RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 ZNF428Q96B54 188 aa25.41■■□□□ 1.66
SSBP2-218ENST00000514493 CCDC9Q9Y3X0 531 aaKnown RBP25.41■■□□□ 1.66
SSBP2-218ENST00000514493 ATRNO75882 1429 aa25.4■■□□□ 1.66
SSBP2-218ENST00000514493 NKX1-1Q15270 411 aaPredicted RBP25.4■■□□□ 1.66
SSBP2-218ENST00000514493 TSPYL6Q8N831 410 aa25.4■■□□□ 1.66
SSBP2-218ENST00000514493 C8orf58Q8NAV2 365 aa25.4■■□□□ 1.66
SSBP2-218ENST00000514493 TRPC5Q9UL62 973 aaPredicted RBP25.4■■□□□ 1.66
SSBP2-218ENST00000514493 BCAR3O75815 825 aa25.39■■□□□ 1.66
SSBP2-218ENST00000514493 TWISTNBQ3B726 338 aaPredicted RBP25.39■■□□□ 1.66
SSBP2-218ENST00000514493 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.39■■□□□ 1.65
SSBP2-218ENST00000514493 SLC52A2Q9HAB3 445 aa25.39■■□□□ 1.65
SSBP2-218ENST00000514493 ITGB4P16144 1822 aa25.38■■□□□ 1.65
SSBP2-218ENST00000514493 THSD7AQ9UPZ6 1657 aa25.38■■□□□ 1.65
SSBP2-218ENST00000514493 PAPPAQ13219 1627 aa25.38■■□□□ 1.65
SSBP2-218ENST00000514493 VAMP4O75379 141 aa25.38■■□□□ 1.65
SSBP2-218ENST00000514493 GLI3P10071 1580 aa25.38■■□□□ 1.65
SSBP2-218ENST00000514493 DDX54Q8TDD1 881 aaKnown RBP25.37■■□□□ 1.65
SSBP2-218ENST00000514493 GJD4Q96KN9 370 aaPredicted RBP25.37■■□□□ 1.65
SSBP2-218ENST00000514493 CACNA1FO60840 1977 aa25.37■■□□□ 1.65
SSBP2-218ENST00000514493 BTBD11A6QL63 1104 aa25.36■■□□□ 1.65
SSBP2-218ENST00000514493 KRT24Q2M2I5 525 aa25.36■■□□□ 1.65
SSBP2-218ENST00000514493 DOT1LQ8TEK3 1739 aa25.36■■□□□ 1.65
SSBP2-218ENST00000514493 PLIN1O60240 522 aa25.36■■□□□ 1.65
SSBP2-218ENST00000514493 ALDH1L2Q3SY69 923 aa25.36■■□□□ 1.65
SSBP2-218ENST00000514493 PPP4R2Q9NY27 417 aa25.36■■□□□ 1.65
SSBP2-218ENST00000514493 EXOC5O00471 708 aa25.35■■□□□ 1.65
SSBP2-218ENST00000514493 SSH1Q8WYL5 1049 aa25.35■■□□□ 1.65
SSBP2-218ENST00000514493 BCL2L13Q9BXK5 485 aa25.35■■□□□ 1.65
SSBP2-218ENST00000514493 UBR2Q8IWV8 1755 aa25.34■■□□□ 1.65
SSBP2-218ENST00000514493 ELL2O00472 640 aaPredicted RBP25.34■■□□□ 1.65
SSBP2-218ENST00000514493 SMC4Q9NTJ3 1288 aa25.34■■□□□ 1.65
SSBP2-218ENST00000514493 RXRBP28702 533 aa25.33■■□□□ 1.65
SSBP2-218ENST00000514493 ILDR2Q71H61 639 aa25.33■■□□□ 1.65
SSBP2-218ENST00000514493 SOS1Q07889 1333 aaPredicted RBP25.33■■□□□ 1.65
SSBP2-218ENST00000514493 KAT6BQ8WYB5 2073 aa25.33■■□□□ 1.64
SSBP2-218ENST00000514493 ERVV-2B6SEH9 535 aa25.32■■□□□ 1.64
SSBP2-218ENST00000514493 RBM6P78332 1123 aaKnown RBP25.32■■□□□ 1.64
SSBP2-218ENST00000514493 DDB1Q16531 1140 aa25.32■■□□□ 1.64
SSBP2-218ENST00000514493 CABP4P57796 275 aa25.31■■□□□ 1.64
SSBP2-218ENST00000514493 EIF4A1P60842 406 aaKnown RBP25.31■■□□□ 1.64
SSBP2-218ENST00000514493 NFATC2IPQ8NCF5 419 aa25.31■■□□□ 1.64
SSBP2-218ENST00000514493 C5P01031 1676 aa25.3■■□□□ 1.64
SSBP2-218ENST00000514493 BRPF1P55201 1214 aaPredicted RBP25.3■■□□□ 1.64
SSBP2-218ENST00000514493 FAM98CQ17RN3 349 aaKnown RBP25.3■■□□□ 1.64
SSBP2-218ENST00000514493 KCNQ3O43525 872 aa25.29■■□□□ 1.64
SSBP2-218ENST00000514493 KIF16BQ96L93 1317 aa25.29■■□□□ 1.64
SSBP2-218ENST00000514493 LAMB4A4D0S4 1761 aa25.28■■□□□ 1.64
SSBP2-218ENST00000514493 CANXP27824 592 aaKnown RBP25.28■■□□□ 1.64
SSBP2-218ENST00000514493 HEG1Q9ULI3 1381 aa25.28■■□□□ 1.64
SSBP2-218ENST00000514493 HOXB7P09629 217 aa25.27■■□□□ 1.64
SSBP2-218ENST00000514493 ZNF790Q6PG37 636 aa25.27■■□□□ 1.64
SSBP2-218ENST00000514493 FRAT1Q92837 279 aaPredicted RBP25.26■■□□□ 1.63
SSBP2-218ENST00000514493 MRPL50Q8N5N7 158 aaKnown RBP25.26■■□□□ 1.63
SSBP2-218ENST00000514493 C20orf194Q5TEA3 1177 aa25.25■■□□□ 1.63
SSBP2-218ENST00000514493 EXOC6Q8TAG9 804 aa25.25■■□□□ 1.63
SSBP2-218ENST00000514493 SLC39A6Q13433 755 aa25.24■■□□□ 1.63
SSBP2-218ENST00000514493 KCPQ6ZWJ8 1503 aa25.24■■□□□ 1.63
SSBP2-218ENST00000514493 ZKSCAN2Q63HK3 967 aa25.23■■□□□ 1.63
SSBP2-218ENST00000514493 PDE3AQ14432 1141 aa25.23■■□□□ 1.63
SSBP2-218ENST00000514493 CRBNQ96SW2 442 aa25.23■■□□□ 1.63
SSBP2-218ENST00000514493 ONECUT3O60422 494 aaPredicted RBP25.22■■□□□ 1.63
SSBP2-218ENST00000514493 TTC5Q8N0Z6 440 aa25.22■■□□□ 1.63
SSBP2-218ENST00000514493 MARCH10Q8NA82 808 aaPredicted RBP25.22■■□□□ 1.63
SSBP2-218ENST00000514493 RGS12O14924 1447 aa25.21■■□□□ 1.63
SSBP2-218ENST00000514493 TCERG1O14776 1098 aaKnown RBP25.21■■□□□ 1.63
SSBP2-218ENST00000514493 TMOD3Q9NYL9 352 aa25.21■■□□□ 1.63
SSBP2-218ENST00000514493 NOB1Q9ULX3 412 aaKnown RBP25.21■■□□□ 1.63
SSBP2-218ENST00000514493 BCL9O00512 1426 aa25.21■■□□□ 1.63
SSBP2-218ENST00000514493 CCDC30Q5VVM6 783 aa25.21■■□□□ 1.63
SSBP2-218ENST00000514493 SEPT12Q8IYM1 358 aa25.21■■□□□ 1.63
SSBP2-218ENST00000514493 IPO8O15397 1037 aaKnown RBP25.19■■□□□ 1.62
SSBP2-218ENST00000514493 GIGYF1O75420 1035 aaPredicted RBP25.19■■□□□ 1.62
SSBP2-218ENST00000514493 ATF7IPQ6VMQ6 1270 aa25.19■■□□□ 1.62
SSBP2-218ENST00000514493 A0A0G2JS52 829 aa25.18■■□□□ 1.62
SSBP2-218ENST00000514493 MYT1Q01538 1121 aa25.18■■□□□ 1.62
SSBP2-218ENST00000514493 HDGFL1Q5TGJ6 251 aa25.18■■□□□ 1.62
SSBP2-218ENST00000514493 B4GALNT3Q6L9W6 998 aa25.18■■□□□ 1.62
SSBP2-218ENST00000514493 CHMP4AQ9BY43 222 aa25.18■■□□□ 1.62
SSBP2-218ENST00000514493 TRIM27P14373 513 aa25.18■■□□□ 1.62
SSBP2-218ENST00000514493 ZNF496Q96IT1 587 aaPredicted RBP25.18■■□□□ 1.62
SSBP2-218ENST00000514493 STK31Q9BXU1 1019 aa25.18■■□□□ 1.62
SSBP2-218ENST00000514493 ARHGAP45Q92619 1136 aa25.17■■□□□ 1.62
SSBP2-218ENST00000514493 FMNL2Q96PY5 1086 aa25.17■■□□□ 1.62
SSBP2-218ENST00000514493 MS4A1P11836 297 aa25.16■■□□□ 1.62
SSBP2-218ENST00000514493 PIGBQ92521 554 aa25.16■■□□□ 1.62
SSBP2-218ENST00000514493 TNNQ9UQP3 1299 aa25.16■■□□□ 1.62
SSBP2-218ENST00000514493 BRWD3Q6RI45 1802 aa25.16■■□□□ 1.62
SSBP2-218ENST00000514493 CCDC136Q96JN2 1154 aa25.16■■□□□ 1.62
SSBP2-218ENST00000514493 N4BP2Q86UW6 1770 aaPredicted RBP25.15■■□□□ 1.62
SSBP2-218ENST00000514493 RLBP1P12271 317 aa25.15■■□□□ 1.62
SSBP2-218ENST00000514493 DZIP1LQ8IYY4 767 aaKnown RBP25.15■■□□□ 1.62
SSBP2-218ENST00000514493 PANK1Q8TE04 598 aa25.15■■□□□ 1.62
SSBP2-218ENST00000514493 NHSQ6T4R5 1651 aa25.15■■□□□ 1.62
SSBP2-218ENST00000514493 SBF2Q86WG5 1849 aa25.14■■□□□ 1.62
SSBP2-218ENST00000514493 SLC4A2P04920 1241 aa25.14■■□□□ 1.62
SSBP2-218ENST00000514493 FTSJ3Q8IY81 847 aaKnown RBP25.14■■□□□ 1.62
SSBP2-218ENST00000514493 NECTIN2Q92692 538 aa25.13■■□□□ 1.61
SSBP2-218ENST00000514493 PRAMEF22A3QJZ6 481 aa25.13■■□□□ 1.61
SSBP2-218ENST00000514493 EIF2S2P20042 333 aaKnown RBP25.13■■□□□ 1.61
SSBP2-218ENST00000514493 FAM182BQ5T319 152 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms