RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 ADRA2BP18089 450 aa15.01□□□□□ -0.01
SKP2-207ENST00000513263 PLEKHO1Q53GL0 409 aaPredicted RBP15.01□□□□□ -0.01
SKP2-207ENST00000513263 CEP350Q5VT06 3117 aa15.01□□□□□ -0.01
SKP2-207ENST00000513263 ATP6V1AP38606 617 aa15□□□□□ -0.01
SKP2-207ENST00000513263 C1QTNF8P60827 252 aa15□□□□□ -0.01
SKP2-207ENST00000513263 BRCA1P38398 1863 aaKnown RBP14.99□□□□□ -0.01
SKP2-207ENST00000513263 GNPATO15228 680 aa14.99□□□□□ -0.01
SKP2-207ENST00000513263 PHF14O94880 888 aa14.99□□□□□ -0.01
SKP2-207ENST00000513263 HSPA5P11021 654 aaKnown RBP14.99□□□□□ -0.01
SKP2-207ENST00000513263 TNNT2P45379 298 aaPredicted RBP14.99□□□□□ -0.01
SKP2-207ENST00000513263 C1orf141Q5JVX7 400 aa14.99□□□□□ -0.01
SKP2-207ENST00000513263 PANK3Q9H999 370 aa14.99□□□□□ -0.01
SKP2-207ENST00000513263 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
SKP2-207ENST00000513263 MYH14Q7Z406 1995 aaKnown RBP14.98□□□□□ -0.01
SKP2-207ENST00000513263 MORC1Q86VD1 984 aa14.98□□□□□ -0.01
SKP2-207ENST00000513263 LINC00116Q8NCU8 138 aa14.98□□□□□ -0.01
SKP2-207ENST00000513263 ARFGEF1Q9Y6D6 1849 aa14.98□□□□□ -0.01
SKP2-207ENST00000513263 CNTNAP4Q9C0A0 1308 aa14.97□□□□□ -0.01
SKP2-207ENST00000513263 YBX3P16989 372 aaKnown RBP eCLIP14.97□□□□□ -0.013e-9■□□□□ 9.8
SKP2-207ENST00000513263 CCER1Q8TC90 406 aaPredicted RBP14.97□□□□□ -0.01
SKP2-207ENST00000513263 ASAP1Q9ULH1 1129 aa14.97□□□□□ -0.01
SKP2-207ENST00000513263 RTCBQ9Y3I0 505 aaKnown RBP14.97□□□□□ -0.01
SKP2-207ENST00000513263 TJP1Q07157 1748 aa14.97□□□□□ -0.01
SKP2-207ENST00000513263 KIAA1551Q9HCM1 1747 aa14.97□□□□□ -0.01
SKP2-207ENST00000513263 KDM6AO15550 1401 aaPredicted RBP14.96□□□□□ -0.01
SKP2-207ENST00000513263 RC3H1Q5TC82 1133 aaKnown RBP14.96□□□□□ -0.01
SKP2-207ENST00000513263 ZNF530Q6P9A1 599 aaPredicted RBP14.96□□□□□ -0.01
SKP2-207ENST00000513263 ATG3Q9NT62 314 aa14.96□□□□□ -0.01
SKP2-207ENST00000513263 N4BP2Q86UW6 1770 aaPredicted RBP14.96□□□□□ -0.02
SKP2-207ENST00000513263 SENP3-EIF4A1A0A087X0R7 540 aa14.95□□□□□ -0.02
SKP2-207ENST00000513263 TRAPPC3LQ5T215 181 aa14.95□□□□□ -0.02
SKP2-207ENST00000513263 NLGN1Q8N2Q7 840 aa14.95□□□□□ -0.02
SKP2-207ENST00000513263 ADCY9O60503 1353 aa14.95□□□□□ -0.02
SKP2-207ENST00000513263 ATP10DQ9P241 1426 aa14.94□□□□□ -0.02
SKP2-207ENST00000513263 CABP4P57796 275 aa14.94□□□□□ -0.02
SKP2-207ENST00000513263 ITPK1Q13572 414 aa14.94□□□□□ -0.02
SKP2-207ENST00000513263 MRC1P22897 1456 aa14.94□□□□□ -0.02
SKP2-207ENST00000513263 ADAMTS7Q9UKP4 1686 aa14.93□□□□□ -0.02
SKP2-207ENST00000513263 C10orf71Q711Q0 1435 aa14.93□□□□□ -0.02
SKP2-207ENST00000513263 MTHFSP49914 203 aa14.93□□□□□ -0.02
SKP2-207ENST00000513263 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
SKP2-207ENST00000513263 UBR2Q8IWV8 1755 aa14.91□□□□□ -0.02
SKP2-207ENST00000513263 PXDNLA1KZ92 1463 aa14.91□□□□□ -0.02
SKP2-207ENST00000513263 MMP10P09238 476 aa14.91□□□□□ -0.02
SKP2-207ENST00000513263 RFC4P35249 363 aa14.91□□□□□ -0.02
SKP2-207ENST00000513263 TGFB2P61812 414 aa14.91□□□□□ -0.02
SKP2-207ENST00000513263 AMIGO3Q86WK7 504 aa14.91□□□□□ -0.02
SKP2-207ENST00000513263 GPBP1L1Q9HC44 474 aaPredicted RBP14.91□□□□□ -0.02
SKP2-207ENST00000513263 CCDC87Q9NVE4 849 aa14.91□□□□□ -0.02
SKP2-207ENST00000513263 SULT6B1Q6IMI4 303 aa14.9□□□□□ -0.02
SKP2-207ENST00000513263 RPS6KA4O75676 772 aa14.89□□□□□ -0.03
SKP2-207ENST00000513263 AKAP4Q5JQC9 854 aa14.89□□□□□ -0.03
SKP2-207ENST00000513263 PARP3Q9Y6F1 533 aa14.88□□□□□ -0.03
SKP2-207ENST00000513263 DLEC1Q9Y238 1755 aa14.88□□□□□ -0.03
SKP2-207ENST00000513263 NPC1L1Q9UHC9 1359 aa14.87□□□□□ -0.03
SKP2-207ENST00000513263 IL13P35225 146 aa14.87□□□□□ -0.03
SKP2-207ENST00000513263 AMER1Q5JTC6 1135 aaPredicted RBP14.87□□□□□ -0.03
SKP2-207ENST00000513263 AEBP1Q8IUX7 1158 aa14.87□□□□□ -0.03
SKP2-207ENST00000513263 KIF7Q2M1P5 1343 aa14.87□□□□□ -0.03
SKP2-207ENST00000513263 SIPA1L3O60292 1781 aaPredicted RBP14.86□□□□□ -0.03
SKP2-207ENST00000513263 AFDNP55196 1824 aaKnown RBP14.86□□□□□ -0.03
SKP2-207ENST00000513263 GYS1P13807 737 aa14.85□□□□□ -0.03
SKP2-207ENST00000513263 NFATC2IPQ8NCF5 419 aa14.85□□□□□ -0.03
SKP2-207ENST00000513263 ARHGEF1Q92888 912 aaKnown RBP14.85□□□□□ -0.03
SKP2-207ENST00000513263 SLC4A9Q96Q91 983 aa14.85□□□□□ -0.03
SKP2-207ENST00000513263 USP42Q9H9J4 1324 aaKnown RBP14.85□□□□□ -0.03
SKP2-207ENST00000513263 TNRC6CQ9HCJ0 1690 aaKnown RBP14.84□□□□□ -0.03
SKP2-207ENST00000513263 NRXN2Q9P2S2 1712 aa14.84□□□□□ -0.03
SKP2-207ENST00000513263 PTCD1O75127 700 aaKnown RBP14.84□□□□□ -0.03
SKP2-207ENST00000513263 CRKLP46109 303 aaKnown RBP14.84□□□□□ -0.03
SKP2-207ENST00000513263 SLC52A2Q9HAB3 445 aa14.84□□□□□ -0.03
SKP2-207ENST00000513263 KCPQ6ZWJ8 1503 aa14.83□□□□□ -0.04
SKP2-207ENST00000513263 SBF1O95248 1867 aa14.83□□□□□ -0.04
SKP2-207ENST00000513263 DIAPH1O60610 1272 aaKnown RBP14.83□□□□□ -0.04
SKP2-207ENST00000513263 SCN7AQ01118 1682 aa14.83□□□□□ -0.04
SKP2-207ENST00000513263 ZPR1O75312 459 aa14.82□□□□□ -0.04
SKP2-207ENST00000513263 SMIM5Q71RC9 77 aa14.82□□□□□ -0.04
SKP2-207ENST00000513263 VSIG10Q8N0Z9 540 aa14.82□□□□□ -0.04
SKP2-207ENST00000513263 BCS1LQ9Y276 419 aa14.82□□□□□ -0.04
SKP2-207ENST00000513263 COL15A1P39059 1388 aa14.81□□□□□ -0.04
SKP2-207ENST00000513263 COL3A1P02461 1466 aaPredicted RBP14.81□□□□□ -0.04
SKP2-207ENST00000513263 PIM2Q9P1W9 311 aa14.8□□□□□ -0.04
SKP2-207ENST00000513263 RNMTO43148 476 aaKnown RBP14.79□□□□□ -0.04
SKP2-207ENST00000513263 HSPA6P17066 643 aa14.79□□□□□ -0.04
SKP2-207ENST00000513263 SOS1Q07889 1333 aaPredicted RBP14.79□□□□□ -0.04
SKP2-207ENST00000513263 TTC5Q8N0Z6 440 aa14.79□□□□□ -0.04
SKP2-207ENST00000513263 GAS2L2Q8NHY3 880 aa14.79□□□□□ -0.04
SKP2-207ENST00000513263 ZC3H4Q9UPT8 1303 aaKnown RBP14.78□□□□□ -0.04
SKP2-207ENST00000513263 FCHSD2O94868 740 aa14.78□□□□□ -0.04
SKP2-207ENST00000513263 ZNF526Q8TF50 670 aaPredicted RBP14.78□□□□□ -0.04
SKP2-207ENST00000513263 CCDC88AQ3V6T2 1871 aa14.78□□□□□ -0.04
SKP2-207ENST00000513263 BCORQ6W2J9 1755 aa14.78□□□□□ -0.04
SKP2-207ENST00000513263 A0A0G2JLW4 131 aa14.77□□□□□ -0.05
SKP2-207ENST00000513263 PER1O15534 1290 aaPredicted RBP14.77□□□□□ -0.05
SKP2-207ENST00000513263 STARD3NLO95772 234 aa14.77□□□□□ -0.05
SKP2-207ENST00000513263 HMOX1P09601 288 aa14.77□□□□□ -0.05
SKP2-207ENST00000513263 DPEP1P16444 411 aa14.77□□□□□ -0.05
SKP2-207ENST00000513263 DALRD3Q5D0E6 543 aaKnown RBP14.77□□□□□ -0.05
SKP2-207ENST00000513263 TEX13AQ9BXU3 409 aaPredicted RBP14.77□□□□□ -0.05
SKP2-207ENST00000513263 WWC3Q9ULE0 1092 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms