFNL1Q499Z3 407 aa7.63□□□□□ -1.19
PROM1-217ENST00000514693 FOXR1Q6PIV2 292 aa7.63□□□□□ -1.19
PROM1-217ENST00000514693 RIPOR1Q6ZS17 1223 aa7.63□□□□□ -1.19
PROM1-217ENST00000514693 PUS7Q96PZ0 661 aaKnown RBP7.63□□□□□ -1.19
PROM1-217ENST00000514693 CEP126Q9P2H0 1117 aa7.63□□□□□ -1.19
PROM1-217ENST00000514693 ANKRD33BA6NCL7 494 aa7.62□□□□□ -1.19
PROM1-217ENST00000514693 TCF3P15923 654 aa7.62□□□□□ -1.19
PROM1-217ENST00000514693 SCTRP47872 440 aa7.62□□□□□ -1.19
PROM1-217ENST00000514693 RNF225M0QZC1 329 aaPredicted RBP7.61□□□□□ -1.19
PROM1-217ENST00000514693 MYCP01106 439 aaPredicted RBP7.61□□□□□ -1.19
PROM1-217ENST00000514693 DPYDQ12882 1025 aa7.61□□□□□ -1.19
PROM1-217ENST00000514693 CLN3Q13286 438 aa7.61□□□□□ -1.19
PROM1-217ENST00000514693 RNF135Q8IUD6 432 aa7.61□□□□□ -1.19
PROM1-217ENST00000514693 NPAS4Q8IUM7 802 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms