RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 LSM11P83369 360 aaKnown RBP eCLIP7.46□□□□□ -1.22
HTT-211ENST00000513326 FAM182BQ5T319 152 aa7.46□□□□□ -1.22
HTT-211ENST00000513326 RIC3Q7Z5B4 369 aa7.46□□□□□ -1.22
HTT-211ENST00000513326 SLF2Q8IX21 1173 aa7.46□□□□□ -1.22
HTT-211ENST00000513326 PLCH1Q4KWH8 1693 aa7.45□□□□□ -1.22
HTT-211ENST00000513326 SPTLC1O15269 473 aa7.45□□□□□ -1.22
HTT-211ENST00000513326 YY1P25490 414 aa7.45□□□□□ -1.22
HTT-211ENST00000513326 USP46P62068 366 aa7.45□□□□□ -1.22
HTT-211ENST00000513326 FAM50AQ14320 339 aaKnown RBP7.45□□□□□ -1.22
HTT-211ENST00000513326 TUSC1Q2TAM9 212 aa7.45□□□□□ -1.22
HTT-211ENST00000513326 ZNF326Q5BKZ1 582 aaKnown RBP7.45□□□□□ -1.22
HTT-211ENST00000513326 ESCO1Q5FWF5 840 aa7.45□□□□□ -1.22
HTT-211ENST00000513326 ADGRD1Q6QNK2 874 aa7.45□□□□□ -1.22
HTT-211ENST00000513326 MRPL50Q8N5N7 158 aaKnown RBP7.45□□□□□ -1.22
HTT-211ENST00000513326 CABLES1Q8TDN4 633 aa7.45□□□□□ -1.22
HTT-211ENST00000513326 SLC10A3P09131 477 aa7.44□□□□□ -1.22
HTT-211ENST00000513326 SF3B2Q13435 895 aaKnown RBP7.44□□□□□ -1.22
HTT-211ENST00000513326 RSBN1LQ6PCB5 846 aaPredicted RBP7.44□□□□□ -1.22
HTT-211ENST00000513326 SAMD7Q7Z3H4 446 aa7.44□□□□□ -1.22
HTT-211ENST00000513326 KRT27Q7Z3Y8 459 aa7.44□□□□□ -1.22
HTT-211ENST00000513326 ZFRQ96KR1 1074 aaKnown RBP7.44□□□□□ -1.22
HTT-211ENST00000513326 LIMD1Q9UGP4 676 aa7.44□□□□□ -1.22
HTT-211ENST00000513326 CDC42BPGQ6DT37 1551 aa7.44□□□□□ -1.22
HTT-211ENST00000513326 ABCA3Q99758 1704 aa7.44□□□□□ -1.22
HTT-211ENST00000513326 TNS1Q9HBL0 1735 aaKnown RBP7.44□□□□□ -1.22
HTT-211ENST00000513326 MOXD2PA6NHM9 499 aa7.43□□□□□ -1.22
HTT-211ENST00000513326 NPHP3Q7Z494 1330 aa7.43□□□□□ -1.22
HTT-211ENST00000513326 NUP155O75694 1391 aa7.43□□□□□ -1.22
HTT-211ENST00000513326 PRAG1Q86YV5 1406 aa7.43□□□□□ -1.22
HTT-211ENST00000513326 CAMTA1Q9Y6Y1 1673 aa7.42□□□□□ -1.22
HTT-211ENST00000513326 NRAPQ86VF7 1730 aa7.42□□□□□ -1.22
HTT-211ENST00000513326 VPS72Q15906 364 aa7.42□□□□□ -1.22
HTT-211ENST00000513326 PPP2R2DQ66LE6 453 aa7.42□□□□□ -1.22
HTT-211ENST00000513326 NECTIN2Q92692 538 aa7.42□□□□□ -1.22
HTT-211ENST00000513326 ZMYND15Q9H091 742 aa7.42□□□□□ -1.22
HTT-211ENST00000513326 SPATA31A3Q5VYP0 1347 aa7.42□□□□□ -1.22
HTT-211ENST00000513326 PLEKHH1Q9ULM0 1364 aa7.42□□□□□ -1.22
HTT-211ENST00000513326 NAIPQ13075 1403 aa7.42□□□□□ -1.22
HTT-211ENST00000513326 HOXA2O43364 376 aa7.41□□□□□ -1.22
HTT-211ENST00000513326 HRO43593 1189 aa7.41□□□□□ -1.22
HTT-211ENST00000513326 NDUFV2P19404 249 aa7.41□□□□□ -1.22
HTT-211ENST00000513326 BAG6P46379 1132 aa7.41□□□□□ -1.22
HTT-211ENST00000513326 EZH2Q15910 746 aaKnown RBP7.41□□□□□ -1.22
HTT-211ENST00000513326 STAC3Q96MF2 364 aa7.41□□□□□ -1.22
HTT-211ENST00000513326 CCDC9Q9Y3X0 531 aaKnown RBP7.41□□□□□ -1.22
HTT-211ENST00000513326 RGPD1P0DJD0 1748 aa7.41□□□□□ -1.22
HTT-211ENST00000513326 A0A0G2JS52 829 aa7.4□□□□□ -1.22
HTT-211ENST00000513326 RNF40O75150 1001 aa7.4□□□□□ -1.22
HTT-211ENST00000513326 RFC5P40937 340 aa7.4□□□□□ -1.22
HTT-211ENST00000513326 MYT1Q01538 1121 aa7.4□□□□□ -1.22
HTT-211ENST00000513326 GRIPAP1Q4V328 841 aa7.4□□□□□ -1.22
HTT-211ENST00000513326 TMEM259Q4ZIN3 620 aa7.4□□□□□ -1.22
HTT-211ENST00000513326 ANKRD13DQ6ZTN6 518 aa7.4□□□□□ -1.22
HTT-211ENST00000513326 WAPLQ7Z5K2 1190 aa7.4□□□□□ -1.22
HTT-211ENST00000513326 LRCH3Q96II8 777 aa7.4□□□□□ -1.22
HTT-211ENST00000513326 HFM1A2PYH4 1435 aa7.4□□□□□ -1.22
HTT-211ENST00000513326 NWD2Q9ULI1 1742 aa7.4□□□□□ -1.23
HTT-211ENST00000513326 DISP2A7MBM2 1401 aa7.39□□□□□ -1.23
HTT-211ENST00000513326 FAM83GA6ND36 823 aa7.39□□□□□ -1.23
HTT-211ENST00000513326 CFHP08603 1231 aa7.39□□□□□ -1.23
HTT-211ENST00000513326 CSPP1Q1MSJ5 1256 aa7.39□□□□□ -1.23
HTT-211ENST00000513326 PRPF38BQ5VTL8 546 aaKnown RBP7.39□□□□□ -1.23
HTT-211ENST00000513326 BANK1Q8NDB2 785 aa7.39□□□□□ -1.23
HTT-211ENST00000513326 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.39□□□□□ -1.23
HTT-211ENST00000513326 FMN2Q9NZ56 1722 aa7.38□□□□□ -1.23
HTT-211ENST00000513326 THSD7AQ9UPZ6 1657 aa7.38□□□□□ -1.23
HTT-211ENST00000513326 TNS3Q68CZ2 1445 aa7.38□□□□□ -1.23
HTT-211ENST00000513326 GOLGA8CPA6NN73 597 aa7.38□□□□□ -1.23
HTT-211ENST00000513326 LILRB3O75022 631 aa7.38□□□□□ -1.23
HTT-211ENST00000513326 FDX1P10109 184 aa7.38□□□□□ -1.23
HTT-211ENST00000513326 MCM6Q14566 821 aa7.38□□□□□ -1.23
HTT-211ENST00000513326 ANKK1Q8NFD2 765 aa7.38□□□□□ -1.23
HTT-211ENST00000513326 CAMKK2Q96RR4 588 aa7.38□□□□□ -1.23
HTT-211ENST00000513326 PCDHB15Q9Y5E8 787 aa7.38□□□□□ -1.23
HTT-211ENST00000513326 RGPD8O14715 1765 aaPredicted RBP7.38□□□□□ -1.23
HTT-211ENST00000513326 NUP188Q5SRE5 1749 aa7.38□□□□□ -1.23
HTT-211ENST00000513326 FUT2Q10981 343 aa7.37□□□□□ -1.23
HTT-211ENST00000513326 QPCTQ16769 361 aa7.37□□□□□ -1.23
HTT-211ENST00000513326 KMT5BQ4FZB7 885 aa7.37□□□□□ -1.23
HTT-211ENST00000513326 KRT28Q7Z3Y7 464 aa7.37□□□□□ -1.23
HTT-211ENST00000513326 ZBTB3Q9H5J0 574 aa7.37□□□□□ -1.23
HTT-211ENST00000513326 STK26Q9P289 416 aa7.37□□□□□ -1.23
HTT-211ENST00000513326 RREB1Q92766 1687 aa7.37□□□□□ -1.23
HTT-211ENST00000513326 CCDC144AA2RUR9 1427 aa7.36□□□□□ -1.23
HTT-211ENST00000513326 PPLO60437 1756 aa7.36□□□□□ -1.23
HTT-211ENST00000513326 ROCK1Q13464 1354 aa7.36□□□□□ -1.23
HTT-211ENST00000513326 KIF1AQ12756 1690 aa7.36□□□□□ -1.23
HTT-211ENST00000513326 SPDYE5A6NIY4 337 aa7.36□□□□□ -1.23
HTT-211ENST00000513326 TRIM37O94972 964 aa7.36□□□□□ -1.23
HTT-211ENST00000513326 ATP6V1AP38606 617 aa7.36□□□□□ -1.23
HTT-211ENST00000513326 PRR14Q9BWN1 585 aa7.36□□□□□ -1.23
HTT-211ENST00000513326 KIF1BO60333 1816 aa7.36□□□□□ -1.23
HTT-211ENST00000513326 SOWAHBA6NEL2 793 aa7.35□□□□□ -1.23
HTT-211ENST00000513326 ITGAEP38570 1179 aa7.35□□□□□ -1.23
HTT-211ENST00000513326 BTG4Q9NY30 223 aa7.35□□□□□ -1.23
HTT-211ENST00000513326 PCDHGC3Q9UN70 934 aa7.35□□□□□ -1.23
HTT-211ENST00000513326 TECPR2O15040 1411 aa7.35□□□□□ -1.23
HTT-211ENST00000513326 LRPPRCP42704 1394 aaKnown RBP7.34□□□□□ -1.23
HTT-211ENST00000513326 SPATA31A5Q5VU36 1347 aa7.34□□□□□ -1.23
HTT-211ENST00000513326 SPATA31A7Q8IWB4 1347 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms