RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 POTEMA6NI47 508 aa11.51□□□□□ -0.57
RFC1-214ENST00000512726 INHAP05111 366 aa11.51□□□□□ -0.57
RFC1-214ENST00000512726 LCE2DQ5TA82 110 aaPredicted RBP11.51□□□□□ -0.57
RFC1-214ENST00000512726 CHMP7Q8WUX9 453 aaPredicted RBP11.51□□□□□ -0.57
RFC1-214ENST00000512726 SERTAD1Q9UHV2 236 aa11.51□□□□□ -0.57
RFC1-214ENST00000512726 ARID5BQ14865 1188 aa11.5□□□□□ -0.57
RFC1-214ENST00000512726 C16orf46Q6P387 395 aa11.5□□□□□ -0.57
RFC1-214ENST00000512726 CITED4Q96RK1 184 aa11.5□□□□□ -0.57
RFC1-214ENST00000512726 TSPAN10Q9H1Z9 355 aaPredicted RBP11.5□□□□□ -0.57
RFC1-214ENST00000512726 CYLDQ9NQC7 956 aa11.5□□□□□ -0.57
RFC1-214ENST00000512726 BRPF3Q9ULD4 1205 aa11.5□□□□□ -0.57
RFC1-214ENST00000512726 MPSTP25325 297 aa11.49□□□□□ -0.57
RFC1-214ENST00000512726 EPHA4P54764 986 aa11.49□□□□□ -0.57
RFC1-214ENST00000512726 TMC7Q7Z402 723 aa11.49□□□□□ -0.57
RFC1-214ENST00000512726 C8orf37Q96NL8 207 aa11.49□□□□□ -0.57
RFC1-214ENST00000512726 PPEF1O14829 653 aaPredicted RBP11.48□□□□□ -0.57
RFC1-214ENST00000512726 PPP1R12BO60237 982 aaPredicted RBP11.48□□□□□ -0.57
RFC1-214ENST00000512726 RECKO95980 971 aa11.48□□□□□ -0.57
RFC1-214ENST00000512726 FGD1P98174 961 aa11.48□□□□□ -0.57
RFC1-214ENST00000512726 ALKBH2Q6NS38 261 aa11.48□□□□□ -0.57
RFC1-214ENST00000512726 CYP2U1Q7Z449 544 aa11.48□□□□□ -0.57
RFC1-214ENST00000512726 EHBP1Q8NDI1 1231 aa11.48□□□□□ -0.57
RFC1-214ENST00000512726 SLC4A9Q96Q91 983 aa11.48□□□□□ -0.57
RFC1-214ENST00000512726 TMPRSS4Q9NRS4 437 aa11.48□□□□□ -0.57
RFC1-214ENST00000512726 STAU1O95793 577 aaKnown RBP11.47□□□□□ -0.57
RFC1-214ENST00000512726 P4HBP07237 508 aaKnown RBP11.47□□□□□ -0.57
RFC1-214ENST00000512726 FSHRP23945 695 aa11.47□□□□□ -0.57
RFC1-214ENST00000512726 SKOR1P84550 965 aa11.47□□□□□ -0.57
RFC1-214ENST00000512726 AAMPQ13685 434 aa11.47□□□□□ -0.57
RFC1-214ENST00000512726 TSNAXIP1Q2TAA8 658 aa11.47□□□□□ -0.57
RFC1-214ENST00000512726 ESCO1Q5FWF5 840 aa11.47□□□□□ -0.57
RFC1-214ENST00000512726 TMC1Q8TDI8 760 aa11.47□□□□□ -0.57
RFC1-214ENST00000512726 CDK15Q96Q40 435 aa11.47□□□□□ -0.57
RFC1-214ENST00000512726 KRTAP3-3Q9BYR6 98 aa11.47□□□□□ -0.57
RFC1-214ENST00000512726 KRTAP3-2Q9BYR7 98 aa11.47□□□□□ -0.57
RFC1-214ENST00000512726 ETNK1Q9HBU6 452 aa11.47□□□□□ -0.57
RFC1-214ENST00000512726 GNRH1P01148 92 aa11.46□□□□□ -0.57
RFC1-214ENST00000512726 STAG2Q8N3U4 1231 aa11.46□□□□□ -0.57
RFC1-214ENST00000512726 ANKLE1Q8NAG6 615 aa11.46□□□□□ -0.57
RFC1-214ENST00000512726 TREHO43280 583 aa11.45□□□□□ -0.58
RFC1-214ENST00000512726 GGCXP38435 758 aa11.45□□□□□ -0.58
RFC1-214ENST00000512726 ZC3H6P61129 1189 aaKnown RBP11.45□□□□□ -0.58
RFC1-214ENST00000512726 MYT1Q01538 1121 aa11.45□□□□□ -0.58
RFC1-214ENST00000512726 SAP130Q9H0E3 1048 aa11.45□□□□□ -0.58
RFC1-214ENST00000512726 A0A1W2PRU2 124 aa11.44□□□□□ -0.58
RFC1-214ENST00000512726 RNF223E7ERA6 249 aa11.44□□□□□ -0.58
RFC1-214ENST00000512726 ITGAEP38570 1179 aa11.44□□□□□ -0.58
RFC1-214ENST00000512726 ZNF784Q8NCA9 323 aaPredicted RBP11.44□□□□□ -0.58
RFC1-214ENST00000512726 SCHIP1Q9P0W5 487 aaPredicted RBP11.44□□□□□ -0.58
RFC1-214ENST00000512726 STIM2Q9P246 746 aa11.44□□□□□ -0.58
RFC1-214ENST00000512726 CHMP3Q9Y3E7 222 aa11.44□□□□□ -0.58
RFC1-214ENST00000512726 A6NJY4 79 aa11.43□□□□□ -0.58
RFC1-214ENST00000512726 EIF1AXP47813 144 aaKnown RBP11.43□□□□□ -0.58
RFC1-214ENST00000512726 FMR1Q06787 632 aaKnown RBP eCLIP11.43□□□□□ -0.58
RFC1-214ENST00000512726 SLC9A9Q8IVB4 645 aa11.43□□□□□ -0.58
RFC1-214ENST00000512726 DMRTB1Q96MA1 342 aa11.43□□□□□ -0.58
RFC1-214ENST00000512726 C2orf49Q9BVC5 232 aaPredicted RBP11.43□□□□□ -0.58
RFC1-214ENST00000512726 GRM5P41594 1212 aa11.42□□□□□ -0.58
RFC1-214ENST00000512726 RPIAP49247 311 aa11.42□□□□□ -0.58
RFC1-214ENST00000512726 FOXK2Q01167 660 aa11.42□□□□□ -0.58
RFC1-214ENST00000512726 PLCB3Q01970 1234 aa11.42□□□□□ -0.58
RFC1-214ENST00000512726 CCDC116Q8IYX3 515 aa11.42□□□□□ -0.58
RFC1-214ENST00000512726 SMTNP53814 917 aa11.41□□□□□ -0.58
RFC1-214ENST00000512726 PSMA6P60900 246 aaKnown RBP11.41□□□□□ -0.58
RFC1-214ENST00000512726 XPCQ01831 940 aaPredicted RBP11.41□□□□□ -0.58
RFC1-214ENST00000512726 PDE3BQ13370 1112 aa11.41□□□□□ -0.58
RFC1-214ENST00000512726 TBCELQ5QJ74 424 aa11.41□□□□□ -0.58
RFC1-214ENST00000512726 PLA2G2CQ5R387 149 aa11.41□□□□□ -0.58
RFC1-214ENST00000512726 COX20Q5RI15 118 aa11.41□□□□□ -0.58
RFC1-214ENST00000512726 MPNDQ8N594 471 aa11.41□□□□□ -0.58
RFC1-214ENST00000512726 ABTB2Q8N961 1025 aa11.41□□□□□ -0.58
RFC1-214ENST00000512726 SREK1Q8WXA9 508 aaKnown RBP11.41□□□□□ -0.58
RFC1-214ENST00000512726 DRC1Q96MC2 740 aa11.41□□□□□ -0.58
RFC1-214ENST00000512726 PRKD2Q9BZL6 878 aa11.41□□□□□ -0.58
RFC1-214ENST00000512726 LILRA1O75019 489 aa11.4□□□□□ -0.58
RFC1-214ENST00000512726 CD2BP2O95400 341 aaKnown RBP11.4□□□□□ -0.58
RFC1-214ENST00000512726 KCNC4Q03721 635 aa11.4□□□□□ -0.58
RFC1-214ENST00000512726 MRPL58Q14197 206 aaKnown RBP11.4□□□□□ -0.58
RFC1-214ENST00000512726 MTFR1Q15390 333 aa11.4□□□□□ -0.58
RFC1-214ENST00000512726 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
RFC1-214ENST00000512726 BACH2Q9BYV9 841 aa11.4□□□□□ -0.58
RFC1-214ENST00000512726 TNFRSF10BO14763 440 aa11.39□□□□□ -0.59
RFC1-214ENST00000512726 SCAMP3O14828 347 aaKnown RBP11.39□□□□□ -0.59
RFC1-214ENST00000512726 FZD6O60353 706 aa11.39□□□□□ -0.59
RFC1-214ENST00000512726 LDHBP07195 334 aaKnown RBP11.39□□□□□ -0.59
RFC1-214ENST00000512726 MAPK8P45983 427 aa11.39□□□□□ -0.59
RFC1-214ENST00000512726 DSC3Q14574 896 aa11.39□□□□□ -0.59
RFC1-214ENST00000512726 PPP1R26Q5T8A7 1209 aaPredicted RBP11.39□□□□□ -0.59
RFC1-214ENST00000512726 CCDC87Q9NVE4 849 aa11.39□□□□□ -0.59
RFC1-214ENST00000512726 PRPF40AO75400 957 aaKnown RBP11.38□□□□□ -0.59
RFC1-214ENST00000512726 ADH1CP00326 375 aa11.38□□□□□ -0.59
RFC1-214ENST00000512726 NR5A1Q13285 461 aa11.38□□□□□ -0.59
RFC1-214ENST00000512726 PGPEP1Q9NXJ5 209 aa11.38□□□□□ -0.59
RFC1-214ENST00000512726 ERCC5P28715 1186 aaPredicted RBP11.37□□□□□ -0.59
RFC1-214ENST00000512726 ATP2B2Q01814 1243 aa11.37□□□□□ -0.59
RFC1-214ENST00000512726 EHHADHQ08426 723 aa11.37□□□□□ -0.59
RFC1-214ENST00000512726 XAGE2Q96GT9 111 aa11.37□□□□□ -0.59
RFC1-214ENST00000512726 MYO19Q96H55 970 aa11.37□□□□□ -0.59
RFC1-214ENST00000512726 MRS2Q9HD23 443 aa11.37□□□□□ -0.59
RFC1-214ENST00000512726 TLL2Q9Y6L7 1015 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms