RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 CC2D1BQ5T0F9 858 aaKnown RBP9.86□□□□□ -0.83
HTT-212ENST00000513639 KLHL34Q8N239 644 aa9.86□□□□□ -0.83
HTT-212ENST00000513639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.85□□□□□ -0.83
HTT-212ENST00000513639 GRIN3BO60391 1043 aa9.85□□□□□ -0.83
HTT-212ENST00000513639 AKAP4Q5JQC9 854 aa9.85□□□□□ -0.83
HTT-212ENST00000513639 TRAPPC3LQ5T215 181 aa9.85□□□□□ -0.83
HTT-212ENST00000513639 RC3H1Q5TC82 1133 aaKnown RBP9.85□□□□□ -0.83
HTT-212ENST00000513639 AEBP1Q8IUX7 1158 aa9.85□□□□□ -0.83
HTT-212ENST00000513639 NFATC2IPQ8NCF5 419 aa9.85□□□□□ -0.83
HTT-212ENST00000513639 RBM42Q9BTD8 480 aaKnown RBP9.85□□□□□ -0.83
HTT-212ENST00000513639 CD2APQ9Y5K6 639 aa9.85□□□□□ -0.83
HTT-212ENST00000513639 CASZ1Q86V15 1759 aa9.85□□□□□ -0.83
HTT-212ENST00000513639 RTCBQ9Y3I0 505 aaKnown RBP9.84□□□□□ -0.83
HTT-212ENST00000513639 NPC1L1Q9UHC9 1359 aa9.84□□□□□ -0.83
HTT-212ENST00000513639 PAPPAQ13219 1627 aa9.83□□□□□ -0.84
HTT-212ENST00000513639 GNPATO15228 680 aa9.83□□□□□ -0.84
HTT-212ENST00000513639 PHF14O94880 888 aa9.83□□□□□ -0.84
HTT-212ENST00000513639 NLGN1Q8N2Q7 840 aa9.83□□□□□ -0.84
HTT-212ENST00000513639 LINC00116Q8NCU8 138 aa9.83□□□□□ -0.84
HTT-212ENST00000513639 KDRP35968 1356 aa9.83□□□□□ -0.84
HTT-212ENST00000513639 GOLGB1Q14789 3259 aaKnown RBP9.83□□□□□ -0.84
HTT-212ENST00000513639 ITPK1Q13572 414 aa9.82□□□□□ -0.84
HTT-212ENST00000513639 MSL1Q68DK7 614 aa9.82□□□□□ -0.84
HTT-212ENST00000513639 CFAP53Q96M91 514 aa9.82□□□□□ -0.84
HTT-212ENST00000513639 DOT1LQ8TEK3 1739 aa9.82□□□□□ -0.84
HTT-212ENST00000513639 PTCD1O75127 700 aaKnown RBP9.81□□□□□ -0.84
HTT-212ENST00000513639 RPS6KA4O75676 772 aa9.81□□□□□ -0.84
HTT-212ENST00000513639 HMOX1P09601 288 aa9.81□□□□□ -0.84
HTT-212ENST00000513639 ATXN8OSP0DMR3 200 aa9.81□□□□□ -0.84
HTT-212ENST00000513639 RFC4P35249 363 aa9.81□□□□□ -0.84
HTT-212ENST00000513639 CNGB1Q14028 1251 aaPredicted RBP9.81□□□□□ -0.84
HTT-212ENST00000513639 PELP1Q8IZL8 1130 aaKnown RBP9.81□□□□□ -0.84
HTT-212ENST00000513639 NUDCQ9Y266 331 aa9.81□□□□□ -0.84
HTT-212ENST00000513639 LY75O60449 1722 aa9.81□□□□□ -0.84
HTT-212ENST00000513639 SHANK3Q9BYB0 1731 aa9.81□□□□□ -0.84
HTT-212ENST00000513639 ANKRD26Q9UPS8 1709 aa9.81□□□□□ -0.84
HTT-212ENST00000513639 U2SURPO15042 1029 aaKnown RBP9.8□□□□□ -0.84
HTT-212ENST00000513639 SLC52A2Q9HAB3 445 aa9.8□□□□□ -0.84
HTT-212ENST00000513639 LGR6Q9HBX8 967 aa9.8□□□□□ -0.84
HTT-212ENST00000513639 PKD1L3Q7Z443 1732 aa9.79□□□□□ -0.84
HTT-212ENST00000513639 RNMTO43148 476 aaKnown RBP9.79□□□□□ -0.84
HTT-212ENST00000513639 MTHFSDQ2M296 383 aaKnown RBP9.79□□□□□ -0.84
HTT-212ENST00000513639 NLGN2Q8NFZ4 835 aa9.79□□□□□ -0.84
HTT-212ENST00000513639 GAS2L2Q8NHY3 880 aa9.79□□□□□ -0.84
HTT-212ENST00000513639 ARHGEF1Q92888 912 aaKnown RBP9.79□□□□□ -0.84
HTT-212ENST00000513639 SLC4A9Q96Q91 983 aa9.79□□□□□ -0.84
HTT-212ENST00000513639 CNTNAP4Q9C0A0 1308 aa9.79□□□□□ -0.84
HTT-212ENST00000513639 SMIM5Q71RC9 77 aa9.78□□□□□ -0.84
HTT-212ENST00000513639 AMIGO3Q86WK7 504 aa9.78□□□□□ -0.84
HTT-212ENST00000513639 ZNF784Q8NCA9 323 aaPredicted RBP9.78□□□□□ -0.84
HTT-212ENST00000513639 QSER1Q2KHR3 1735 aa9.77□□□□□ -0.85
HTT-212ENST00000513639 GNAT3A8MTJ3 354 aa9.77□□□□□ -0.85
HTT-212ENST00000513639 MMP10P09238 476 aa9.77□□□□□ -0.85
HTT-212ENST00000513639 CRKLP46109 303 aaKnown RBP9.77□□□□□ -0.85
HTT-212ENST00000513639 TGFB2P61812 414 aa9.77□□□□□ -0.85
HTT-212ENST00000513639 TEFQ10587 303 aa9.77□□□□□ -0.85
HTT-212ENST00000513639 VSIG10Q8N0Z9 540 aa9.77□□□□□ -0.85
HTT-212ENST00000513639 TEX13AQ9BXU3 409 aaPredicted RBP9.77□□□□□ -0.85
HTT-212ENST00000513639 PARP3Q9Y6F1 533 aa9.77□□□□□ -0.85
HTT-212ENST00000513639 KDM6AO15550 1401 aaPredicted RBP9.76□□□□□ -0.85
HTT-212ENST00000513639 ZPR1O75312 459 aa9.76□□□□□ -0.85
HTT-212ENST00000513639 FCHSD2O94868 740 aa9.76□□□□□ -0.85
HTT-212ENST00000513639 STARD3NLO95772 234 aa9.76□□□□□ -0.85
HTT-212ENST00000513639 TTC5Q8N0Z6 440 aa9.76□□□□□ -0.85
HTT-212ENST00000513639 ITGB4P16144 1822 aa9.76□□□□□ -0.85
HTT-212ENST00000513639 U2AF1L5P0DN76 240 aaPredicted RBP9.75□□□□□ -0.85
HTT-212ENST00000513639 GYS1P13807 737 aa9.75□□□□□ -0.85
HTT-212ENST00000513639 PPP2R1AP30153 589 aa9.75□□□□□ -0.85
HTT-212ENST00000513639 U2AF1Q01081 240 aaKnown RBP eCLIP9.75□□□□□ -0.85
HTT-212ENST00000513639 SLC39A6Q13433 755 aa9.75□□□□□ -0.85
HTT-212ENST00000513639 INTS5Q6P9B9 1019 aaKnown RBP9.75□□□□□ -0.85
HTT-212ENST00000513639 CCDC87Q9NVE4 849 aa9.75□□□□□ -0.85
HTT-212ENST00000513639 C4BP0C0L5 1744 aa9.75□□□□□ -0.85
HTT-212ENST00000513639 C5P01031 1676 aa9.74□□□□□ -0.85
HTT-212ENST00000513639 NEFMP07197 916 aa9.74□□□□□ -0.85
HTT-212ENST00000513639 CYP19A1P11511 503 aaPredicted RBP9.74□□□□□ -0.85
HTT-212ENST00000513639 YBX3P16989 372 aaKnown RBP eCLIP9.74□□□□□ -0.85
HTT-212ENST00000513639 NPM2Q86SE8 214 aaKnown RBP9.74□□□□□ -0.85
HTT-212ENST00000513639 DNAJC10Q8IXB1 793 aa9.74□□□□□ -0.85
HTT-212ENST00000513639 IL17REQ8NFR9 667 aa9.74□□□□□ -0.85
HTT-212ENST00000513639 RTF1Q92541 710 aaKnown RBP9.74□□□□□ -0.85
HTT-212ENST00000513639 PNNQ9H307 717 aaKnown RBP9.74□□□□□ -0.85
HTT-212ENST00000513639 A0A087WZG4 1122 aa9.73□□□□□ -0.85
HTT-212ENST00000513639 HTATSF1O43719 755 aaKnown RBP9.73□□□□□ -0.85
HTT-212ENST00000513639 ZNF790Q6PG37 636 aa9.73□□□□□ -0.85
HTT-212ENST00000513639 TOGARAM1Q9Y4F4 1720 aa9.73□□□□□ -0.85
HTT-212ENST00000513639 PRKAR2BP31323 418 aa9.72□□□□□ -0.85
HTT-212ENST00000513639 PHACTR3Q96KR7 559 aa9.72□□□□□ -0.85
HTT-212ENST00000513639 FMNL2Q96PY5 1086 aa9.72□□□□□ -0.85
HTT-212ENST00000513639 NARFQ9UHQ1 456 aa9.72□□□□□ -0.85
HTT-212ENST00000513639 COL24A1Q17RW2 1714 aa9.72□□□□□ -0.85
HTT-212ENST00000513639 TAF1LQ8IZX4 1826 aa9.72□□□□□ -0.85
HTT-212ENST00000513639 A0A0G2JLW4 131 aa9.71□□□□□ -0.86
HTT-212ENST00000513639 BTBD11A6QL63 1104 aa9.71□□□□□ -0.86
HTT-212ENST00000513639 TM4SF1P30408 202 aa9.71□□□□□ -0.86
HTT-212ENST00000513639 FKBP8Q14318 412 aa9.71□□□□□ -0.86
HTT-212ENST00000513639 RSPH6AQ9H0K4 717 aa9.71□□□□□ -0.86
HTT-212ENST00000513639 USP42Q9H9J4 1324 aaKnown RBP9.71□□□□□ -0.86
HTT-212ENST00000513639 CANXP27824 592 aaKnown RBP9.7□□□□□ -0.86
HTT-212ENST00000513639 USPL1Q5W0Q7 1092 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms