RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.36□□□□□ -0.75
USP46-208ENST00000512656 PLCH1Q4KWH8 1693 aa10.35□□□□□ -0.75
USP46-208ENST00000512656 NBPF26B4DH59 902 aa10.35□□□□□ -0.75
USP46-208ENST00000512656 KCNV2Q8TDN2 545 aa10.35□□□□□ -0.75
USP46-208ENST00000512656 LRCH3Q96II8 777 aa10.35□□□□□ -0.75
USP46-208ENST00000512656 ABCA3Q99758 1704 aa10.35□□□□□ -0.75
USP46-208ENST00000512656 TRPM3Q9HCF6 1732 aaPredicted RBP10.35□□□□□ -0.75
USP46-208ENST00000512656 ATP7BP35670 1465 aa10.35□□□□□ -0.75
USP46-208ENST00000512656 ITGBL1O95965 494 aaPredicted RBP10.34□□□□□ -0.75
USP46-208ENST00000512656 TSR3Q9UJK0 312 aaKnown RBP10.34□□□□□ -0.75
USP46-208ENST00000512656 ALS2Q96Q42 1657 aa10.34□□□□□ -0.75
USP46-208ENST00000512656 COL14A1Q05707 1796 aaKnown RBP10.34□□□□□ -0.75
USP46-208ENST00000512656 ACEP12821 1306 aa10.33□□□□□ -0.76
USP46-208ENST00000512656 SPATA31A5Q5VU36 1347 aa10.33□□□□□ -0.76
USP46-208ENST00000512656 SPATA31A7Q8IWB4 1347 aa10.33□□□□□ -0.76
USP46-208ENST00000512656 ITSN1Q15811 1721 aa10.33□□□□□ -0.76
USP46-208ENST00000512656 ARHGEF28Q8N1W1 1705 aaKnown RBP10.33□□□□□ -0.76
USP46-208ENST00000512656 PLEKHG3A1L390 1219 aa10.33□□□□□ -0.76
USP46-208ENST00000512656 NBPF8Q3BBV2 869 aa10.33□□□□□ -0.76
USP46-208ENST00000512656 POLR3AO14802 1390 aaPredicted RBP10.33□□□□□ -0.76
USP46-208ENST00000512656 KIAA1210Q9ULL0 1709 aa10.33□□□□□ -0.76
USP46-208ENST00000512656 CENPJQ9HC77 1338 aaPredicted RBP10.33□□□□□ -0.76
USP46-208ENST00000512656 BAG6P46379 1132 aa10.32□□□□□ -0.76
USP46-208ENST00000512656 SRPK2P78362 688 aaKnown RBP10.32□□□□□ -0.76
USP46-208ENST00000512656 DEFB132Q7Z7B7 95 aa10.32□□□□□ -0.76
USP46-208ENST00000512656 TTC13Q8NBP0 860 aa10.32□□□□□ -0.76
USP46-208ENST00000512656 TATDN2Q93075 761 aa10.32□□□□□ -0.76
USP46-208ENST00000512656 FAM198AQ9UFP1 575 aa10.32□□□□□ -0.76
USP46-208ENST00000512656 KIAA0232Q92628 1395 aa10.31□□□□□ -0.76
USP46-208ENST00000512656 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
USP46-208ENST00000512656 NBPF1Q3BBV0 1214 aa10.31□□□□□ -0.76
USP46-208ENST00000512656 ABTB2Q8N961 1025 aa10.31□□□□□ -0.76
USP46-208ENST00000512656 CDHR5Q9HBB8 845 aa10.31□□□□□ -0.76
USP46-208ENST00000512656 WBP1LQ9NX94 342 aa10.31□□□□□ -0.76
USP46-208ENST00000512656 BRWD3Q6RI45 1802 aa10.3□□□□□ -0.76
USP46-208ENST00000512656 BRD4O60885 1362 aaPredicted RBP10.3□□□□□ -0.76
USP46-208ENST00000512656 EVA1CP58658 441 aa10.3□□□□□ -0.76
USP46-208ENST00000512656 ZC3H6P61129 1189 aaKnown RBP10.3□□□□□ -0.76
USP46-208ENST00000512656 NUTM2GQ5VZR2 741 aa10.3□□□□□ -0.76
USP46-208ENST00000512656 NLRP13Q86W25 1043 aa10.3□□□□□ -0.76
USP46-208ENST00000512656 NPDC1Q9NQX5 325 aaPredicted RBP10.3□□□□□ -0.76
USP46-208ENST00000512656 SPATA31A1Q5TZJ5 1347 aa10.3□□□□□ -0.76
USP46-208ENST00000512656 NRAPQ86VF7 1730 aa10.3□□□□□ -0.76
USP46-208ENST00000512656 CHRNA2Q15822 529 aa10.29□□□□□ -0.76
USP46-208ENST00000512656 STRN4Q9NRL3 753 aa10.29□□□□□ -0.76
USP46-208ENST00000512656 PNMA3Q9UL41 463 aa10.29□□□□□ -0.76
USP46-208ENST00000512656 HPS5Q9UPZ3 1129 aa10.29□□□□□ -0.76
USP46-208ENST00000512656 PPIP5K1Q6PFW1 1433 aa10.28□□□□□ -0.76
USP46-208ENST00000512656 L3MBTL2Q969R5 705 aa10.28□□□□□ -0.76
USP46-208ENST00000512656 CPDO75976 1380 aa10.27□□□□□ -0.76
USP46-208ENST00000512656 CRYBG1Q9Y4K1 1723 aa10.27□□□□□ -0.76
USP46-208ENST00000512656 PDE3BQ13370 1112 aa10.27□□□□□ -0.77
USP46-208ENST00000512656 FAM196AQ6ZSG2 479 aa10.27□□□□□ -0.77
USP46-208ENST00000512656 TOPAZ1Q8N9V7 1692 aa10.27□□□□□ -0.77
USP46-208ENST00000512656 USP19O94966 1318 aa10.27□□□□□ -0.77
USP46-208ENST00000512656 EVC2Q86UK5 1308 aa10.27□□□□□ -0.77
USP46-208ENST00000512656 GCP02774 474 aa10.26□□□□□ -0.77
USP46-208ENST00000512656 MLLT3P42568 568 aaPredicted RBP10.26□□□□□ -0.77
USP46-208ENST00000512656 PPP4CP60510 307 aa10.26□□□□□ -0.77
USP46-208ENST00000512656 BARGINQ6ZT62 677 aa10.26□□□□□ -0.77
USP46-208ENST00000512656 CABP1Q9NZU7 370 aa10.26□□□□□ -0.77
USP46-208ENST00000512656 PHRF1Q9P1Y6 1649 aaKnown RBP10.25□□□□□ -0.77
USP46-208ENST00000512656 SMAPO00193 183 aa10.25□□□□□ -0.77
USP46-208ENST00000512656 FAM182BQ5T319 152 aa10.25□□□□□ -0.77
USP46-208ENST00000512656 NUDT18Q6ZVK8 323 aa10.25□□□□□ -0.77
USP46-208ENST00000512656 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
USP46-208ENST00000512656 TCP11L2Q8N4U5 519 aa10.25□□□□□ -0.77
USP46-208ENST00000512656 NECTIN2Q92692 538 aa10.25□□□□□ -0.77
USP46-208ENST00000512656 USP35Q9P2H5 1018 aa10.25□□□□□ -0.77
USP46-208ENST00000512656 THRAP3Q9Y2W1 955 aaKnown RBP10.25□□□□□ -0.77
USP46-208ENST00000512656 THSD7AQ9UPZ6 1657 aa10.25□□□□□ -0.77
USP46-208ENST00000512656 SSH2Q76I76 1423 aa10.24□□□□□ -0.77
USP46-208ENST00000512656 C11orf95C9JLR9 678 aaPredicted RBP10.24□□□□□ -0.77
USP46-208ENST00000512656 KCNC4Q03721 635 aa10.24□□□□□ -0.77
USP46-208ENST00000512656 NEUROD1Q13562 356 aa10.24□□□□□ -0.77
USP46-208ENST00000512656 PADI6Q6TGC4 694 aa10.24□□□□□ -0.77
USP46-208ENST00000512656 ROCK2O75116 1388 aaKnown RBP10.24□□□□□ -0.77
USP46-208ENST00000512656 DISP2A7MBM2 1401 aa10.24□□□□□ -0.77
USP46-208ENST00000512656 USP6P35125 1406 aa10.24□□□□□ -0.77
USP46-208ENST00000512656 C3orf80F5H4A9 247 aa10.23□□□□□ -0.77
USP46-208ENST00000512656 LARP1Q6PKG0 1096 aaKnown RBP10.23□□□□□ -0.77
USP46-208ENST00000512656 SIN3AQ96ST3 1273 aa10.23□□□□□ -0.77
USP46-208ENST00000512656 RGPD1P0DJD0 1748 aa10.23□□□□□ -0.77
USP46-208ENST00000512656 NRKQ7Z2Y5 1582 aa10.22□□□□□ -0.77
USP46-208ENST00000512656 QRICH2Q9H0J4 1663 aa10.22□□□□□ -0.77
USP46-208ENST00000512656 ZBTB7CA1YPR0 619 aa10.22□□□□□ -0.77
USP46-208ENST00000512656 TRIM37O94972 964 aa10.22□□□□□ -0.77
USP46-208ENST00000512656 APBA3O96018 575 aa10.22□□□□□ -0.77
USP46-208ENST00000512656 AATKQ6ZMQ8 1374 aa10.22□□□□□ -0.77
USP46-208ENST00000512656 PARD3Q8TEW0 1356 aa10.22□□□□□ -0.77
USP46-208ENST00000512656 CAMTA1Q9Y6Y1 1673 aa10.22□□□□□ -0.77
USP46-208ENST00000512656 PTGDRQ13258 359 aa10.21□□□□□ -0.77
USP46-208ENST00000512656 COL5A2P05997 1499 aaPredicted RBP10.2□□□□□ -0.78
USP46-208ENST00000512656 CRB1P82279 1406 aa10.2□□□□□ -0.78
USP46-208ENST00000512656 EZH2Q15910 746 aaKnown RBP10.2□□□□□ -0.78
USP46-208ENST00000512656 KCNH5Q8NCM2 988 aa10.2□□□□□ -0.78
USP46-208ENST00000512656 TTC21AQ8NDW8 1320 aa10.2□□□□□ -0.78
USP46-208ENST00000512656 CAMKK2Q96RR4 588 aa10.2□□□□□ -0.78
USP46-208ENST00000512656 LMO7Q8WWI1 1683 aa10.19□□□□□ -0.78
USP46-208ENST00000512656 TRPM1Q7Z4N2 1603 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms