RNA–Protein interactions for RNA: ENST00000512876.5

MATR3-220, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-220ENST00000512876 ZNF831Q5JPB2 1677 aa22.89■■□□□ 1.25
MATR3-220ENST00000512876 MSL1Q68DK7 614 aa22.88■■□□□ 1.25
MATR3-220ENST00000512876 NPC1L1Q9UHC9 1359 aa22.88■■□□□ 1.25
MATR3-220ENST00000512876 SULT6B1Q6IMI4 303 aa22.87■■□□□ 1.25
MATR3-220ENST00000512876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.86■■□□□ 1.25
MATR3-220ENST00000512876 SSFA2P28290 1259 aa22.86■■□□□ 1.25
MATR3-220ENST00000512876 KLHL34Q8N239 644 aa22.86■■□□□ 1.25
MATR3-220ENST00000512876 NLGN2Q8NFZ4 835 aa22.86■■□□□ 1.25
MATR3-220ENST00000512876 MTHFSP49914 203 aa22.85■■□□□ 1.25
MATR3-220ENST00000512876 SLC4A9Q96Q91 983 aa22.85■■□□□ 1.25
MATR3-220ENST00000512876 ATP6V1AP38606 617 aa22.84■■□□□ 1.25
MATR3-220ENST00000512876 COL5A3P25940 1745 aaPredicted RBP22.82■■□□□ 1.24
MATR3-220ENST00000512876 CHD4Q14839 1912 aa22.82■■□□□ 1.24
MATR3-220ENST00000512876 PHF14O94880 888 aa22.82■■□□□ 1.24
MATR3-220ENST00000512876 C1orf141Q5JVX7 400 aa22.82■■□□□ 1.24
MATR3-220ENST00000512876 SMIM5Q71RC9 77 aa22.82■■□□□ 1.24
MATR3-220ENST00000512876 COL3A1P02461 1466 aaPredicted RBP22.81■■□□□ 1.24
MATR3-220ENST00000512876 GNPATO15228 680 aa22.81■■□□□ 1.24
MATR3-220ENST00000512876 CC2D1BQ5T0F9 858 aaKnown RBP22.81■■□□□ 1.24
MATR3-220ENST00000512876 CICQ96RK0 1608 aaPredicted RBP22.8■■□□□ 1.24
MATR3-220ENST00000512876 CABP4P57796 275 aa22.8■■□□□ 1.24
MATR3-220ENST00000512876 SCN11AQ9UI33 1791 aa22.79■■□□□ 1.24
MATR3-220ENST00000512876 GPR162Q16538 588 aa22.79■■□□□ 1.24
MATR3-220ENST00000512876 CD2APQ9Y5K6 639 aa22.79■■□□□ 1.24
MATR3-220ENST00000512876 MRC1P22897 1456 aa22.79■■□□□ 1.24
MATR3-220ENST00000512876 CNTNAP4Q9C0A0 1308 aa22.78■■□□□ 1.24
MATR3-220ENST00000512876 AKAP4Q5JQC9 854 aa22.76■■□□□ 1.23
MATR3-220ENST00000512876 RC3H1Q5TC82 1133 aaKnown RBP22.76■■□□□ 1.23
MATR3-220ENST00000512876 ZNF784Q8NCA9 323 aaPredicted RBP22.76■■□□□ 1.23
MATR3-220ENST00000512876 RBM42Q9BTD8 480 aaKnown RBP22.76■■□□□ 1.23
MATR3-220ENST00000512876 ADAMTS7Q9UKP4 1686 aa22.76■■□□□ 1.23
MATR3-220ENST00000512876 DIAPH1O60610 1272 aaKnown RBP22.75■■□□□ 1.23
MATR3-220ENST00000512876 NFATC2IPQ8NCF5 419 aa22.75■■□□□ 1.23
MATR3-220ENST00000512876 HMOX1P09601 288 aa22.74■■□□□ 1.23
MATR3-220ENST00000512876 YBX3P16989 372 aaKnown RBP eCLIP22.74■■□□□ 1.232e-9■■■■□ 20.8
MATR3-220ENST00000512876 RTCBQ9Y3I0 505 aaKnown RBP22.74■■□□□ 1.23
MATR3-220ENST00000512876 TJP1Q07157 1748 aa22.74■■□□□ 1.23
MATR3-220ENST00000512876 MYH14Q7Z406 1995 aaKnown RBP22.73■■□□□ 1.23
MATR3-220ENST00000512876 ADRA2BP18089 450 aa22.73■■□□□ 1.23
MATR3-220ENST00000512876 PELP1Q8IZL8 1130 aaKnown RBP22.72■■□□□ 1.23
MATR3-220ENST00000512876 SLC52A2Q9HAB3 445 aa22.72■■□□□ 1.23
MATR3-220ENST00000512876 RPS6KA4O75676 772 aa22.71■■□□□ 1.23
MATR3-220ENST00000512876 GRIN3BO60391 1043 aa22.7■■□□□ 1.22
MATR3-220ENST00000512876 PTCD1O75127 700 aaKnown RBP22.7■■□□□ 1.22
MATR3-220ENST00000512876 MTHFSDQ2M296 383 aaKnown RBP22.7■■□□□ 1.22
MATR3-220ENST00000512876 TRAPPC3LQ5T215 181 aa22.7■■□□□ 1.22
MATR3-220ENST00000512876 C4AP0C0L4 1744 aa22.7■■□□□ 1.22
MATR3-220ENST00000512876 RNMTO43148 476 aaKnown RBP22.69■■□□□ 1.22
MATR3-220ENST00000512876 LGR6Q9HBX8 967 aa22.69■■□□□ 1.22
MATR3-220ENST00000512876 MMP10P09238 476 aa22.68■■□□□ 1.22
MATR3-220ENST00000512876 ARHGEF1Q92888 912 aaKnown RBP22.68■■□□□ 1.22
MATR3-220ENST00000512876 KCPQ6ZWJ8 1503 aa22.67■■□□□ 1.22
MATR3-220ENST00000512876 VIRMAQ69YN4 1812 aaKnown RBP22.67■■□□□ 1.22
MATR3-220ENST00000512876 CRKLP46109 303 aaKnown RBP22.67■■□□□ 1.22
MATR3-220ENST00000512876 KIF13BQ9NQT8 1826 aa22.66■■□□□ 1.22
MATR3-220ENST00000512876 GYS1P13807 737 aa22.66■■□□□ 1.22
MATR3-220ENST00000512876 NLGN1Q8N2Q7 840 aa22.66■■□□□ 1.22
MATR3-220ENST00000512876 C10orf71Q711Q0 1435 aa22.65■■□□□ 1.22
MATR3-220ENST00000512876 KIAA1551Q9HCM1 1747 aa22.65■■□□□ 1.22
MATR3-220ENST00000512876 PXDNLA1KZ92 1463 aa22.63■■□□□ 1.21
MATR3-220ENST00000512876 RFC4P35249 363 aa22.63■■□□□ 1.21
MATR3-220ENST00000512876 CNGB1Q14028 1251 aaPredicted RBP22.63■■□□□ 1.21
MATR3-220ENST00000512876 UBR2Q8IWV8 1755 aa22.63■■□□□ 1.21
MATR3-220ENST00000512876 U2SURPO15042 1029 aaKnown RBP22.62■■□□□ 1.21
MATR3-220ENST00000512876 INTS5Q6P9B9 1019 aaKnown RBP22.62■■□□□ 1.21
MATR3-220ENST00000512876 USP42Q9H9J4 1324 aaKnown RBP22.61■■□□□ 1.21
MATR3-220ENST00000512876 SLC39A6Q13433 755 aa22.61■■□□□ 1.21
MATR3-220ENST00000512876 DNAJC10Q8IXB1 793 aa22.61■■□□□ 1.21
MATR3-220ENST00000512876 GAS2L2Q8NHY3 880 aa22.6■■□□□ 1.21
MATR3-220ENST00000512876 CCDC87Q9NVE4 849 aa22.59■■□□□ 1.21
MATR3-220ENST00000512876 SOS1Q07889 1333 aaPredicted RBP22.58■■□□□ 1.21
MATR3-220ENST00000512876 CYP19A1P11511 503 aaPredicted RBP22.58■■□□□ 1.21
MATR3-220ENST00000512876 VSIG10Q8N0Z9 540 aa22.58■■□□□ 1.21
MATR3-220ENST00000512876 RSPH6AQ9H0K4 717 aa22.58■■□□□ 1.21
MATR3-220ENST00000512876 SRP68Q9UHB9 627 aaKnown RBP22.58■■□□□ 1.21
MATR3-220ENST00000512876 ADCY9O60503 1353 aa22.58■■□□□ 1.21
MATR3-220ENST00000512876 SIPA1L3O60292 1781 aaPredicted RBP22.58■■□□□ 1.2
MATR3-220ENST00000512876 PPP2R1AP30153 589 aa22.57■■□□□ 1.2
MATR3-220ENST00000512876 CFAP53Q96M91 514 aa22.57■■□□□ 1.2
MATR3-220ENST00000512876 CEMIPQ8WUJ3 1361 aa22.57■■□□□ 1.2
MATR3-220ENST00000512876 GNAT3A8MTJ3 354 aa22.56■■□□□ 1.2
MATR3-220ENST00000512876 TGFB2P61812 414 aa22.56■■□□□ 1.2
MATR3-220ENST00000512876 IL17REQ8NFR9 667 aa22.56■■□□□ 1.2
MATR3-220ENST00000512876 FKBP8Q14318 412 aa22.55■■□□□ 1.2
MATR3-220ENST00000512876 PRKAR2BP31323 418 aa22.54■■□□□ 1.2
MATR3-220ENST00000512876 DDR1Q08345 913 aa22.54■■□□□ 1.2
MATR3-220ENST00000512876 PHACTR3Q96KR7 559 aa22.54■■□□□ 1.2
MATR3-220ENST00000512876 WWC3Q9ULE0 1092 aa22.54■■□□□ 1.2
MATR3-220ENST00000512876 ZBTB1Q9Y2K1 713 aa22.54■■□□□ 1.2
MATR3-220ENST00000512876 PARP3Q9Y6F1 533 aa22.54■■□□□ 1.2
MATR3-220ENST00000512876 N4BP2Q86UW6 1770 aaPredicted RBP22.53■■□□□ 1.2
MATR3-220ENST00000512876 COL15A1P39059 1388 aa22.53■■□□□ 1.2
MATR3-220ENST00000512876 ATP10DQ9P241 1426 aa22.53■■□□□ 1.2
MATR3-220ENST00000512876 BRCA1P38398 1863 aaKnown RBP22.52■■□□□ 1.2
MATR3-220ENST00000512876 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
MATR3-220ENST00000512876 TEFQ10587 303 aa22.51■■□□□ 1.19
MATR3-220ENST00000512876 ZNF790Q6PG37 636 aa22.51■■□□□ 1.19
MATR3-220ENST00000512876 TTC5Q8N0Z6 440 aa22.51■■□□□ 1.19
MATR3-220ENST00000512876 HEG1Q9ULI3 1381 aa22.5■■□□□ 1.19
MATR3-220ENST00000512876 TM4SF1P30408 202 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms