RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 ATP6V1AP38606 617 aa19.94■□□□□ 0.78
LETM1-207ENST00000512669 TNNT2P45379 298 aaPredicted RBP19.94■□□□□ 0.78
LETM1-207ENST00000512669 AMIGO3Q86WK7 504 aa19.94■□□□□ 0.78
LETM1-207ENST00000512669 ZNF831Q5JPB2 1677 aa19.94■□□□□ 0.78
LETM1-207ENST00000512669 CICQ96RK0 1608 aaPredicted RBP19.93■□□□□ 0.78
LETM1-207ENST00000512669 ASAP1Q9ULH1 1129 aa19.92■□□□□ 0.78
LETM1-207ENST00000512669 KIF13BQ9NQT8 1826 aa19.91■□□□□ 0.78
LETM1-207ENST00000512669 HSP90AB1P08238 724 aaKnown RBP19.91■□□□□ 0.78
LETM1-207ENST00000512669 HSPA6P17066 643 aa19.9■□□□□ 0.78
LETM1-207ENST00000512669 ADRA2BP18089 450 aa19.9■□□□□ 0.78
LETM1-207ENST00000512669 ITPK1Q13572 414 aa19.9■□□□□ 0.78
LETM1-207ENST00000512669 IFFO2Q5TF58 517 aa19.9■□□□□ 0.78
LETM1-207ENST00000512669 KDRP35968 1356 aa19.9■□□□□ 0.78
LETM1-207ENST00000512669 CEP350Q5VT06 3117 aa19.9■□□□□ 0.78
LETM1-207ENST00000512669 ERVV-2B6SEH9 535 aa19.89■□□□□ 0.77
LETM1-207ENST00000512669 TGFB2P61812 414 aa19.89■□□□□ 0.77
LETM1-207ENST00000512669 NLGN1Q8N2Q7 840 aa19.89■□□□□ 0.77
LETM1-207ENST00000512669 ATG3Q9NT62 314 aa19.89■□□□□ 0.77
LETM1-207ENST00000512669 RTCBQ9Y3I0 505 aaKnown RBP19.89■□□□□ 0.77
LETM1-207ENST00000512669 MMP10P09238 476 aa19.88■□□□□ 0.77
LETM1-207ENST00000512669 EIF4A2Q14240 407 aaKnown RBP19.88■□□□□ 0.77
LETM1-207ENST00000512669 AMER1Q5JTC6 1135 aaPredicted RBP19.88■□□□□ 0.77
LETM1-207ENST00000512669 TRAPPC3LQ5T215 181 aa19.88■□□□□ 0.77
LETM1-207ENST00000512669 ZNF526Q8TF50 670 aaPredicted RBP19.88■□□□□ 0.77
LETM1-207ENST00000512669 PER1O15534 1290 aaPredicted RBP19.87■□□□□ 0.77
LETM1-207ENST00000512669 RC3H1Q5TC82 1133 aaKnown RBP19.87■□□□□ 0.77
LETM1-207ENST00000512669 DCAF5Q96JK2 942 aa19.87■□□□□ 0.77
LETM1-207ENST00000512669 PXDNLA1KZ92 1463 aa19.86■□□□□ 0.77
LETM1-207ENST00000512669 SMIM5Q71RC9 77 aa19.86■□□□□ 0.77
LETM1-207ENST00000512669 CNTNAP4Q9C0A0 1308 aa19.85■□□□□ 0.77
LETM1-207ENST00000512669 MORC1Q86VD1 984 aa19.85■□□□□ 0.77
LETM1-207ENST00000512669 KNSTRNQ9Y448 316 aa19.85■□□□□ 0.77
LETM1-207ENST00000512669 COL5A3P25940 1745 aaPredicted RBP19.85■□□□□ 0.77
LETM1-207ENST00000512669 C10orf71Q711Q0 1435 aa19.85■□□□□ 0.77
LETM1-207ENST00000512669 AMOTQ4VCS5 1084 aa19.84■□□□□ 0.77
LETM1-207ENST00000512669 PLEKHO1Q53GL0 409 aaPredicted RBP19.84■□□□□ 0.77
LETM1-207ENST00000512669 CCDC87Q9NVE4 849 aa19.84■□□□□ 0.77
LETM1-207ENST00000512669 WWC3Q9ULE0 1092 aa19.84■□□□□ 0.77
LETM1-207ENST00000512669 KIAA1551Q9HCM1 1747 aa19.83■□□□□ 0.77
LETM1-207ENST00000512669 RBM42Q9BTD8 480 aaKnown RBP19.83■□□□□ 0.77
LETM1-207ENST00000512669 C4AP0C0L4 1744 aa19.82■□□□□ 0.76
LETM1-207ENST00000512669 KIF3CO14782 793 aa19.82■□□□□ 0.76
LETM1-207ENST00000512669 RPS6KA4O75676 772 aa19.81■□□□□ 0.76
LETM1-207ENST00000512669 RFC4P35249 363 aa19.81■□□□□ 0.76
LETM1-207ENST00000512669 N4BP2Q86UW6 1770 aaPredicted RBP19.8■□□□□ 0.76
LETM1-207ENST00000512669 CABP4P57796 275 aa19.8■□□□□ 0.76
LETM1-207ENST00000512669 ARHGEF1Q92888 912 aaKnown RBP19.8■□□□□ 0.76
LETM1-207ENST00000512669 BCS1LQ9Y276 419 aa19.8■□□□□ 0.76
LETM1-207ENST00000512669 PARP3Q9Y6F1 533 aa19.8■□□□□ 0.76
LETM1-207ENST00000512669 GYS1P13807 737 aa19.79■□□□□ 0.76
LETM1-207ENST00000512669 ZNF530Q6P9A1 599 aaPredicted RBP19.79■□□□□ 0.76
LETM1-207ENST00000512669 SLC4A9Q96Q91 983 aa19.79■□□□□ 0.76
LETM1-207ENST00000512669 KDM6AO15550 1401 aaPredicted RBP19.78■□□□□ 0.76
LETM1-207ENST00000512669 BRCA1P38398 1863 aaKnown RBP19.78■□□□□ 0.76
LETM1-207ENST00000512669 APLP1P51693 650 aa19.78■□□□□ 0.76
LETM1-207ENST00000512669 C1orf141Q5JVX7 400 aa19.78■□□□□ 0.76
LETM1-207ENST00000512669 TOMM70O94826 608 aa19.77■□□□□ 0.76
LETM1-207ENST00000512669 A0A0G2JLW4 131 aa19.76■□□□□ 0.75
LETM1-207ENST00000512669 IL13P35225 146 aa19.76■□□□□ 0.75
LETM1-207ENST00000512669 MTHFSP49914 203 aa19.76■□□□□ 0.75
LETM1-207ENST00000512669 ARFGEF1Q9Y6D6 1849 aa19.76■□□□□ 0.75
LETM1-207ENST00000512669 MYH14Q7Z406 1995 aaKnown RBP19.75■□□□□ 0.75
LETM1-207ENST00000512669 FCHSD2O94868 740 aa19.75■□□□□ 0.75
LETM1-207ENST00000512669 CC2D1BQ5T0F9 858 aaKnown RBP19.75■□□□□ 0.75
LETM1-207ENST00000512669 ARHGAP27Q6ZUM4 889 aa19.75■□□□□ 0.75
LETM1-207ENST00000512669 AEBP1Q8IUX7 1158 aa19.75■□□□□ 0.75
LETM1-207ENST00000512669 DPEP1P16444 411 aa19.74■□□□□ 0.75
LETM1-207ENST00000512669 PIM2Q9P1W9 311 aa19.73■□□□□ 0.75
LETM1-207ENST00000512669 CRKLP46109 303 aaKnown RBP19.72■□□□□ 0.75
LETM1-207ENST00000512669 USP42Q9H9J4 1324 aaKnown RBP19.72■□□□□ 0.75
LETM1-207ENST00000512669 PTCD1O75127 700 aaKnown RBP19.71■□□□□ 0.75
LETM1-207ENST00000512669 TJP1Q07157 1748 aa19.71■□□□□ 0.75
LETM1-207ENST00000512669 SCN11AQ9UI33 1791 aa19.7■□□□□ 0.74
LETM1-207ENST00000512669 DALRD3Q5D0E6 543 aaKnown RBP19.7■□□□□ 0.74
LETM1-207ENST00000512669 SULT6B1Q6IMI4 303 aa19.7■□□□□ 0.74
LETM1-207ENST00000512669 NFATC2IPQ8NCF5 419 aa19.7■□□□□ 0.74
LETM1-207ENST00000512669 NPC1L1Q9UHC9 1359 aa19.7■□□□□ 0.74
LETM1-207ENST00000512669 CNGB1Q14028 1251 aaPredicted RBP19.69■□□□□ 0.74
LETM1-207ENST00000512669 RBM46Q8TBY0 533 aaKnown RBP19.69■□□□□ 0.74
LETM1-207ENST00000512669 KCNA3P22001 575 aa19.68■□□□□ 0.74
LETM1-207ENST00000512669 C9orf131Q5VYM1 1079 aa19.68■□□□□ 0.74
LETM1-207ENST00000512669 C16orf71Q8IYS4 520 aaPredicted RBP19.68■□□□□ 0.74
LETM1-207ENST00000512669 KDM2BQ8NHM5 1336 aa19.68■□□□□ 0.74
LETM1-207ENST00000512669 FKBP8Q14318 412 aa19.67■□□□□ 0.74
LETM1-207ENST00000512669 AKAP4Q5JQC9 854 aa19.67■□□□□ 0.74
LETM1-207ENST00000512669 ZPR1O75312 459 aa19.66■□□□□ 0.74
LETM1-207ENST00000512669 NMRK2Q9NPI5 230 aa19.66■□□□□ 0.74
LETM1-207ENST00000512669 SRP68Q9UHB9 627 aaKnown RBP19.66■□□□□ 0.74
LETM1-207ENST00000512669 DDR1Q08345 913 aa19.65■□□□□ 0.74
LETM1-207ENST00000512669 FSTL1Q12841 308 aa19.65■□□□□ 0.74
LETM1-207ENST00000512669 MRC1P22897 1456 aa19.65■□□□□ 0.74
LETM1-207ENST00000512669 ADAMTS7Q9UKP4 1686 aa19.65■□□□□ 0.74
LETM1-207ENST00000512669 POLRMTO00411 1230 aaKnown RBP19.64■□□□□ 0.73
LETM1-207ENST00000512669 INTS5Q6P9B9 1019 aaKnown RBP19.64■□□□□ 0.73
LETM1-207ENST00000512669 SLC52A2Q9HAB3 445 aa19.64■□□□□ 0.73
LETM1-207ENST00000512669 ZC3H4Q9UPT8 1303 aaKnown RBP19.64■□□□□ 0.73
LETM1-207ENST00000512669 TNRC6CQ9HCJ0 1690 aaKnown RBP19.64■□□□□ 0.73
LETM1-207ENST00000512669 WDR90Q96KV7 1748 aa19.64■□□□□ 0.73
LETM1-207ENST00000512669 TM4SF1P30408 202 aa19.63■□□□□ 0.73
LETM1-207ENST00000512669 RNF181Q9P0P0 153 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms