RNA–Protein interactions for RNA: ENST00000512380.1

PDLIM3-208, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-208ENST00000512380 C8orf37Q96NL8 207 aa10.17□□□□□ -0.78
PDLIM3-208ENST00000512380 MKRN1Q9UHC7 482 aaKnown RBP10.17□□□□□ -0.78
PDLIM3-208ENST00000512380 FBXO45P0C2W1 286 aa10.16□□□□□ -0.78
PDLIM3-208ENST00000512380 NBPF20Q3BBV1 942 aa10.16□□□□□ -0.78
PDLIM3-208ENST00000512380 PPP1R26Q5T8A7 1209 aaPredicted RBP10.16□□□□□ -0.78
PDLIM3-208ENST00000512380 NACADO15069 1562 aa10.15□□□□□ -0.78
PDLIM3-208ENST00000512380 UPP2O95045 317 aa10.15□□□□□ -0.78
PDLIM3-208ENST00000512380 RASA1P20936 1047 aa10.15□□□□□ -0.78
PDLIM3-208ENST00000512380 SCNN1AP37088 669 aa10.15□□□□□ -0.78
PDLIM3-208ENST00000512380 DHX9Q08211 1270 aaKnown RBP10.15□□□□□ -0.78
PDLIM3-208ENST00000512380 FAM69CQ0P6D2 419 aa10.15□□□□□ -0.78
PDLIM3-208ENST00000512380 INTS6LQ5JSJ4 861 aaKnown RBP10.15□□□□□ -0.78
PDLIM3-208ENST00000512380 PGPEP1Q9NXJ5 209 aa10.15□□□□□ -0.78
PDLIM3-208ENST00000512380 PTK7Q13308 1070 aa10.14□□□□□ -0.79
PDLIM3-208ENST00000512380 C6orf118Q5T5N4 469 aa10.14□□□□□ -0.79
PDLIM3-208ENST00000512380 TSEN34Q9BSV6 310 aaKnown RBP10.14□□□□□ -0.79
PDLIM3-208ENST00000512380 CDCA7Q9BWT1 371 aaPredicted RBP10.14□□□□□ -0.79
PDLIM3-208ENST00000512380 ZCCHC6Q5VYS8 1495 aaKnown RBP10.14□□□□□ -0.79
PDLIM3-208ENST00000512380 RB1CC1Q8TDY2 1594 aa10.14□□□□□ -0.79
PDLIM3-208ENST00000512380 ZBBXA8MT70 800 aa10.13□□□□□ -0.79
PDLIM3-208ENST00000512380 BMP2P12643 396 aa10.13□□□□□ -0.79
PDLIM3-208ENST00000512380 Q6ZVU0 165 aa10.13□□□□□ -0.79
PDLIM3-208ENST00000512380 H3BM21 787 aa10.12□□□□□ -0.79
PDLIM3-208ENST00000512380 SLC16A10Q8TF71 515 aa10.12□□□□□ -0.79
PDLIM3-208ENST00000512380 PPP1R1BQ9UD71 204 aaPredicted RBP10.12□□□□□ -0.79
PDLIM3-208ENST00000512380 VAMP1P23763 118 aa10.11□□□□□ -0.79
PDLIM3-208ENST00000512380 ZC3H6P61129 1189 aaKnown RBP10.11□□□□□ -0.79
PDLIM3-208ENST00000512380 ANKMY2Q8IV38 441 aa10.11□□□□□ -0.79
PDLIM3-208ENST00000512380 SOS2Q07890 1332 aaPredicted RBP10.1□□□□□ -0.79
PDLIM3-208ENST00000512380 SOBPA7XYQ1 873 aa10.1□□□□□ -0.79
PDLIM3-208ENST00000512380 ATP5J2-PTCD1G3V325 749 aa10.1□□□□□ -0.79
PDLIM3-208ENST00000512380 PPM1GO15355 546 aaPredicted RBP10.1□□□□□ -0.79
PDLIM3-208ENST00000512380 SMARCA5O60264 1052 aaPredicted RBP10.1□□□□□ -0.79
PDLIM3-208ENST00000512380 NCOA4Q13772 614 aa10.1□□□□□ -0.79
PDLIM3-208ENST00000512380 DZIP3Q86Y13 1208 aaKnown RBP10.1□□□□□ -0.79
PDLIM3-208ENST00000512380 ESPNB1AK53 854 aa10.09□□□□□ -0.79
PDLIM3-208ENST00000512380 MAN1A2O60476 641 aa10.09□□□□□ -0.79
PDLIM3-208ENST00000512380 ABL1P00519 1130 aa10.09□□□□□ -0.79
PDLIM3-208ENST00000512380 TAGLNQ01995 201 aaKnown RBP10.09□□□□□ -0.79
PDLIM3-208ENST00000512380 CBLBQ13191 982 aa10.09□□□□□ -0.79
PDLIM3-208ENST00000512380 DPYDQ12882 1025 aa10.08□□□□□ -0.8
PDLIM3-208ENST00000512380 IRF7Q92985 503 aa10.08□□□□□ -0.8
PDLIM3-208ENST00000512380 DNMT3LQ9UJW3 386 aa10.08□□□□□ -0.8
PDLIM3-208ENST00000512380 SPINT1O43278 529 aa10.07□□□□□ -0.8
PDLIM3-208ENST00000512380 CANXP27824 592 aaKnown RBP10.07□□□□□ -0.8
PDLIM3-208ENST00000512380 VEGFBP49765 207 aa10.07□□□□□ -0.8
PDLIM3-208ENST00000512380 NAALADL2Q58DX5 795 aa10.07□□□□□ -0.8
PDLIM3-208ENST00000512380 MYO15BQ96JP2 1530 aa10.07□□□□□ -0.8
PDLIM3-208ENST00000512380 RECKO95980 971 aa10.06□□□□□ -0.8
PDLIM3-208ENST00000512380 INSM1Q01101 510 aaPredicted RBP10.06□□□□□ -0.8
PDLIM3-208ENST00000512380 ZNF211Q13398 564 aaPredicted RBP10.06□□□□□ -0.8
PDLIM3-208ENST00000512380 SWI5Q1ZZU3 235 aa10.06□□□□□ -0.8
PDLIM3-208ENST00000512380 SLFNL1Q499Z3 407 aa10.06□□□□□ -0.8
PDLIM3-208ENST00000512380 SEPT12Q8IYM1 358 aa10.06□□□□□ -0.8
PDLIM3-208ENST00000512380 UBXN4Q92575 508 aa10.06□□□□□ -0.8
PDLIM3-208ENST00000512380 SPATA32Q96LK8 384 aa10.06□□□□□ -0.8
PDLIM3-208ENST00000512380 DCAF1Q9Y4B6 1507 aa10.06□□□□□ -0.8
PDLIM3-208ENST00000512380 H3BRB1 525 aa10.05□□□□□ -0.8
PDLIM3-208ENST00000512380 VSIG8P0DPA2 414 aa10.05□□□□□ -0.8
PDLIM3-208ENST00000512380 MAPK1P28482 360 aa10.05□□□□□ -0.8
PDLIM3-208ENST00000512380 FBXO33Q7Z6M2 555 aa10.05□□□□□ -0.8
PDLIM3-208ENST00000512380 ZNF784Q8NCA9 323 aaPredicted RBP10.05□□□□□ -0.8
PDLIM3-208ENST00000512380 ZNF594Q96JF6 807 aaPredicted RBP10.05□□□□□ -0.8
PDLIM3-208ENST00000512380 TUT1Q9H6E5 874 aaKnown RBP10.05□□□□□ -0.8
PDLIM3-208ENST00000512380 ANO2Q9NQ90 1003 aa10.05□□□□□ -0.8
PDLIM3-208ENST00000512380 TTLL8A6PVC2 850 aa10.04□□□□□ -0.8
PDLIM3-208ENST00000512380 ERVH48-1M5A8F1 160 aa10.04□□□□□ -0.8
PDLIM3-208ENST00000512380 TSNAXIP1Q2TAA8 658 aa10.04□□□□□ -0.8
PDLIM3-208ENST00000512380 RNF135Q8IUD6 432 aa10.04□□□□□ -0.8
PDLIM3-208ENST00000512380 OGFOD1Q8N543 542 aa10.04□□□□□ -0.8
PDLIM3-208ENST00000512380 C1orf216Q8TAB5 229 aa10.04□□□□□ -0.8
PDLIM3-208ENST00000512380 CHMP4AQ9BY43 222 aa10.04□□□□□ -0.8
PDLIM3-208ENST00000512380 ERBB4Q15303 1308 aa10.04□□□□□ -0.8
PDLIM3-208ENST00000512380 PRMT3O60678 531 aa10.03□□□□□ -0.8
PDLIM3-208ENST00000512380 PLPP7Q8NBV4 271 aa10.03□□□□□ -0.8
PDLIM3-208ENST00000512380 TMPRSS4Q9NRS4 437 aa10.03□□□□□ -0.8
PDLIM3-208ENST00000512380 CEP126Q9P2H0 1117 aa10.03□□□□□ -0.8
PDLIM3-208ENST00000512380 LILRA1O75019 489 aa10.02□□□□□ -0.81
PDLIM3-208ENST00000512380 ADH1AP07327 375 aa10.02□□□□□ -0.81
PDLIM3-208ENST00000512380 GMPRP36959 345 aa10.02□□□□□ -0.81
PDLIM3-208ENST00000512380 RAB15P59190 212 aa10.02□□□□□ -0.81
PDLIM3-208ENST00000512380 SF3A1Q15459 793 aaKnown RBP10.02□□□□□ -0.81
PDLIM3-208ENST00000512380 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.02□□□□□ -0.81
PDLIM3-208ENST00000512380 GLYCTKQ8IVS8 523 aa10.02□□□□□ -0.81
PDLIM3-208ENST00000512380 EGFL7Q9UHF1 273 aa10.02□□□□□ -0.81
PDLIM3-208ENST00000512380 EML3Q32P44 896 aa10.01□□□□□ -0.81
PDLIM3-208ENST00000512380 AGBL1Q96MI9 1066 aa10.01□□□□□ -0.81
PDLIM3-208ENST00000512380 BCL11AQ9H165 835 aa10.01□□□□□ -0.81
PDLIM3-208ENST00000512380 PCDHB9Q9Y5E1 797 aa10.01□□□□□ -0.81
PDLIM3-208ENST00000512380 LZTS3O60299 673 aaPredicted RBP10□□□□□ -0.81
PDLIM3-208ENST00000512380 ICMTO60725 284 aa10□□□□□ -0.81
PDLIM3-208ENST00000512380 CLDN10P78369 228 aa10□□□□□ -0.81
PDLIM3-208ENST00000512380 ZNF592Q92610 1267 aa10□□□□□ -0.81
PDLIM3-208ENST00000512380 PRIMPOLQ96LW4 560 aa10□□□□□ -0.81
PDLIM3-208ENST00000512380 ASB16Q96NS5 453 aa10□□□□□ -0.81
PDLIM3-208ENST00000512380 DNAAF2Q9NVR5 837 aaKnown RBP10□□□□□ -0.81
PDLIM3-208ENST00000512380 STK17AQ9UEE5 414 aa10□□□□□ -0.81
PDLIM3-208ENST00000512380 PPFIA3O75145 1194 aa9.99□□□□□ -0.81
PDLIM3-208ENST00000512380 ERCC5P28715 1186 aaPredicted RBP9.99□□□□□ -0.81
PDLIM3-208ENST00000512380 MCCD1P59942 119 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms