RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 MTHFSP49914 203 aa16.37■□□□□ 0.21
CDK7-208ENST00000512687 SULT6B1Q6IMI4 303 aa16.36■□□□□ 0.21
CDK7-208ENST00000512687 TMOD3Q9NYL9 352 aa16.36■□□□□ 0.21
CDK7-208ENST00000512687 ASAP1Q9ULH1 1129 aa16.36■□□□□ 0.21
CDK7-208ENST00000512687 CHD4Q14839 1912 aa16.36■□□□□ 0.21
CDK7-208ENST00000512687 CICQ96RK0 1608 aaPredicted RBP16.36■□□□□ 0.21
CDK7-208ENST00000512687 C4AP0C0L4 1744 aa16.36■□□□□ 0.21
CDK7-208ENST00000512687 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
CDK7-208ENST00000512687 ZNF530Q6P9A1 599 aaPredicted RBP16.35■□□□□ 0.21
CDK7-208ENST00000512687 AMIGO3Q86WK7 504 aa16.35■□□□□ 0.21
CDK7-208ENST00000512687 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
CDK7-208ENST00000512687 SMARCC1Q92922 1105 aaPredicted RBP16.35■□□□□ 0.21
CDK7-208ENST00000512687 FHDC1Q9C0D6 1143 aaPredicted RBP16.35■□□□□ 0.21
CDK7-208ENST00000512687 PLEKHO1Q53GL0 409 aaPredicted RBP16.34■□□□□ 0.21
CDK7-208ENST00000512687 SLC16A10Q8TF71 515 aa16.34■□□□□ 0.21
CDK7-208ENST00000512687 SIPA1L3O60292 1781 aaPredicted RBP16.33■□□□□ 0.21
CDK7-208ENST00000512687 ARXQ96QS3 562 aa16.33■□□□□ 0.2
CDK7-208ENST00000512687 ATG3Q9NT62 314 aa16.33■□□□□ 0.2
CDK7-208ENST00000512687 LOC102724428A0A0B4J2F2 783 aa16.32■□□□□ 0.2
CDK7-208ENST00000512687 MRC1P22897 1456 aa16.32■□□□□ 0.2
CDK7-208ENST00000512687 SIK1P57059 783 aa16.32■□□□□ 0.2
CDK7-208ENST00000512687 ITPK1Q13572 414 aa16.32■□□□□ 0.2
CDK7-208ENST00000512687 AMOTQ4VCS5 1084 aa16.32■□□□□ 0.2
CDK7-208ENST00000512687 SMIM5Q71RC9 77 aa16.32■□□□□ 0.2
CDK7-208ENST00000512687 LINC00116Q8NCU8 138 aa16.32■□□□□ 0.2
CDK7-208ENST00000512687 SYT17Q9BSW7 474 aa16.32■□□□□ 0.2
CDK7-208ENST00000512687 UBR2Q8IWV8 1755 aa16.31■□□□□ 0.2
CDK7-208ENST00000512687 MAP3K5Q99683 1374 aa16.31■□□□□ 0.2
CDK7-208ENST00000512687 HMOX1P09601 288 aa16.31■□□□□ 0.2
CDK7-208ENST00000512687 DCAF5Q96JK2 942 aa16.31■□□□□ 0.2
CDK7-208ENST00000512687 ERVV-2B6SEH9 535 aa16.3■□□□□ 0.2
CDK7-208ENST00000512687 HSP90AB1P08238 724 aaKnown RBP16.3■□□□□ 0.2
CDK7-208ENST00000512687 SLC4A9Q96Q91 983 aa16.3■□□□□ 0.2
CDK7-208ENST00000512687 UTRNP46939 3433 aa16.29■□□□□ 0.2
CDK7-208ENST00000512687 DIAPH1O60610 1272 aaKnown RBP16.29■□□□□ 0.2
CDK7-208ENST00000512687 MSL1Q68DK7 614 aa16.29■□□□□ 0.2
CDK7-208ENST00000512687 C1orf141Q5JVX7 400 aa16.28■□□□□ 0.2
CDK7-208ENST00000512687 AK7Q96M32 723 aa16.28■□□□□ 0.2
CDK7-208ENST00000512687 RNF39Q9H2S5 420 aa16.28■□□□□ 0.2
CDK7-208ENST00000512687 PHF14O94880 888 aa16.27■□□□□ 0.2
CDK7-208ENST00000512687 ATP6V1AP38606 617 aa16.27■□□□□ 0.2
CDK7-208ENST00000512687 KIF13BQ9NQT8 1826 aa16.26■□□□□ 0.19
CDK7-208ENST00000512687 DLG5Q8TDM6 1919 aa16.26■□□□□ 0.19
CDK7-208ENST00000512687 POLD1P28340 1107 aa16.26■□□□□ 0.19
CDK7-208ENST00000512687 CABP4P57796 275 aa16.26■□□□□ 0.19
CDK7-208ENST00000512687 KIAA1551Q9HCM1 1747 aa16.25■□□□□ 0.19
CDK7-208ENST00000512687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.25■□□□□ 0.19
CDK7-208ENST00000512687 AKAP4Q5JQC9 854 aa16.25■□□□□ 0.19
CDK7-208ENST00000512687 RBM42Q9BTD8 480 aaKnown RBP16.25■□□□□ 0.19
CDK7-208ENST00000512687 KCPQ6ZWJ8 1503 aa16.24■□□□□ 0.19
CDK7-208ENST00000512687 MTHFSDQ2M296 383 aaKnown RBP16.24■□□□□ 0.19
CDK7-208ENST00000512687 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
CDK7-208ENST00000512687 NFATC2IPQ8NCF5 419 aa16.24■□□□□ 0.19
CDK7-208ENST00000512687 FLAD1Q8NFF5 587 aa16.24■□□□□ 0.19
CDK7-208ENST00000512687 NLGN2Q8NFZ4 835 aa16.24■□□□□ 0.19
CDK7-208ENST00000512687 LGR6Q9HBX8 967 aa16.24■□□□□ 0.19
CDK7-208ENST00000512687 GOLGB1Q14789 3259 aaKnown RBP16.23■□□□□ 0.19
CDK7-208ENST00000512687 GNPATO15228 680 aa16.23■□□□□ 0.19
CDK7-208ENST00000512687 SSFA2P28290 1259 aa16.23■□□□□ 0.19
CDK7-208ENST00000512687 N4BP2Q86UW6 1770 aaPredicted RBP16.23■□□□□ 0.19
CDK7-208ENST00000512687 U2SURPO15042 1029 aaKnown RBP16.22■□□□□ 0.19
CDK7-208ENST00000512687 RNMTO43148 476 aaKnown RBP16.22■□□□□ 0.19
CDK7-208ENST00000512687 HMGB2P26583 209 aaKnown RBP16.22■□□□□ 0.19
CDK7-208ENST00000512687 PTCD1O75127 700 aaKnown RBP16.21■□□□□ 0.19
CDK7-208ENST00000512687 YY1P25490 414 aa16.21■□□□□ 0.19
CDK7-208ENST00000512687 PPP2R1AP30153 589 aa16.21■□□□□ 0.19
CDK7-208ENST00000512687 SLC52A2Q9HAB3 445 aa16.21■□□□□ 0.19
CDK7-208ENST00000512687 CNTNAP4Q9C0A0 1308 aa16.2■□□□□ 0.18
CDK7-208ENST00000512687 BRCA1P38398 1863 aaKnown RBP16.2■□□□□ 0.18
CDK7-208ENST00000512687 SLC39A6Q13433 755 aa16.18■□□□□ 0.18
CDK7-208ENST00000512687 AFDNP55196 1824 aaKnown RBP16.17■□□□□ 0.18
CDK7-208ENST00000512687 C1QBPQ07021 282 aaKnown RBP16.17■□□□□ 0.18
CDK7-208ENST00000512687 RC3H1Q5TC82 1133 aaKnown RBP16.17■□□□□ 0.18
CDK7-208ENST00000512687 RSPH6AQ9H0K4 717 aa16.17■□□□□ 0.18
CDK7-208ENST00000512687 CRKLP46109 303 aaKnown RBP16.16■□□□□ 0.18
CDK7-208ENST00000512687 CFAP53Q96M91 514 aa16.16■□□□□ 0.18
CDK7-208ENST00000512687 RTCBQ9Y3I0 505 aaKnown RBP16.16■□□□□ 0.18
CDK7-208ENST00000512687 RPS6KA4O75676 772 aa16.15■□□□□ 0.18
CDK7-208ENST00000512687 PRKAR2BP31323 418 aa16.15■□□□□ 0.18
CDK7-208ENST00000512687 ARHGEF1Q92888 912 aaKnown RBP16.15■□□□□ 0.18
CDK7-208ENST00000512687 PHACTR3Q96KR7 559 aa16.15■□□□□ 0.18
CDK7-208ENST00000512687 YBX3P16989 372 aaKnown RBP eCLIP16.14■□□□□ 0.17
CDK7-208ENST00000512687 GPR162Q16538 588 aa16.14■□□□□ 0.17
CDK7-208ENST00000512687 DNAJC10Q8IXB1 793 aa16.14■□□□□ 0.17
CDK7-208ENST00000512687 PELP1Q8IZL8 1130 aaKnown RBP16.14■□□□□ 0.17
CDK7-208ENST00000512687 IL17REQ8NFR9 667 aa16.14■□□□□ 0.17
CDK7-208ENST00000512687 TRAPPC3LQ5T215 181 aa16.13■□□□□ 0.17
CDK7-208ENST00000512687 INTS5Q6P9B9 1019 aaKnown RBP16.13■□□□□ 0.17
CDK7-208ENST00000512687 GAS2L2Q8NHY3 880 aa16.13■□□□□ 0.17
CDK7-208ENST00000512687 CD2APQ9Y5K6 639 aa16.13■□□□□ 0.17
CDK7-208ENST00000512687 SCN7AQ01118 1682 aa16.13■□□□□ 0.17
CDK7-208ENST00000512687 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
CDK7-208ENST00000512687 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
CDK7-208ENST00000512687 GYS1P13807 737 aa16.12■□□□□ 0.17
CDK7-208ENST00000512687 KDM3BQ7LBC6 1761 aa16.12■□□□□ 0.17
CDK7-208ENST00000512687 NRXN2Q9P2S2 1712 aa16.11■□□□□ 0.17
CDK7-208ENST00000512687 BCORQ6W2J9 1755 aa16.11■□□□□ 0.17
CDK7-208ENST00000512687 ARFGEF1Q9Y6D6 1849 aa16.11■□□□□ 0.17
CDK7-208ENST00000512687 MMP10P09238 476 aa16.11■□□□□ 0.17
CDK7-208ENST00000512687 U2AF1L5P0DN76 240 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms