RNA–Protein interactions for RNA: ENST00000512966.1

SH3TC1-222, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-222ENST00000512966 WNK3Q9BYP7 1800 aa22.03■■□□□ 1.12
SH3TC1-222ENST00000512966 TSPYL6Q8N831 410 aa22.03■■□□□ 1.12
SH3TC1-222ENST00000512966 ATRNO75882 1429 aa22.03■■□□□ 1.12
SH3TC1-222ENST00000512966 SHANK3Q9BYB0 1731 aa22.03■■□□□ 1.12
SH3TC1-222ENST00000512966 CABP4P57796 275 aa22.02■■□□□ 1.12
SH3TC1-222ENST00000512966 GJD4Q96KN9 370 aaPredicted RBP22.02■■□□□ 1.12
SH3TC1-222ENST00000512966 GTF3C3Q9Y5Q9 886 aa22.02■■□□□ 1.12
SH3TC1-222ENST00000512966 SCN11AQ9UI33 1791 aa22.02■■□□□ 1.11
SH3TC1-222ENST00000512966 BCAR3O75815 825 aa22.01■■□□□ 1.11
SH3TC1-222ENST00000512966 NFATC2IPQ8NCF5 419 aa22.01■■□□□ 1.11
SH3TC1-222ENST00000512966 BRPF1P55201 1214 aaPredicted RBP22■■□□□ 1.11
SH3TC1-222ENST00000512966 EIF4A1P60842 406 aaKnown RBP22■■□□□ 1.11
SH3TC1-222ENST00000512966 FAM98CQ17RN3 349 aaKnown RBP22■■□□□ 1.11
SH3TC1-222ENST00000512966 ELL2O00472 640 aaPredicted RBP21.98■■□□□ 1.11
SH3TC1-222ENST00000512966 ONECUT3O60422 494 aaPredicted RBP21.98■■□□□ 1.11
SH3TC1-222ENST00000512966 HOXB7P09629 217 aa21.98■■□□□ 1.11
SH3TC1-222ENST00000512966 SSH1Q8WYL5 1049 aa21.98■■□□□ 1.11
SH3TC1-222ENST00000512966 CHMP4AQ9BY43 222 aa21.98■■□□□ 1.11
SH3TC1-222ENST00000512966 SIPA1L3O60292 1781 aaPredicted RBP21.97■■□□□ 1.11
SH3TC1-222ENST00000512966 KRT24Q2M2I5 525 aa21.97■■□□□ 1.11
SH3TC1-222ENST00000512966 ERICH6BQ5W0A0 696 aa21.97■■□□□ 1.11
SH3TC1-222ENST00000512966 ZNF790Q6PG37 636 aa21.96■■□□□ 1.11
SH3TC1-222ENST00000512966 QTRT2Q9H974 415 aaKnown RBP21.96■■□□□ 1.11
SH3TC1-222ENST00000512966 SMC4Q9NTJ3 1288 aa21.96■■□□□ 1.11
SH3TC1-222ENST00000512966 KDM3BQ7LBC6 1761 aa21.96■■□□□ 1.11
SH3TC1-222ENST00000512966 HEG1Q9ULI3 1381 aa21.96■■□□□ 1.11
SH3TC1-222ENST00000512966 KCNQ3O43525 872 aa21.95■■□□□ 1.1
SH3TC1-222ENST00000512966 FKBP8Q14318 412 aa21.95■■□□□ 1.1
SH3TC1-222ENST00000512966 ZNF772Q68DY9 489 aaPredicted RBP21.95■■□□□ 1.1
SH3TC1-222ENST00000512966 VIRMAQ69YN4 1812 aaKnown RBP21.94■■□□□ 1.1
SH3TC1-222ENST00000512966 MARCH10Q8NA82 808 aaPredicted RBP21.94■■□□□ 1.1
SH3TC1-222ENST00000512966 GLI3P10071 1580 aa21.94■■□□□ 1.1
SH3TC1-222ENST00000512966 PLIN1O60240 522 aa21.93■■□□□ 1.1
SH3TC1-222ENST00000512966 MRPL50Q8N5N7 158 aaKnown RBP21.93■■□□□ 1.1
SH3TC1-222ENST00000512966 KIF16BQ96L93 1317 aa21.93■■□□□ 1.1
SH3TC1-222ENST00000512966 PDE3AQ14432 1141 aa21.92■■□□□ 1.1
SH3TC1-222ENST00000512966 TTC5Q8N0Z6 440 aa21.92■■□□□ 1.1
SH3TC1-222ENST00000512966 BCL2L13Q9BXK5 485 aa21.92■■□□□ 1.1
SH3TC1-222ENST00000512966 TMOD3Q9NYL9 352 aa21.92■■□□□ 1.1
SH3TC1-222ENST00000512966 THSD7AQ9UPZ6 1657 aa21.91■■□□□ 1.1
SH3TC1-222ENST00000512966 IPO8O15397 1037 aaKnown RBP21.91■■□□□ 1.1
SH3TC1-222ENST00000512966 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
SH3TC1-222ENST00000512966 SLC39A6Q13433 755 aa21.91■■□□□ 1.1
SH3TC1-222ENST00000512966 CCDC30Q5VVM6 783 aa21.91■■□□□ 1.1
SH3TC1-222ENST00000512966 MS4A1P11836 297 aa21.9■■□□□ 1.1
SH3TC1-222ENST00000512966 CANXP27824 592 aaKnown RBP21.9■■□□□ 1.1
SH3TC1-222ENST00000512966 ZKSCAN2Q63HK3 967 aa21.9■■□□□ 1.1
SH3TC1-222ENST00000512966 ARHGAP45Q92619 1136 aa21.9■■□□□ 1.1
SH3TC1-222ENST00000512966 FMNL2Q96PY5 1086 aa21.9■■□□□ 1.1
SH3TC1-222ENST00000512966 IRX6P78412 446 aaPredicted RBP21.89■■□□□ 1.09
SH3TC1-222ENST00000512966 FRAT1Q92837 279 aaPredicted RBP21.89■■□□□ 1.09
SH3TC1-222ENST00000512966 A0A0G2JS52 829 aa21.88■■□□□ 1.09
SH3TC1-222ENST00000512966 MYT1Q01538 1121 aa21.88■■□□□ 1.09
SH3TC1-222ENST00000512966 PIGBQ92521 554 aa21.88■■□□□ 1.09
SH3TC1-222ENST00000512966 NOB1Q9ULX3 412 aaKnown RBP21.88■■□□□ 1.09
SH3TC1-222ENST00000512966 BCL9O00512 1426 aa21.88■■□□□ 1.09
SH3TC1-222ENST00000512966 TOGARAM1Q9Y4F4 1720 aa21.87■■□□□ 1.09
SH3TC1-222ENST00000512966 ZNF496Q96IT1 587 aaPredicted RBP21.87■■□□□ 1.09
SH3TC1-222ENST00000512966 STK31Q9BXU1 1019 aa21.87■■□□□ 1.09
SH3TC1-222ENST00000512966 SNRPA1P09661 255 aaKnown RBP21.86■■□□□ 1.09
SH3TC1-222ENST00000512966 HDGFL1Q5TGJ6 251 aa21.86■■□□□ 1.09
SH3TC1-222ENST00000512966 ATF7IPQ6VMQ6 1270 aa21.86■■□□□ 1.09
SH3TC1-222ENST00000512966 SEPT12Q8IYM1 358 aa21.86■■□□□ 1.09
SH3TC1-222ENST00000512966 PRIM1P49642 420 aaKnown RBP21.85■■□□□ 1.09
SH3TC1-222ENST00000512966 RBM6P78332 1123 aaKnown RBP21.85■■□□□ 1.09
SH3TC1-222ENST00000512966 TCERG1O14776 1098 aaKnown RBP21.84■■□□□ 1.09
SH3TC1-222ENST00000512966 SLC4A2P04920 1241 aa21.84■■□□□ 1.09
SH3TC1-222ENST00000512966 C20orf194Q5TEA3 1177 aa21.84■■□□□ 1.09
SH3TC1-222ENST00000512966 PTPRCP08575 1304 aa21.83■■□□□ 1.09
SH3TC1-222ENST00000512966 ATG3Q9NT62 314 aa21.83■■□□□ 1.09
SH3TC1-222ENST00000512966 PAPPAQ13219 1627 aa21.83■■□□□ 1.08
SH3TC1-222ENST00000512966 TRIM27P14373 513 aa21.82■■□□□ 1.08
SH3TC1-222ENST00000512966 EIF2S2P20042 333 aaKnown RBP21.82■■□□□ 1.08
SH3TC1-222ENST00000512966 DZIP1LQ8IYY4 767 aaKnown RBP21.82■■□□□ 1.08
SH3TC1-222ENST00000512966 VSIG10Q8N0Z9 540 aa21.82■■□□□ 1.08
SH3TC1-222ENST00000512966 API5Q9BZZ5 524 aaKnown RBP21.82■■□□□ 1.08
SH3TC1-222ENST00000512966 SYTL4Q96C24 671 aaPredicted RBP21.81■■□□□ 1.08
SH3TC1-222ENST00000512966 DBF4Q9UBU7 674 aaPredicted RBP21.81■■□□□ 1.08
SH3TC1-222ENST00000512966 ASAP1Q9ULH1 1129 aa21.81■■□□□ 1.08
SH3TC1-222ENST00000512966 KCPQ6ZWJ8 1503 aa21.8■■□□□ 1.08
SH3TC1-222ENST00000512966 CRBNQ96SW2 442 aa21.8■■□□□ 1.08
SH3TC1-222ENST00000512966 PRAMEF22A3QJZ6 481 aa21.79■■□□□ 1.08
SH3TC1-222ENST00000512966 FTSJ3Q8IY81 847 aaKnown RBP21.79■■□□□ 1.08
SH3TC1-222ENST00000512966 EXOC6Q8TAG9 804 aa21.79■■□□□ 1.08
SH3TC1-222ENST00000512966 ACSBG1Q96GR2 724 aa21.79■■□□□ 1.08
SH3TC1-222ENST00000512966 TEX13AQ9BXU3 409 aaPredicted RBP21.79■■□□□ 1.08
SH3TC1-222ENST00000512966 UBR2Q8IWV8 1755 aa21.79■■□□□ 1.08
SH3TC1-222ENST00000512966 ITGB4P16144 1822 aa21.78■■□□□ 1.08
SH3TC1-222ENST00000512966 PANK1Q8TE04 598 aa21.78■■□□□ 1.08
SH3TC1-222ENST00000512966 NECTIN2Q92692 538 aa21.78■■□□□ 1.08
SH3TC1-222ENST00000512966 ERBB4Q15303 1308 aa21.78■■□□□ 1.08
SH3TC1-222ENST00000512966 DOT1LQ8TEK3 1739 aa21.77■■□□□ 1.08
SH3TC1-222ENST00000512966 RLBP1P12271 317 aa21.77■■□□□ 1.08
SH3TC1-222ENST00000512966 SMARCC1Q92922 1105 aaPredicted RBP21.77■■□□□ 1.08
SH3TC1-222ENST00000512966 DDX21Q9NR30 783 aaKnown RBP eCLIP21.77■■□□□ 1.08
SH3TC1-222ENST00000512966 PPP4R2Q9NY27 417 aa21.77■■□□□ 1.08
SH3TC1-222ENST00000512966 CHPF2Q9P2E5 772 aa21.77■■□□□ 1.08
SH3TC1-222ENST00000512966 TNNQ9UQP3 1299 aa21.77■■□□□ 1.08
SH3TC1-222ENST00000512966 USP16Q9Y5T5 823 aa21.77■■□□□ 1.08
SH3TC1-222ENST00000512966 PTCD1O75127 700 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms