RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 CD2APQ9Y5K6 639 aa12.4□□□□□ -0.42
YIPF3-216ENST00000512713 KDRP35968 1356 aa12.4□□□□□ -0.42
YIPF3-216ENST00000512713 RGPD2P0DJD1 1756 aa12.39□□□□□ -0.43
YIPF3-216ENST00000512713 PTCD1O75127 700 aaKnown RBP12.39□□□□□ -0.43
YIPF3-216ENST00000512713 TRAPPC3LQ5T215 181 aa12.39□□□□□ -0.43
YIPF3-216ENST00000512713 AMIGO3Q86WK7 504 aa12.39□□□□□ -0.43
YIPF3-216ENST00000512713 NLGN2Q8NFZ4 835 aa12.39□□□□□ -0.43
YIPF3-216ENST00000512713 NPC1L1Q9UHC9 1359 aa12.39□□□□□ -0.43
YIPF3-216ENST00000512713 KAT6BQ8WYB5 2073 aa12.38□□□□□ -0.43
YIPF3-216ENST00000512713 ANKRD26Q9UPS8 1709 aa12.38□□□□□ -0.43
YIPF3-216ENST00000512713 GRIN3BO60391 1043 aa12.38□□□□□ -0.43
YIPF3-216ENST00000512713 RC3H1Q5TC82 1133 aaKnown RBP12.38□□□□□ -0.43
YIPF3-216ENST00000512713 SMIM5Q71RC9 77 aa12.38□□□□□ -0.43
YIPF3-216ENST00000512713 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
YIPF3-216ENST00000512713 U2SURPO15042 1029 aaKnown RBP12.37□□□□□ -0.43
YIPF3-216ENST00000512713 ADRA2BP18089 450 aa12.37□□□□□ -0.43
YIPF3-216ENST00000512713 NLGN1Q8N2Q7 840 aa12.37□□□□□ -0.43
YIPF3-216ENST00000512713 CFAP53Q96M91 514 aa12.37□□□□□ -0.43
YIPF3-216ENST00000512713 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
YIPF3-216ENST00000512713 RFC4P35249 363 aa12.36□□□□□ -0.43
YIPF3-216ENST00000512713 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
YIPF3-216ENST00000512713 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
YIPF3-216ENST00000512713 PKD1L3Q7Z443 1732 aa12.36□□□□□ -0.43
YIPF3-216ENST00000512713 CNTNAP4Q9C0A0 1308 aa12.36□□□□□ -0.43
YIPF3-216ENST00000512713 UTRNP46939 3433 aa12.35□□□□□ -0.43
YIPF3-216ENST00000512713 RPS6KA4O75676 772 aa12.35□□□□□ -0.43
YIPF3-216ENST00000512713 MTHFSDQ2M296 383 aaKnown RBP12.35□□□□□ -0.43
YIPF3-216ENST00000512713 ARHGEF1Q92888 912 aaKnown RBP12.35□□□□□ -0.43
YIPF3-216ENST00000512713 RNMTO43148 476 aaKnown RBP12.34□□□□□ -0.43
YIPF3-216ENST00000512713 MMP10P09238 476 aa12.34□□□□□ -0.43
YIPF3-216ENST00000512713 ZNF784Q8NCA9 323 aaPredicted RBP12.34□□□□□ -0.43
YIPF3-216ENST00000512713 LGR6Q9HBX8 967 aa12.34□□□□□ -0.43
YIPF3-216ENST00000512713 NUDCQ9Y266 331 aa12.34□□□□□ -0.43
YIPF3-216ENST00000512713 LY75O60449 1722 aa12.34□□□□□ -0.43
YIPF3-216ENST00000512713 CRKLP46109 303 aaKnown RBP12.33□□□□□ -0.44
YIPF3-216ENST00000512713 GAS2L2Q8NHY3 880 aa12.33□□□□□ -0.44
YIPF3-216ENST00000512713 MAP2P11137 1827 aaKnown RBP12.32□□□□□ -0.44
YIPF3-216ENST00000512713 GOLGB1Q14789 3259 aaKnown RBP12.32□□□□□ -0.44
YIPF3-216ENST00000512713 YBX3P16989 372 aaKnown RBP eCLIP12.32□□□□□ -0.442e-8■■■■□ 22.5
YIPF3-216ENST00000512713 C4BP0C0L5 1744 aa12.31□□□□□ -0.44
YIPF3-216ENST00000512713 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
YIPF3-216ENST00000512713 TEFQ10587 303 aa12.31□□□□□ -0.44
YIPF3-216ENST00000512713 TTC5Q8N0Z6 440 aa12.31□□□□□ -0.44
YIPF3-216ENST00000512713 PARP3Q9Y6F1 533 aa12.31□□□□□ -0.44
YIPF3-216ENST00000512713 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
YIPF3-216ENST00000512713 GYS1P13807 737 aa12.3□□□□□ -0.44
YIPF3-216ENST00000512713 SLC39A6Q13433 755 aa12.3□□□□□ -0.44
YIPF3-216ENST00000512713 CCDC87Q9NVE4 849 aa12.3□□□□□ -0.44
YIPF3-216ENST00000512713 C5P01031 1676 aa12.29□□□□□ -0.44
YIPF3-216ENST00000512713 ZPR1O75312 459 aa12.29□□□□□ -0.44
YIPF3-216ENST00000512713 U2AF1L5P0DN76 240 aaPredicted RBP12.29□□□□□ -0.44
YIPF3-216ENST00000512713 PPP2R1AP30153 589 aa12.29□□□□□ -0.44
YIPF3-216ENST00000512713 TGFB2P61812 414 aa12.29□□□□□ -0.44
YIPF3-216ENST00000512713 U2AF1Q01081 240 aaKnown RBP eCLIP12.29□□□□□ -0.44
YIPF3-216ENST00000512713 INTS5Q6P9B9 1019 aaKnown RBP12.29□□□□□ -0.44
YIPF3-216ENST00000512713 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
YIPF3-216ENST00000512713 VSIG10Q8N0Z9 540 aa12.29□□□□□ -0.44
YIPF3-216ENST00000512713 QSER1Q2KHR3 1735 aa12.28□□□□□ -0.44
YIPF3-216ENST00000512713 STARD3NLO95772 234 aa12.28□□□□□ -0.44
YIPF3-216ENST00000512713 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
YIPF3-216ENST00000512713 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
YIPF3-216ENST00000512713 FCHSD2O94868 740 aa12.27□□□□□ -0.45
YIPF3-216ENST00000512713 IL17REQ8NFR9 667 aa12.27□□□□□ -0.45
YIPF3-216ENST00000512713 RTF1Q92541 710 aaKnown RBP12.27□□□□□ -0.45
YIPF3-216ENST00000512713 WWC3Q9ULE0 1092 aa12.27□□□□□ -0.45
YIPF3-216ENST00000512713 USP42Q9H9J4 1324 aaKnown RBP12.27□□□□□ -0.45
YIPF3-216ENST00000512713 A0A0G2JLW4 131 aa12.26□□□□□ -0.45
YIPF3-216ENST00000512713 NEFMP07197 916 aa12.26□□□□□ -0.45
YIPF3-216ENST00000512713 PHACTR3Q96KR7 559 aa12.26□□□□□ -0.45
YIPF3-216ENST00000512713 TEX13AQ9BXU3 409 aaPredicted RBP12.26□□□□□ -0.45
YIPF3-216ENST00000512713 RSPH6AQ9H0K4 717 aa12.26□□□□□ -0.45
YIPF3-216ENST00000512713 SRP68Q9UHB9 627 aaKnown RBP12.26□□□□□ -0.45
YIPF3-216ENST00000512713 FKBP8Q14318 412 aa12.25□□□□□ -0.45
YIPF3-216ENST00000512713 ZNF790Q6PG37 636 aa12.25□□□□□ -0.45
YIPF3-216ENST00000512713 NPM2Q86SE8 214 aaKnown RBP12.25□□□□□ -0.45
YIPF3-216ENST00000512713 COL3A1P02461 1466 aaPredicted RBP12.25□□□□□ -0.45
YIPF3-216ENST00000512713 BTBD11A6QL63 1104 aa12.24□□□□□ -0.45
YIPF3-216ENST00000512713 ITGB4P16144 1822 aa12.24□□□□□ -0.45
YIPF3-216ENST00000512713 CANXP27824 592 aaKnown RBP12.24□□□□□ -0.45
YIPF3-216ENST00000512713 SOS1Q07889 1333 aaPredicted RBP12.24□□□□□ -0.45
YIPF3-216ENST00000512713 USPL1Q5W0Q7 1092 aa12.24□□□□□ -0.45
YIPF3-216ENST00000512713 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
YIPF3-216ENST00000512713 FMNL2Q96PY5 1086 aa12.24□□□□□ -0.45
YIPF3-216ENST00000512713 BCS1LQ9Y276 419 aa12.24□□□□□ -0.45
YIPF3-216ENST00000512713 A0A087WZG4 1122 aa12.23□□□□□ -0.45
YIPF3-216ENST00000512713 GIGYF1O75420 1035 aaPredicted RBP12.23□□□□□ -0.45
YIPF3-216ENST00000512713 DPEP1P16444 411 aa12.23□□□□□ -0.45
YIPF3-216ENST00000512713 NARFQ9UHQ1 456 aa12.23□□□□□ -0.45
YIPF3-216ENST00000512713 ZBTB1Q9Y2K1 713 aa12.23□□□□□ -0.45
YIPF3-216ENST00000512713 MRC1P22897 1456 aa12.22□□□□□ -0.45
YIPF3-216ENST00000512713 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
YIPF3-216ENST00000512713 TM4SF1P30408 202 aa12.22□□□□□ -0.45
YIPF3-216ENST00000512713 DDR1Q08345 913 aa12.22□□□□□ -0.45
YIPF3-216ENST00000512713 PNNQ9H307 717 aaKnown RBP12.22□□□□□ -0.45
YIPF3-216ENST00000512713 PIM2Q9P1W9 311 aa12.22□□□□□ -0.45
YIPF3-216ENST00000512713 COL24A1Q17RW2 1714 aa12.22□□□□□ -0.45
YIPF3-216ENST00000512713 CEMIPQ8WUJ3 1361 aa12.21□□□□□ -0.45
YIPF3-216ENST00000512713 TUBGCP6Q96RT7 1819 aa12.21□□□□□ -0.45
YIPF3-216ENST00000512713 POLRMTO00411 1230 aaKnown RBP12.21□□□□□ -0.45
YIPF3-216ENST00000512713 C1QTNF8P60827 252 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms