RNA–Protein interactions for RNA: ENST00000513316.1

RAB3C-204, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB3C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-204ENST00000513316 UNC13AQ9UPW8 1703 aa10.1□□□□□ -0.79
RAB3C-204ENST00000513316 TMEM229AB2RXF0 380 aa10.1□□□□□ -0.79
RAB3C-204ENST00000513316 BACH1O14867 736 aa10.1□□□□□ -0.79
RAB3C-204ENST00000513316 TPCN2Q8NHX9 752 aa10.1□□□□□ -0.79
RAB3C-204ENST00000513316 RAB6BQ9NRW1 208 aa10.1□□□□□ -0.79
RAB3C-204ENST00000513316 M0R2N6 131 aa10.09□□□□□ -0.79
RAB3C-204ENST00000513316 MEN1O00255 615 aa10.09□□□□□ -0.79
RAB3C-204ENST00000513316 IL2RAP01589 272 aa10.09□□□□□ -0.79
RAB3C-204ENST00000513316 CDCA8Q53HL2 280 aa10.09□□□□□ -0.79
RAB3C-204ENST00000513316 ANKMY2Q8IV38 441 aa10.09□□□□□ -0.79
RAB3C-204ENST00000513316 ZNF594Q96JF6 807 aaPredicted RBP10.09□□□□□ -0.79
RAB3C-204ENST00000513316 INSM2Q96T92 566 aaPredicted RBP10.09□□□□□ -0.79
RAB3C-204ENST00000513316 HRH3Q9Y5N1 445 aa10.09□□□□□ -0.79
RAB3C-204ENST00000513316 SOS2Q07890 1332 aaPredicted RBP10.08□□□□□ -0.8
RAB3C-204ENST00000513316 ACIN1Q9UKV3 1341 aaKnown RBP10.08□□□□□ -0.8
RAB3C-204ENST00000513316 DKK1O94907 266 aa10.08□□□□□ -0.8
RAB3C-204ENST00000513316 RNF144AP50876 292 aaPredicted RBP10.08□□□□□ -0.8
RAB3C-204ENST00000513316 SEC13P55735 322 aa10.08□□□□□ -0.8
RAB3C-204ENST00000513316 SLC4A9Q96Q91 983 aa10.08□□□□□ -0.8
RAB3C-204ENST00000513316 POLMQ9NP87 494 aaPredicted RBP10.08□□□□□ -0.8
RAB3C-204ENST00000513316 SHROOM4Q9ULL8 1493 aa10.07□□□□□ -0.8
RAB3C-204ENST00000513316 TTLL8A6PVC2 850 aa10.07□□□□□ -0.8
RAB3C-204ENST00000513316 TRIM47Q96LD4 638 aa10.07□□□□□ -0.8
RAB3C-204ENST00000513316 ZNF358Q9NW07 568 aa10.07□□□□□ -0.8
RAB3C-204ENST00000513316 STAU1O95793 577 aaKnown RBP10.06□□□□□ -0.8
RAB3C-204ENST00000513316 CTSOP43234 321 aaPredicted RBP10.06□□□□□ -0.8
RAB3C-204ENST00000513316 DPYDQ12882 1025 aa10.06□□□□□ -0.8
RAB3C-204ENST00000513316 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.06□□□□□ -0.8
RAB3C-204ENST00000513316 FAM200AQ8TCP9 573 aa10.06□□□□□ -0.8
RAB3C-204ENST00000513316 ARXQ96QS3 562 aa10.06□□□□□ -0.8
RAB3C-204ENST00000513316 GMPR2Q9P2T1 348 aaKnown RBP10.06□□□□□ -0.8
RAB3C-204ENST00000513316 NOVA2Q9UNW9 492 aaKnown RBP10.06□□□□□ -0.8
RAB3C-204ENST00000513316 SMTNP53814 917 aa10.05□□□□□ -0.8
RAB3C-204ENST00000513316 CENPCQ03188 943 aa10.05□□□□□ -0.8
RAB3C-204ENST00000513316 FOXD4L5Q5VV16 416 aaPredicted RBP10.05□□□□□ -0.8
RAB3C-204ENST00000513316 MTFR1Q15390 333 aa10.04□□□□□ -0.8
RAB3C-204ENST00000513316 TLR1Q15399 786 aa10.04□□□□□ -0.8
RAB3C-204ENST00000513316 SLC27A3Q5K4L6 730 aa10.04□□□□□ -0.8
RAB3C-204ENST00000513316 RNF217Q8TC41 542 aa10.04□□□□□ -0.8
RAB3C-204ENST00000513316 FHDC1Q9C0D6 1143 aaPredicted RBP10.04□□□□□ -0.8
RAB3C-204ENST00000513316 GRIP2Q9C0E4 1043 aa10.04□□□□□ -0.8
RAB3C-204ENST00000513316 SERTAD1Q9UHV2 236 aa10.04□□□□□ -0.8
RAB3C-204ENST00000513316 A6NJY4 79 aa10.03□□□□□ -0.8
RAB3C-204ENST00000513316 SFI1A8K8P3 1242 aa10.03□□□□□ -0.8
RAB3C-204ENST00000513316 GTF2E1P29083 439 aaPredicted RBP10.03□□□□□ -0.8
RAB3C-204ENST00000513316 ZSCAN10Q96SZ4 725 aaPredicted RBP10.03□□□□□ -0.8
RAB3C-204ENST00000513316 C11orf95C9JLR9 678 aaPredicted RBP10.02□□□□□ -0.81
RAB3C-204ENST00000513316 MAN1A2O60476 641 aa10.02□□□□□ -0.81
RAB3C-204ENST00000513316 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.02□□□□□ -0.81
RAB3C-204ENST00000513316 LYSMD3Q7Z3D4 306 aa10.02□□□□□ -0.81
RAB3C-204ENST00000513316 NBPF15Q8N660 670 aa10.02□□□□□ -0.81
RAB3C-204ENST00000513316 ZMIZ1Q9ULJ6 1067 aa10.02□□□□□ -0.81
RAB3C-204ENST00000513316 SCRIBQ14160 1630 aa10.02□□□□□ -0.81
RAB3C-204ENST00000513316 SPATA31C2B4DYI2 1134 aa10.01□□□□□ -0.81
RAB3C-204ENST00000513316 SWI5Q1ZZU3 235 aa10.01□□□□□ -0.81
RAB3C-204ENST00000513316 DNMT3LQ9UJW3 386 aa10.01□□□□□ -0.81
RAB3C-204ENST00000513316 CDK2AP1O14519 115 aa10□□□□□ -0.81
RAB3C-204ENST00000513316 EPHA4P54764 986 aa10□□□□□ -0.81
RAB3C-204ENST00000513316 WDR44Q5JSH3 913 aa10□□□□□ -0.81
RAB3C-204ENST00000513316 PPARGC1BQ86YN6 1023 aaKnown RBP10□□□□□ -0.81
RAB3C-204ENST00000513316 CSB-PGBD3P0DP91 1061 aa9.99□□□□□ -0.81
RAB3C-204ENST00000513316 TMEM214Q6NUQ4 689 aaKnown RBP9.99□□□□□ -0.81
RAB3C-204ENST00000513316 TSEN2Q8NCE0 465 aaKnown RBP9.99□□□□□ -0.81
RAB3C-204ENST00000513316 SCHIP1Q9P0W5 487 aaPredicted RBP9.99□□□□□ -0.81
RAB3C-204ENST00000513316 BICRAQ9NZM4 1560 aa9.99□□□□□ -0.81
RAB3C-204ENST00000513316 FIGNL2A6NMB9 653 aa9.98□□□□□ -0.81
RAB3C-204ENST00000513316 FOXK2Q01167 660 aa9.98□□□□□ -0.81
RAB3C-204ENST00000513316 GNASQ5JWF2 1037 aa9.98□□□□□ -0.81
RAB3C-204ENST00000513316 TMEM164Q5U3C3 297 aa9.98□□□□□ -0.81
RAB3C-204ENST00000513316 PRICKLE2Q7Z3G6 844 aa9.98□□□□□ -0.81
RAB3C-204ENST00000513316 RHBDD1Q8TEB9 315 aa9.98□□□□□ -0.81
RAB3C-204ENST00000513316 STK32AQ8WU08 396 aa9.98□□□□□ -0.81
RAB3C-204ENST00000513316 SNRPBP14678 240 aaKnown RBP9.97□□□□□ -0.81
RAB3C-204ENST00000513316 PDE4CQ08493 712 aa9.97□□□□□ -0.81
RAB3C-204ENST00000513316 TAS1R3Q7RTX0 852 aa9.97□□□□□ -0.81
RAB3C-204ENST00000513316 TNS4Q8IZW8 715 aa9.97□□□□□ -0.81
RAB3C-204ENST00000513316 GAS2L2Q8NHY3 880 aa9.97□□□□□ -0.81
RAB3C-204ENST00000513316 HINFPQ9BQA5 517 aa9.97□□□□□ -0.81
RAB3C-204ENST00000513316 IQSEC3Q9UPP2 1182 aaPredicted RBP9.97□□□□□ -0.81
RAB3C-204ENST00000513316 USTQ9Y2C2 406 aa9.97□□□□□ -0.81
RAB3C-204ENST00000513316 NIFKQ9BYG3 293 aaKnown RBP9.96□□□□□ -0.82
RAB3C-204ENST00000513316 POTECB2RU33 542 aa9.95□□□□□ -0.82
RAB3C-204ENST00000513316 FAM69CQ0P6D2 419 aa9.95□□□□□ -0.82
RAB3C-204ENST00000513316 ZNF787Q6DD87 383 aa9.95□□□□□ -0.82
RAB3C-204ENST00000513316 NBPF10Q6P3W6 841 aaKnown RBP9.95□□□□□ -0.82
RAB3C-204ENST00000513316 CLP1Q92989 425 aaKnown RBP9.95□□□□□ -0.82
RAB3C-204ENST00000513316 POU4F2Q12837 409 aa9.94□□□□□ -0.82
RAB3C-204ENST00000513316 SLC9A9Q8IVB4 645 aa9.94□□□□□ -0.82
RAB3C-204ENST00000513316 TMEM88BA6NKF7 163 aa9.93□□□□□ -0.82
RAB3C-204ENST00000513316 SOBPA7XYQ1 873 aa9.93□□□□□ -0.82
RAB3C-204ENST00000513316 IGFBP4P22692 258 aa9.93□□□□□ -0.82
RAB3C-204ENST00000513316 PSMA6P60900 246 aaKnown RBP9.93□□□□□ -0.82
RAB3C-204ENST00000513316 C4orf17Q53FE4 359 aa9.93□□□□□ -0.82
RAB3C-204ENST00000513316 ZNF295-AS1Q8N0V1 137 aa9.93□□□□□ -0.82
RAB3C-204ENST00000513316 STAG2Q8N3U4 1231 aa9.93□□□□□ -0.82
RAB3C-204ENST00000513316 TSPAN10Q9H1Z9 355 aaPredicted RBP9.93□□□□□ -0.82
RAB3C-204ENST00000513316 CHMP3Q9Y3E7 222 aa9.93□□□□□ -0.82
RAB3C-204ENST00000513316 WEE1P30291 646 aa9.92□□□□□ -0.82
RAB3C-204ENST00000513316 TEAD4Q15561 434 aa9.92□□□□□ -0.82
RAB3C-204ENST00000513316 RETREG2Q8NC44 543 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms