RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 SMIM5Q71RC9 77 aa11.81□□□□□ -0.52
HERC4-214ENST00000513996 AMIGO3Q86WK7 504 aa11.81□□□□□ -0.52
HERC4-214ENST00000513996 SMARCC1Q92922 1105 aaPredicted RBP11.81□□□□□ -0.52
HERC4-214ENST00000513996 MTFR1LQ9H019 292 aa11.81□□□□□ -0.52
HERC4-214ENST00000513996 TMOD3Q9NYL9 352 aa11.81□□□□□ -0.52
HERC4-214ENST00000513996 TFCP2L1Q9NZI6 479 aa11.81□□□□□ -0.52
HERC4-214ENST00000513996 ITGB4P16144 1822 aa11.81□□□□□ -0.52
HERC4-214ENST00000513996 KDM6AO15550 1401 aaPredicted RBP11.8□□□□□ -0.52
HERC4-214ENST00000513996 COL23A1Q86Y22 540 aaPredicted RBP11.8□□□□□ -0.52
HERC4-214ENST00000513996 DCAF5Q96JK2 942 aa11.8□□□□□ -0.52
HERC4-214ENST00000513996 SLC4A9Q96Q91 983 aa11.8□□□□□ -0.52
HERC4-214ENST00000513996 COL3A1P02461 1466 aaPredicted RBP11.79□□□□□ -0.52
HERC4-214ENST00000513996 LOC102724428A0A0B4J2F2 783 aa11.79□□□□□ -0.52
HERC4-214ENST00000513996 HSP90AB1P08238 724 aaKnown RBP11.79□□□□□ -0.52
HERC4-214ENST00000513996 PPP2R1AP30153 589 aa11.79□□□□□ -0.52
HERC4-214ENST00000513996 SIK1P57059 783 aa11.79□□□□□ -0.52
HERC4-214ENST00000513996 ITPK1Q13572 414 aa11.79□□□□□ -0.52
HERC4-214ENST00000513996 LGR6Q9HBX8 967 aa11.79□□□□□ -0.52
HERC4-214ENST00000513996 PPP1R1BQ9UD71 204 aaPredicted RBP11.79□□□□□ -0.52
HERC4-214ENST00000513996 MTHFSDQ2M296 383 aaKnown RBP11.78□□□□□ -0.52
HERC4-214ENST00000513996 C1orf141Q5JVX7 400 aa11.78□□□□□ -0.52
HERC4-214ENST00000513996 LINC00116Q8NCU8 138 aa11.78□□□□□ -0.52
HERC4-214ENST00000513996 SLC16A10Q8TF71 515 aa11.78□□□□□ -0.52
HERC4-214ENST00000513996 U2SURPO15042 1029 aaKnown RBP11.77□□□□□ -0.53
HERC4-214ENST00000513996 CABP4P57796 275 aa11.77□□□□□ -0.53
HERC4-214ENST00000513996 AKAP4Q5JQC9 854 aa11.77□□□□□ -0.53
HERC4-214ENST00000513996 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.53
HERC4-214ENST00000513996 RNMTO43148 476 aaKnown RBP11.76□□□□□ -0.53
HERC4-214ENST00000513996 ATP6V1AP38606 617 aa11.76□□□□□ -0.53
HERC4-214ENST00000513996 FHDC1Q9C0D6 1143 aaPredicted RBP11.76□□□□□ -0.53
HERC4-214ENST00000513996 TUBGCP6Q96RT7 1819 aa11.75□□□□□ -0.53
HERC4-214ENST00000513996 ARXQ96QS3 562 aa11.75□□□□□ -0.53
HERC4-214ENST00000513996 SYT17Q9BSW7 474 aa11.75□□□□□ -0.53
HERC4-214ENST00000513996 RBM42Q9BTD8 480 aaKnown RBP11.75□□□□□ -0.53
HERC4-214ENST00000513996 DDX10Q13206 875 aaKnown RBP11.74□□□□□ -0.53
HERC4-214ENST00000513996 MSL1Q68DK7 614 aa11.74□□□□□ -0.53
HERC4-214ENST00000513996 PHACTR3Q96KR7 559 aa11.74□□□□□ -0.53
HERC4-214ENST00000513996 RSPH6AQ9H0K4 717 aa11.74□□□□□ -0.53
HERC4-214ENST00000513996 TAF1LQ8IZX4 1826 aa11.74□□□□□ -0.53
HERC4-214ENST00000513996 PTCD1O75127 700 aaKnown RBP11.73□□□□□ -0.53
HERC4-214ENST00000513996 AK7Q96M32 723 aa11.73□□□□□ -0.53
HERC4-214ENST00000513996 CFAP53Q96M91 514 aa11.73□□□□□ -0.53
HERC4-214ENST00000513996 SLC52A2Q9HAB3 445 aa11.73□□□□□ -0.53
HERC4-214ENST00000513996 QSER1Q2KHR3 1735 aa11.72□□□□□ -0.53
HERC4-214ENST00000513996 C5P01031 1676 aa11.72□□□□□ -0.53
HERC4-214ENST00000513996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.72□□□□□ -0.53
HERC4-214ENST00000513996 PHF14O94880 888 aa11.72□□□□□ -0.53
HERC4-214ENST00000513996 PRKAR2BP31323 418 aa11.72□□□□□ -0.53
HERC4-214ENST00000513996 SLC39A6Q13433 755 aa11.72□□□□□ -0.53
HERC4-214ENST00000513996 IL17REQ8NFR9 667 aa11.72□□□□□ -0.53
HERC4-214ENST00000513996 ZBTB12Q9Y330 459 aaPredicted RBP11.72□□□□□ -0.53
HERC4-214ENST00000513996 C4BP0C0L5 1744 aa11.72□□□□□ -0.53
HERC4-214ENST00000513996 GNPATO15228 680 aa11.71□□□□□ -0.53
HERC4-214ENST00000513996 U2AF1L5P0DN76 240 aaPredicted RBP11.71□□□□□ -0.53
HERC4-214ENST00000513996 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
HERC4-214ENST00000513996 U2AF1Q01081 240 aaKnown RBP eCLIP11.71□□□□□ -0.535e-7■■■■□ 20.1
HERC4-214ENST00000513996 FLAD1Q8NFF5 587 aa11.71□□□□□ -0.53
HERC4-214ENST00000513996 NUDCQ9Y266 331 aa11.71□□□□□ -0.53
HERC4-214ENST00000513996 SSFA2P28290 1259 aa11.7□□□□□ -0.54
HERC4-214ENST00000513996 POLD1P28340 1107 aa11.7□□□□□ -0.54
HERC4-214ENST00000513996 RC3H1Q5TC82 1133 aaKnown RBP11.7□□□□□ -0.54
HERC4-214ENST00000513996 SCN11AQ9UI33 1791 aa11.69□□□□□ -0.54
HERC4-214ENST00000513996 COL24A1Q17RW2 1714 aa11.69□□□□□ -0.54
HERC4-214ENST00000513996 GNAT3A8MTJ3 354 aa11.69□□□□□ -0.54
HERC4-214ENST00000513996 FCHSD2O94868 740 aa11.69□□□□□ -0.54
HERC4-214ENST00000513996 GAS2L2Q8NHY3 880 aa11.69□□□□□ -0.54
HERC4-214ENST00000513996 UBR3Q6ZT12 1888 aa11.68□□□□□ -0.54
HERC4-214ENST00000513996 RPS6KA4O75676 772 aa11.68□□□□□ -0.54
HERC4-214ENST00000513996 CRKLP46109 303 aaKnown RBP11.68□□□□□ -0.54
HERC4-214ENST00000513996 MKRN4PQ13434 485 aaPredicted RBP11.68□□□□□ -0.54
HERC4-214ENST00000513996 DNAJC10Q8IXB1 793 aa11.68□□□□□ -0.54
HERC4-214ENST00000513996 NLGN2Q8NFZ4 835 aa11.68□□□□□ -0.54
HERC4-214ENST00000513996 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
HERC4-214ENST00000513996 MAP3K5Q99683 1374 aa11.67□□□□□ -0.54
HERC4-214ENST00000513996 CNTNAP4Q9C0A0 1308 aa11.67□□□□□ -0.54
HERC4-214ENST00000513996 MYH14Q7Z406 1995 aaKnown RBP11.67□□□□□ -0.54
HERC4-214ENST00000513996 TRAPPC3LQ5T215 181 aa11.67□□□□□ -0.54
HERC4-214ENST00000513996 INTS5Q6P9B9 1019 aaKnown RBP11.67□□□□□ -0.54
HERC4-214ENST00000513996 KLHL34Q8N239 644 aa11.67□□□□□ -0.54
HERC4-214ENST00000513996 RTCBQ9Y3I0 505 aaKnown RBP11.67□□□□□ -0.54
HERC4-214ENST00000513996 MRC1P22897 1456 aa11.67□□□□□ -0.54
HERC4-214ENST00000513996 ADAMTS7Q9UKP4 1686 aa11.67□□□□□ -0.54
HERC4-214ENST00000513996 KCNQ3O43525 872 aa11.66□□□□□ -0.54
HERC4-214ENST00000513996 CYP19A1P11511 503 aaPredicted RBP11.65□□□□□ -0.54
HERC4-214ENST00000513996 DCTN1Q14203 1278 aa11.65□□□□□ -0.54
HERC4-214ENST00000513996 RALBP1Q15311 655 aa11.65□□□□□ -0.54
HERC4-214ENST00000513996 PLEKHF1Q96S99 279 aa11.65□□□□□ -0.54
HERC4-214ENST00000513996 CEMIPQ8WUJ3 1361 aa11.65□□□□□ -0.55
HERC4-214ENST00000513996 ZNF831Q5JPB2 1677 aa11.65□□□□□ -0.55
HERC4-214ENST00000513996 GYS1P13807 737 aa11.64□□□□□ -0.55
HERC4-214ENST00000513996 TEFQ10587 303 aa11.64□□□□□ -0.55
HERC4-214ENST00000513996 MCM10Q7L590 875 aa11.64□□□□□ -0.55
HERC4-214ENST00000513996 ZNF496Q96IT1 587 aaPredicted RBP11.64□□□□□ -0.55
HERC4-214ENST00000513996 SRP68Q9UHB9 627 aaKnown RBP11.64□□□□□ -0.55
HERC4-214ENST00000513996 KCPQ6ZWJ8 1503 aa11.64□□□□□ -0.55
HERC4-214ENST00000513996 MMP10P09238 476 aa11.63□□□□□ -0.55
HERC4-214ENST00000513996 RFC4P35249 363 aa11.63□□□□□ -0.55
HERC4-214ENST00000513996 ZNF790Q6PG37 636 aa11.63□□□□□ -0.55
HERC4-214ENST00000513996 CCDC87Q9NVE4 849 aa11.63□□□□□ -0.55
HERC4-214ENST00000513996 COL5A3P25940 1745 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms